Spip008560.1
Basic Information
- Insect
- Syritta pipiens
- Gene Symbol
- F54F2.9
- Assembly
- GCA_905187475.1
- Location
- LR994571.1:11574521-11576391[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.3 6.4e+03 -2.5 0.2 3 12 19 28 18 36 0.83 2 3 2.8e-07 0.00042 20.5 0.0 4 38 302 339 299 340 0.87 3 3 1.6e-09 2.4e-06 27.7 0.5 3 43 388 433 386 435 0.89
Sequence Information
- Coding Sequence
- ATGATATCCTGTATTAGATATATTCTTCTATTAAGTCTCATTTATGGCGTGCAATCATGGGACAAAGACGAATTGGAAATATTCGATTTAGTCGAAGAGATCAATCGAAACTTTTATGAGCTTATGGGAATACCACAGGAAGCATCAGGTCAAGATATAAAACGTGCATTTCGAACCTTATCCATTGTCCTGCATCCTGACAAAAACGATGCCGACGATGCTAACATTCAATTTAGAAACCTTGTATCGGTCTATGAGGTATTGAAGGACCCCTCGAAAAGAGAGAAATATAATAAAGTCCTCAAAGATGGTCTACCTAATTGGAAATCTGCTCTATACTATTATCGGCGAATGAGAAAAGTGGGGCTTTACGAAGGCTCGCTAATCATTTTTGTAATCATCTCCATTGGGCAGTACTTGTTCTCGTGGGCGGCGTATCTTGAGAAGAAATACACTGCCGAGCAGGTGATTGGATCGAAATTGAAGAAACTCCAAAAGAAAAATAAAAATTTGGATCTAGACGCCATATTGAATGAAATTCCGATACCGTCCATATTGAACACGCTGCCATTTCAAATTCCGATGTTTTTCTGGAATCTCCCGTCAACCATAAAGTCAGCTGCTCAAAAGGCAAAGGAGCTAAAGGAAGCAGCACAGGAGAAGCGAAGATTGGAAGTTGAAGAGTTGAAAAGGCAGCAAGAGCTAGAAGAAGAAGCCGAAGAAATGGCACGATGGCGAAAAGAAAAGAAGGCGAACATTCGTAAACGTAGGGAAGCGACAAAAGCACCAGAAAAAACTGATGCTGAGCTCGCTGGCTATTCCCAAATACAGGCAAAGGGCATAAACGAAAGCGATGCCATCAAACCCGTCCAACAAAAGGCCACACCACTAAGCGGAGGATTTTGGAGTGATGAAGATTTAGCCGAACTTATTCGTCTTGTTAAGAAATACCCAGGTGGTGCAAGCAGCCGGTGGGAAACTATAGCAGAAGTAATGAACCGTTCGGTGCAAGAGGTCACCTTCATGGCAGCTAAAATGAAAGAAAACGGTTATCGTGTACCCGGGCAGACAGACAGTGTGGCTGAAACCATCATTCAGGAGTCTAATGTTAAAAAAGAAAAGGTCAAGAAGACCGATTCAACAATTCTTGTTCCCGAAACAAATTGGTCACAAGAGCAGCAACGTGCCTTAGAATCAGCCATCGTGAAATATCGGAAAACGGCCAACGCAGATCGCTGGCAGAAAATTGCCAACTGTGTTCCCGAAAAAACCAAAGAAGAATGTCTCCTTCGGTATAAATACCTCTGTGACTTGGTCAAGTCACAAAAGAGTAAATCAACTGAAGAAGAAGTCGCTGAGGCGACCACTGTTCAGGCGGCAGCCCCGGAAACGAATCAACAAGTAGGAGAAGAAGTCGAAGAGGAGGATGATGTTCAGGCTGACGTAGATGATGAAGATGAATTTAAAGAAGTCGTAGACGAACCAATTGCGACTAAGGGCAAACGACGAAATAAGAGAAAAGAACGAAAACGAAGAAGAGATTTTTCCAGCGATGAGGACTCGGACGATGTTTAA
- Protein Sequence
- MISCIRYILLLSLIYGVQSWDKDELEIFDLVEEINRNFYELMGIPQEASGQDIKRAFRTLSIVLHPDKNDADDANIQFRNLVSVYEVLKDPSKREKYNKVLKDGLPNWKSALYYYRRMRKVGLYEGSLIIFVIISIGQYLFSWAAYLEKKYTAEQVIGSKLKKLQKKNKNLDLDAILNEIPIPSILNTLPFQIPMFFWNLPSTIKSAAQKAKELKEAAQEKRRLEVEELKRQQELEEEAEEMARWRKEKKANIRKRREATKAPEKTDAELAGYSQIQAKGINESDAIKPVQQKATPLSGGFWSDEDLAELIRLVKKYPGGASSRWETIAEVMNRSVQEVTFMAAKMKENGYRVPGQTDSVAETIIQESNVKKEKVKKTDSTILVPETNWSQEQQRALESAIVKYRKTANADRWQKIANCVPEKTKEECLLRYKYLCDLVKSQKSKSTEEEVAEATTVQAAAPETNQQVGEEVEEEDDVQADVDDEDEFKEVVDEPIATKGKRRNKRKERKRRRDFSSDEDSDDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01522580;
- 90% Identity
- -
- 80% Identity
- -