Spip018516.1
Basic Information
- Insect
- Syritta pipiens
- Gene Symbol
- SNAPC4
- Assembly
- GCA_905187475.1
- Location
- LR994572.1:69252251-69254625[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.94 1.4e+03 -0.4 0.0 22 46 238 264 228 264 0.80 2 5 2.4e-11 3.6e-08 33.5 0.2 1 44 270 314 270 316 0.94 3 5 7.3e-15 1.1e-11 44.8 0.2 2 43 326 371 325 372 0.94 4 5 2.7e-10 4.1e-07 30.1 0.0 4 44 383 424 380 426 0.88 5 5 8.7e-15 1.3e-11 44.5 0.1 3 43 434 475 433 477 0.96
Sequence Information
- Coding Sequence
- ATGGCCCACACGAAGGCTAACCACAAAGGTTTAAAGCGCGAGAATAACAGTGACTGTGAAACGACCGATGATAGTGACAAGAGCTACATTGGCGAGGATAAAGACAGCGACGATTGTGATAGCGATGAGAGCGGGAGTGATTCTGATGGCGAAAGCAGCGACCAGGCGGATAGCTTCTTACTGGAAGCAAGTACCGACTATATGGCCGAGGCAGTGAAAGTGCTGGAGAAGCATGCAGAAGTCGGCTGTGAGAATGCCATTATCCTGAACCGCAAGAAGCAGGACATGTTGGTTGAGCTTCGAAGAAAAGTGTTATCGATGATGAGCAAGTGCCGGAAGAAGTATGTGGAAAACCAGGCGAAGCTGGCAAATCCATCGCATGCCACCTCATCGCTGAGGGGTATTGGGAGTTGTGGCGCTCCCTTTTTTAAAGACATATGTGGCAAACGCTGTCCGCCAAACGCAGACTACGTTTATCGGCGGGAAACTGAGAAAGAACTCTTTCCCATCGATCTGGAACTATTCCCGCACTTTGTTTGGACGGCTACTGATAAACTGGGAATTCTGCAGGGAATTAAGGAGCAGGTCATAGAACACATGGAACGGAAAACATCAACCACATCACGGCCAACGAAACTGAGTAGGAATGTCAAACTCCACTCGCTGGCGCTGAAGGAGCTCCTGGGCACGGTGGACGAGGAGTTTTCGATTGACTGGAATCAAATATCCGTCCACAACTTGAAATCCCGCCACACGGCAAATAGTTGCTTTGCCATTTGGAATGTCTACCTCAAGCCGGAGATCAACCGGAACGAATGGACGGAGGAGGAGAACTTAAAACTAAACAGACTCGCAAAAAAGTACAAGTTCCAAAACTGGATAGCCATTGCCGACGAAATGGACGGCCGGTCAGATTACCAGTGCTTTGTTCAGTACCAGACAGTTGTGGCGATTGTGATGCGGGAGGACAAGGGTGAGCGCTGGACCAAGGAGGAAGATCTTCTACTCCTCGATCTTGTGGAAAAGCACCGTAACGGCAATGTGATACGATGGAACCCGATTTGCTCGCAACTGCCAAACCGCACGAAGAAGCAGTGCTTCGCTCGGTATAAGTACAGCATCAATCCGTCCATCTCACGAGCTCTTTTCACAGCCGAAGAAGACTGCATCATCCTGGCAGCCGTCGAGGAATATGGAGAAAACTTCAACTGCTTCCCCAAGGCATTGTTTCCCAATCGGACCGTTGTCCAAATCCGCAACAGGTACTACAACTCGTTAAAGCTTCGGGAAAATGTCCGCTCATGGACACCGGAGGACGATAAAATCCTGCTCCACCTAGTGGCCAAACACGGCAGTCACAGCTGGAAGAAAATCGCCGACGATATTAAGCGCCATTCCCGTACAAGCTGCCGCACTCGCTTCTTGGTGATTTCCAGATTCCTGAAGGAAAATCCCAATGCCACCATTCAGGATCTGCCGCGGAAGAACCGTGGTCCCCTGTCGAACGTAACGAAGGGCAACTGGATGAACAAAATCGCAGAGATCCGACAGAATCCGAATGGGTTAGACCGATCCACGTCTTCGAGGACACACCGGAACAAGAGCTACCGCTCTCGGTTGCGGAACAACGAGCTGAAGTGGTACAACTTCTTCAAGTACGCCTACGACTTCTCGTTCGGCAGCGGGTACAGCCGAGTTCCGGCCTCCATGAAGAGTCTCGAATTCGTGAGAGTCGCCCTTGATGCTCACATTCAACTGCCGATAATCCTGGAGAAGCCTTACAGCACGGGTGTGGTTCGGGTGAACTTGGAGAAACTCGCACGAGTGATGGAAGAAGACAATAAGCGCAATGTCAGTGACCTGCCCACGGTGAATTACCCACTACCTCCGAGTTATTGCAGTCTCCTGGGATTCCGGGGGCTTTGTATACTCACGTCAACCCAAGAAGCCGAATCGACCTCAACCGCGATTGAAACGCAGTCGGACGAAGTCCTCGCGGCGAAAGAGAAATTCCGCCAGCGGCTGTTCAGTGTGTTTTACAAAACAACGCTTCTCAGCCGCTTAGACCCCGACCAATGCGTAGAGCGGACAAACTTTGAGATCGTTTTCGATGCTAAAACCGTCTCGAGACGAACGAATTTGGTGCCTGAGACAAACTCAATCACGGAGTACATCACAACGTTGCCAAGGAACACAAAGAGGCCACACGAAGAAGATCCAGGGAACACCTTCCCCACGAACAAACAACCAAAAATATAA
- Protein Sequence
- MAHTKANHKGLKRENNSDCETTDDSDKSYIGEDKDSDDCDSDESGSDSDGESSDQADSFLLEASTDYMAEAVKVLEKHAEVGCENAIILNRKKQDMLVELRRKVLSMMSKCRKKYVENQAKLANPSHATSSLRGIGSCGAPFFKDICGKRCPPNADYVYRRETEKELFPIDLELFPHFVWTATDKLGILQGIKEQVIEHMERKTSTTSRPTKLSRNVKLHSLALKELLGTVDEEFSIDWNQISVHNLKSRHTANSCFAIWNVYLKPEINRNEWTEEENLKLNRLAKKYKFQNWIAIADEMDGRSDYQCFVQYQTVVAIVMREDKGERWTKEEDLLLLDLVEKHRNGNVIRWNPICSQLPNRTKKQCFARYKYSINPSISRALFTAEEDCIILAAVEEYGENFNCFPKALFPNRTVVQIRNRYYNSLKLRENVRSWTPEDDKILLHLVAKHGSHSWKKIADDIKRHSRTSCRTRFLVISRFLKENPNATIQDLPRKNRGPLSNVTKGNWMNKIAEIRQNPNGLDRSTSSRTHRNKSYRSRLRNNELKWYNFFKYAYDFSFGSGYSRVPASMKSLEFVRVALDAHIQLPIILEKPYSTGVVRVNLEKLARVMEEDNKRNVSDLPTVNYPLPPSYCSLLGFRGLCILTSTQEAESTSTAIETQSDEVLAAKEKFRQRLFSVFYKTTLLSRLDPDQCVERTNFEIVFDAKTVSRRTNLVPETNSITEYITTLPRNTKRPHEEDPGNTFPTNKQPKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -