Spip016298.1
Basic Information
- Insect
- Syritta pipiens
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905187475.1
- Location
- LR994572.1:30155216-30180166[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.55 1.2e+03 -0.6 0.0 25 39 83 98 82 101 0.85 2 3 3.5e-14 7.7e-11 41.7 0.1 1 44 333 377 333 378 0.90 3 3 9e-19 2e-15 56.4 0.0 1 43 832 875 832 877 0.95
Sequence Information
- Coding Sequence
- ATGGCTGGCTTAGAACGGGTTGGTGAGGAGTTGATGGGACTCAGGAAATGGAAGCAATATCAAGAAGCTGTAACGCGATCCCAATTAAGTGCAGATATCAGAAATCTGGATCAAAACGATATTTCAAATCAGAAACACGAACCCGAACAAAAACTGGAGAAGGCCAAGGAAAATTCACATCAGCAGCAATCGCCGCAACAGCAGCAGCAAACGTTCGAAAACGACGTTCAAAAAATCAAAACCGAAGTGTTCGACGTGAGCGAAAGAACTTTGACTTCACCGCACATAAAAAGAGAAAACTGCGAAAGCAGTTCAGGAGCAACGGAGGAAAGCATAAAACTTAATAACAATACAACAAATACATCACATAAAAATAACAATAACAAAAAGGATAACGAGGAGCTGCACCAGCCGCTACCCACCACAAGTCCGCAAACACCACCACCACCAGTACCGATCGACTGGACACCGAATGAGAAGTGTAATTTTTGTGTTGACGGTAAACTGCTCACAGTGAACGAGAAGGGTGAATTAGTGGCTGAGTCGAGCCCGGCTCTGTCCGAGGCAGACCTCGCCAATAGACCACCAGGAGATACGGACAGTGACTCTAGTGATAGCGTCGTGCCGGATACTAGGGTCAATGCGAGTAAAGTACTAACATCACGCTTTAGAAATTTAGTTCCATCGAATATGACCTCATTGCAGTCGATGGCAGCACAAGCACAATGGCTACAGACAGGCTTAGGGCAATTTTGTCCAAACATATTGTACAATTTAACTCAGCATTTGAGCTCAGCCACACCAACTACCTCAGAGACATCGGCCGCCGCTATAAGTCCCTCACTCAAGGATTCTCCCAGTCCCAGTGATTTAACGGGTGAACAGCCATTAGATCTTAGTTCAAAACCATCACCAAATTCCTCAATCGGTGGAGATGCCAGACATGTGAACAGAGCGAAACCCCGTGTGACAGCGTGCACCGGCCGACGCGGCTACACCGAGCAATCACTGAACAATGCTCTGCAGGATATCATGAGCGGCAAGCTTGGTACCCGTCGTGCAGCGGTCCAATACAACATTCCGCGTTCGACGCTGCGCAATAAGGTGTACAAAATCTCATCGGGGGCGAAGCGTGAGACTCCCTCATCACTACATCACCTGGCCAGTCTCGAAGACCTGGCCGATGTCGACGATGACAAGCAAAATTTGTCAGCCGACGAAGAGGATAGCAGCGGCGAGAAGCTTCTAGGCAGTTCCTTGGCGTCAGATGCGGGCGACGAGTTAAGCAGCCGTTTCGGCGATGCCAACCTCGCAGCGAACATTCAAAAATTGTGTGCTGAGCACAACAGTCTGGCGTCACAACACCTGCAGCCGCAACACGCTGACATGCAGGCCCATAACAAGCCGACAACATCCCTGGAATCACAGCCGAAGCGCAAGGCGTCAACGCCCCAACCTCCACCACCACAAACATCACCATCGCTGGCACAGGCTGCGTGGCCGAATGTCCTGCTGCAGACGCTGCTGCTCTCGGGCAGCAGTCTTCCCATGCAACCGAACATCGAGGAAGCTTTACAACTGTTTAATGCGCTACTCTTAAAGCCGGATCCAAACTTGATTAATCCCCAATTTCTGATGCAACTGCAGCAGGCCCAACAGTCGCCACAGTCAGCGCAGCAGCACCTGGCGCAACAGCAATCCCAGCAACAGCAGATGCAACTGCACGCGAACGCGACCGGACACCCGGCGACAGTTGCGTCATTTCAAAATCGTCAACCAAAGTCTGAAACACCAGAAACAGCATCTTCAGTGGACCTGAATGAGGCGCTAGGTGATGATCCATCAACTCATATTCTAAGAATTCCGTCCTACAAACCGGTAGCTGGATCCTCAACGTCATCAACATCTTCAGCTGCAGCGGCGACGGCGGCAGCTCTGTGCAACAACAAGAACGGTGAAAGTTTGCCAACGAATTCGCCAAAAATTCCCACAGCGTCGTCTCTGTTGGGCGCCAATACCTCAACACCACAACTGCATCACCATCATCACCTGCATCCACATCACAACCCAGCGGCATCAGCGGCCAACAACATCCCGGGCATATCGCCACCCTTGATACGCCACACCAGCGGTGAGTCGCAGTCGCCACCAACGCTCTCGCTGCGCGACATGATCGCCAACAGCATCAGCCGCAACTTTAGTCAGCAAGCTAGCAAAGAAGCCACCAGCCCGAGTCCCGCGCACTCAGCGTCCGCATCAGCGATGGATCACAACGACCAGTACAAACGGCCCAGCATATCAGTGATCAAGAACATCGGAGGTACGGACACCTCGCGCTTTGCGACCGCCCCAAACATCCTCGGCAGTCACCACAACTCCAACCACCACCACCAGCAGCACCATCACCATCAGCATCACAGCCAGAACGCGGCGAACAACAACCTGGCCGGCGGCAAGGGAACGCGGCCCAAGCGCGGCAAGTACCGCAACTACGATCGCGACAGCCTCGTCGAGGCAGTCAAGGCCGTGCAGCGCGGCGAAATGTCCGTGCACCGAGCCGGCAGCTACTACGGCGTACCCCATTCGACGCTCGAGTACAAGGTGAAAGAGCGCCATCTGATGAGGCCGCGGAAGCGTGAACCCAAACCACAACCACCTCTTGACGACCGAACGGGTGGCAGCACCTCGTGCGGCAACTCCGGCTCCTCGGCGAACACCTCAAAGAACTCAAACATTCCAAGTCTCTCGGCTGTAAATAGTTTAGATAAATTGAGTAAGAACAGCGGCGCTGCGGGCACTAGTGCCAACCAGAAACAGGCGGCCGCTGGCAAGAGCAACCCACCATTCCCCACAACATCGCCGAACGGCATGAAGCTGCCACCTGCGTTCTTCGACCAGAGCCTCAGCGCCCAGCTGCCATACCCGATCCTCTGGCACGGCGGCTTCAGCTCGCTGCAGATGGATCTCAGCTCGCGGTCCGCGGCGGCAGCGGCTGTTGCCGTGGCGGCTGCAGCTGGTGGGGCTCCCGGGAACCCGTACTCCGCCGCGAACGCCGAACTATTCAACTCCCAAATGCTGCAGAGATTCCGCGAGGAGCGTGGGCCGCCAAACGACATCAGCAGCCCCCCGGGACCGGCGGCTCTCAGCAACTCAAGCCCCAGCACTACCAACAACAGCAAGAGTGTGCGCGAGATCGCCGAGAACCTCTACGACACCAGCGGCGCGAATGGTTCCTTCCTAGACGGCATCATACGCAAAACCCTCGACCGTAAAAGTTCCGACATAACACAAGGCGCCTTACTCGACCAGCTGGTGAAGAACAACAAGCCTCCTCCGCCACGCCTCATGCTGAACAACGAGCGCTCGCCCGGCGGCGAACTCCTCAAGCTCAAGCGCTCCGGCAGTCCGATGCAGTACCACCCCGGGATCGAGATCAAGCGCGAGCGCGCCAGCCCTTCGTCGGAGTCTTCGAACAGCGACTCGGAGCGCAACCATCGGCGCGACTCTGACTCGGAGCCGCCATCCCAGCGTCACCCTGGCCTCCACCACGCCCTACTCGGTGCTAGCACCGACCTCAACGGCGCCCCCCACAGCTTAGTTTCAATGCCGACCGGGAATAGCCTGACCGCCGCAGCTGCTGCCGCCTCCTCGGCATCATCCGCGGCCGTTTCCACCAGTATTCTGCAAGAAAAGTTGGGGCAAATCAAGTCCGAGACGGAGGATAGTTTATAG
- Protein Sequence
- MAGLERVGEELMGLRKWKQYQEAVTRSQLSADIRNLDQNDISNQKHEPEQKLEKAKENSHQQQSPQQQQQTFENDVQKIKTEVFDVSERTLTSPHIKRENCESSSGATEESIKLNNNTTNTSHKNNNNKKDNEELHQPLPTTSPQTPPPPVPIDWTPNEKCNFCVDGKLLTVNEKGELVAESSPALSEADLANRPPGDTDSDSSDSVVPDTRVNASKVLTSRFRNLVPSNMTSLQSMAAQAQWLQTGLGQFCPNILYNLTQHLSSATPTTSETSAAAISPSLKDSPSPSDLTGEQPLDLSSKPSPNSSIGGDARHVNRAKPRVTACTGRRGYTEQSLNNALQDIMSGKLGTRRAAVQYNIPRSTLRNKVYKISSGAKRETPSSLHHLASLEDLADVDDDKQNLSADEEDSSGEKLLGSSLASDAGDELSSRFGDANLAANIQKLCAEHNSLASQHLQPQHADMQAHNKPTTSLESQPKRKASTPQPPPPQTSPSLAQAAWPNVLLQTLLLSGSSLPMQPNIEEALQLFNALLLKPDPNLINPQFLMQLQQAQQSPQSAQQHLAQQQSQQQQMQLHANATGHPATVASFQNRQPKSETPETASSVDLNEALGDDPSTHILRIPSYKPVAGSSTSSTSSAAAATAAALCNNKNGESLPTNSPKIPTASSLLGANTSTPQLHHHHHLHPHHNPAASAANNIPGISPPLIRHTSGESQSPPTLSLRDMIANSISRNFSQQASKEATSPSPAHSASASAMDHNDQYKRPSISVIKNIGGTDTSRFATAPNILGSHHNSNHHHQQHHHHQHHSQNAANNNLAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPPLDDRTGGSTSCGNSGSSANTSKNSNIPSLSAVNSLDKLSKNSGAAGTSANQKQAAAGKSNPPFPTTSPNGMKLPPAFFDQSLSAQLPYPILWHGGFSSLQMDLSSRSAAAAAVAVAAAAGGAPGNPYSAANAELFNSQMLQRFREERGPPNDISSPPGPAALSNSSPSTTNNSKSVREIAENLYDTSGANGSFLDGIIRKTLDRKSSDITQGALLDQLVKNNKPPPPRLMLNNERSPGGELLKLKRSGSPMQYHPGIEIKRERASPSSESSNSDSERNHRRDSDSEPPSQRHPGLHHALLGASTDLNGAPHSLVSMPTGNSLTAAAAAASSASSAAVSTSILQEKLGQIKSETEDSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -