Spip011870.1
Basic Information
- Insect
- Syritta pipiens
- Gene Symbol
- kn
- Assembly
- GCA_905187475.1
- Location
- LR994571.1:65433537-65439984[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-119 1.1e-115 387.3 0.0 205 385 1 210 1 213 0.99 2 2 1e-10 9.9e-07 27.5 9.7 422 500 213 293 210 298 0.79
Sequence Information
- Coding Sequence
- ATGCGACGATTTCAGGTTGTGATATCAACGCAAGTGACAGTTGATGGCCCGCTCTTAGCTATTTCTGATAACATGTTTGTCCACAATAATTCGAAGCATGGCCGTCGCGCAAAACGGATGGACGCCACGGAAGGTACAGGAAATTCTCCCCTGTCCATTTCGGGTCACCCCCTTGCGCCTGACAGTACCTATGATGGACTCTATCCGCCGCTCCCAGTTGCGACACCCTGCATCAAGGCGATATCCCCCAGCGAGGGTTGGACCACCGGCGGCGCCACCGTCATCATTGTCGGCGATAACTTCTTCGACGGCCTTCAGGTTGTCTTCGGCACGATGCTGGTCTGGAGCGAGCTTATCACATCGCACGCCATACGCGTCCAGACGCCGCCGCGGCACATACCGGGCGTTGTGGAGGTGACACTCTCCTACAAGAGCAAGCAGTTTTGCAAGGGATCACCAGGACGATTCGTCTATGTTTCAGCCCTCAACGAGCCGACGATAGACTACGGCTTCCAGCGGCTGCAGAAGCTCATCCCCCGCCATCCGGGCGACCCGGAAAAGCTACAGAAAGAGATCATCCTCAAACGTGCCGCCGACTTGGTCGAAGCGCTCTACTCCATGCCAAGATCTCCCGGAGGCACGACTGGATTCAATTCGTACGCGGGCCAATTGGCCGTCAGTGTTCAGGATGGAACTGGTCAATGGACCGAAGACGAGTACCAGAGGGCGCAGAGCAGCAGCGTGAGTCCACGTGGCGGCTACTGCAGCAGCGCCTCGACGCCGCACTCGTCGGGCGGCTCCTATGGGGCCACTGCAAACGGCTATGGACCGGCACCGAACATGGGAGCGTTGTCATCGTCGCCCGGCAGTGTATTCAATTCCACATCGAGTGAGTAG
- Protein Sequence
- MRRFQVVISTQVTVDGPLLAISDNMFVHNNSKHGRRAKRMDATEGTGNSPLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGTTGFNSYAGQLAVSVQDGTGQWTEDEYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATANGYGPAPNMGALSSSPGSVFNSTSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01116233;
- 90% Identity
- iTF_00642950;
- 80% Identity
- iTF_01395579;