Basic Information

Gene Symbol
tfcp2
Assembly
GCA_905187475.1
Location
LR994573.1:48151354-48172478[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-64 1.9e-60 204.0 4.6 17 222 345 569 326 570 0.88

Sequence Information

Coding Sequence
ATGGCTCTTTCGCTTCTTTCACATCCAAATTTTGCGGAATTACAATCATTCCTTGATCCACTACGTTCTACTTTTGATTTTTCTTTTAATACCGATCAAATGGAATACAGCAGCAATAACAGTTCTACAATTAATCAGCATCTAACACACAACAACACCAACAACAATCGCAATTACAACTTTCAATCAAATCAATCACAAAATGCATATAACAACGATTACGACCAGGTGATCAATTTTGTTGACTCCCCACCAAACTCTGAAGAATCGTGGACAGACGAACAACACCAGCAACAACAGCACCAACAAACATCGAAGAATTCTCCAGCAGGACCCACAATAATTGATGTTCAAACGATCTACGGACAACAGCAGCAACAGGCAGCAGCGGCAGCAGCAGCAAGTGGACAACGCAAAAGGCGAATGGATTGGAACTCTCTTGAACTCAGCCAAAATGGTAGCACCAATGGCGCTAATGCACAGCCCACAGCATCCAAGATTCCGAATCTAACAGGCGAAAATGCCAGCGACAATAACTCCATTGCCGTAAGCAAGGAGAAGGAGAAGAAGAAACTCTCCTCCACCGGCAACGCCAATGGCCGCGAAGGTTGGCCCGACGACATTGATTTTGATTTAAATGCCGAATTCAACAGCAACGCATATTTGAACAATGAATCCTTTCTTTCATTTTCCCCAGCACTGACCGTGCTTAAACAGGAGATTCACTCCCCACACGCCGATCAACTCAAGGGCAGCAAGAGTCCCCTAAATCCAGTCAACCAGGAAAACTCCCGCAGTTCTGACAATCATGATGCTGATCATCCGCCCAACGGAGCCGCTGGTGGTAGTGGAAACTCGGTCGACATAAATGAGTCCAATGCACCGTGCAGATCACCCCAACAGTTGACCACCAAGTCGAGTTATGATAATTCGAAAACAATTTCGGGCAACGGATTCAGTGTCAATCATCACCACAGTGACAGCAAGCAGGTTCAAAACGCACGCAAGAGCCCAGTTCTGCCACATGTCGAATCATCGAAGACAGACAACTCCCAAGCAGAGGATTACAAATTCCAGTACATTTTGGCTGCGGCTACATCGATTGCAACGAAGAACAACGAAGAGACGCTTACATACCTGAATCAGGGACAGAGCTATGAAATCAAATTGAAGAAAACCGGTGATCTCTCATTCTATAGGGATAAGATTTTGAAGAGCGTCATCAAAATCTGCTTTCACGAACGTCGCCTTCAGTACATGGAACGTGAGCAAATGCAACAATGGCAAGCATCACGTCCAGGTGAAAGGATCATTGAAGTTGACGTTCCATTGTCCTACGGCTTGTGTCACGTATCGCAACCGTTGAATCCGAACTTTTTAAACACTGTTGAAGTTTTCTGGGATCCCCTTAAGGAGGTTGGTGTCTACATAAAGGTCAACTGCATCTCGACAGAGTTCACGCCAAAGAAGCACGGAGGCGAAAAGGGCGTTCCATTCAGAATACAAATTGAGACGTACATAGAGAATTCAAATAATTCACCAGTCGGTGACAGTTCGACAAATTGCAATAACTTGGGCGGAGCCAGTGGTGGTCCTCTTGGAAAGCAACCAATTCATGCGGCAGCCTGTCAGATTAAGGTTTTTAAATTGAAAGGAGCCGATCGAAAGCACAAGCAGGATCGCGAGAAGATCCAGAGACGGCCACAGTCGGAGCAGGAGAAGTTTCAACCGAGCTATGAGTGCACCATCATGAACGATATCCCATTGGAATCATTGACCCCCGCAGGGGGTTGCTACAGCCCTGAATACATGAAACTTGCATGGCCAAATTCACCAGTTCACATACCAAAATACGATGGGATCATTCCCTATGCCAATGTATCGCCAGCTGCCAATTCTAGCCCGATAGCAATTAACAGTGTAACATCGACGAATACCAACAATTTGAAACTAATGGATGCTAACATGGTGTCACCACAACAGGTGGAAATGGATGATTATCAATTGGCAAATATTATGGCTGAGACTACACCAGCTCAGGTTACACAATGGCTAACTCATCATCGACTAACAGCGTATGTGTCCACATTTGCACACTTTTCCGGTTCAGACATTTTGCGGATGTCCAAGGATGATTTAATTCAAATATGCGGTCTTGCCGATGGTATTCGCATGTTCAACATTCTCCATGCCAAAGCCATTGCACCACGTCTTACCATTTACGTTAGCCTTGACGGCAACAGCTACAATGCCATATACCTAACTTCGAGCTTTGCCAAGGAACTAACTCAGAAACTCTTCAAACTCCCAGGATTCTATGAGATGAGCGCTGGAAGCTCCAGCAACATAAATGGAACCGTTGATGCTGGTGGCTATCCTAGTTGGGGCATGCAATCAAAATACTCAGGAAGTGGTTCAAACATTTATAACGATGCATCTAAAACTCCGATTTACATAACCGGACCTTCCGGTGTTCACGTCACCATCACTGATGAAGTCCTTAACAATGAAATTAAAGATGGAAGCCTCTATGCACTTGAAGTACAAAATGGAAAAGTACTTATGAAATCAATTAATAAAAATGATAATTAA
Protein Sequence
MALSLLSHPNFAELQSFLDPLRSTFDFSFNTDQMEYSSNNSSTINQHLTHNNTNNNRNYNFQSNQSQNAYNNDYDQVINFVDSPPNSEESWTDEQHQQQQHQQTSKNSPAGPTIIDVQTIYGQQQQQAAAAAAASGQRKRRMDWNSLELSQNGSTNGANAQPTASKIPNLTGENASDNNSIAVSKEKEKKKLSSTGNANGREGWPDDIDFDLNAEFNSNAYLNNESFLSFSPALTVLKQEIHSPHADQLKGSKSPLNPVNQENSRSSDNHDADHPPNGAAGGSGNSVDINESNAPCRSPQQLTTKSSYDNSKTISGNGFSVNHHHSDSKQVQNARKSPVLPHVESSKTDNSQAEDYKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKTGDLSFYRDKILKSVIKICFHERRLQYMEREQMQQWQASRPGERIIEVDVPLSYGLCHVSQPLNPNFLNTVEVFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRIQIETYIENSNNSPVGDSSTNCNNLGGASGGPLGKQPIHAAACQIKVFKLKGADRKHKQDREKIQRRPQSEQEKFQPSYECTIMNDIPLESLTPAGGCYSPEYMKLAWPNSPVHIPKYDGIIPYANVSPAANSSPIAINSVTSTNTNNLKLMDANMVSPQQVEMDDYQLANIMAETTPAQVTQWLTHHRLTAYVSTFAHFSGSDILRMSKDDLIQICGLADGIRMFNILHAKAIAPRLTIYVSLDGNSYNAIYLTSSFAKELTQKLFKLPGFYEMSAGSSSNINGTVDAGGYPSWGMQSKYSGSGSNIYNDASKTPIYITGPSGVHVTITDEVLNNEIKDGSLYALEVQNGKVLMKSINKNDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309981;
90% Identity
-
80% Identity
-