Basic Information

Insect: Syrista parreyssii
Gene Symbol: zfh1
Assembly: GCA_030142615.1
Location: JARQTG010000420.1:174827-186387[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.039 2.5 8.7 1.5 2 23 44 66 44 66 0.92

2 7 2.6e-05 0.0017 18.7 0.6 2 23 85 106 84 106 0.97

3 7 6.2e-06 0.0004 20.6 7.8 1 23 115 137 115 137 0.99

4 7 1.5e-05 0.001 19.4 1.9 1 21 143 163 143 164 0.95

5 7 9.6e-05 0.0062 16.9 4.2 1 23 614 636 614 636 0.94

6 7 3.6e-05 0.0023 18.2 7.2 1 23 642 664 642 664 0.98

7 7 0.0051 0.33 11.5 4.6 1 21 670 690 670 691 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.039	2.5	8.7	1.5	2	23	44	66	44	66	0.92
2	7	2.6e-05	0.0017	18.7	0.6	2	23	85	106	84	106	0.97
3	7	6.2e-06	0.0004	20.6	7.8	1	23	115	137	115	137	0.99
4	7	1.5e-05	0.001	19.4	1.9	1	21	143	163	143	164	0.95
5	7	9.6e-05	0.0062	16.9	4.2	1	23	614	636	614	636	0.94
6	7	3.6e-05	0.0023	18.2	7.2	1	23	642	664	642	664	0.98
7	7	0.0051	0.33	11.5	4.6	1	21	670	690	670	691	0.96

Sequence Information

Coding Sequence: ATGAGCATGACTCTCGTCCGCAACGCGTTCAAAGGGTGCAGCGAGGACGAGACAGGTGCCGATGCAGAGGTggctggtggtggtggcggcggcggagACGGAGATGGGGCATCGGCCAAGCAGGGAGAACGATGCCCCCAGTGTGGCATCCTCTGTCGAAACTTGCACGCCCTGCAGCTCCATCTCGAAGACACCCACAAGACGTCCTACTCCATCGACAAGCACGACCTAGGCGCTCAGTTCTCTCAAGTCTCGTGCAAGGTGTGCAGCAAAACTTTCGCCAACGTCTACAGACTGCAGAGGCACATGATCAGCCACGACGAGAGCGCTGTACTCAGGAAATTTAAATGTCCCCACTGCGAAAAAGCCTTCAAATTCAAACATCACCTCAAgGAACACCTACGGATTCACAGTGGGGAAAAGCCATTCCAATGCAACAATTGCGGCAAACGATTCTCTCATTCGGGTTCATACTCGAGTCATATGACTTCGAAAAAGTGCTTGATAGTTAACCTGAAGAAATCAAGGCAGAGCGCAATCAGTAACGTAGACAGAGCAGCCAAGAAATCCCAACAGCCACTGGAATCTCGTCGTGACGTTGATCTCCTAGTGGCGAACAATAATACTTTTCTTCCTATTCTACCGAAGCTTTCTCCTTCCGACTATCAAGATCTTCAGCGCGATGGAGGAGGAATCTACGATATGCCGACTCTACTACCTCAGATGATAGGATTCTCCAGCTACTTCCTACAGTCCTCCCTGGGCAAGATCCTGAATCAACTACAGTCGAAGAGACGCGACGAAGTGGCTGAACAGTTTGAAACAAAACGGGAAACAATGAGTCCCTCGACGGCGGATTCCGAAGGTACAGAAGGTACGGAAGGAAAGGAGTCACCAGCTCCAACGGACTCGCAAGGTTTGGACGGGGTCCGTCGTATCCTGGAGACCGTCAACACTTCCGTTACCAAGCAACTGCTTGAAGCCAATGTGAGAAAGTTGACTTCTTCGCCGGCAACGATAAAGCGAGAATATGACGAGGATTATCAGGATCAGGATAGTGAAATGTCTAGCGAAATGACGCACTATCCGGACTGGCCAGCGACGGATCAATACGATTCGCAGAGCGAAGGTCTAGCCGCTAAACTTGAGGACGCCAATCAGACGCCAATGTCCGCCAGGAAGAGTTGTAAGAGAAAGGCAGACCTGGAAACGATGGTAGAGACCTCTGAGGCGGATACtgatgacgaggatgagggTAGCCAACCGCAAGGTGACTCTGGAAGAAGAGTTAGGGCCAGGTCGCTAATTGATGACGCGCAATTAGCTGTTCTCAAGGGTTACTATGCGATCAATCCTCGACCTAAAAAGGAGGAGATTACCATGATTGCTAATTACATTAACTTTCCTACACGTGTCGTTCAGGTCTggtttcaaaattcccgcgcAAGGGATCGTAGAGAATCCAAGATACCGGCTCTGGTGCCCTTACCGATCTCAGGGTGTCAAACGATCATCGAACAGCCACTGGATCTTTCGAAGAAAGAGCTGAGTATCTCGGTGGTTAAGGACAGTGATACCTCAAGTAGAAACACTGCGTCTCCCTTTGGTCCAAAGGAGGACAATCCGGTATTGCCGAATCCGGAAGCTGATGACCTTGAAGATTCTCCCTTGGTGATTGACGAAGAGACGACTGATTCTGTGGAAACTAGGCAGCAGCCTACTATTGGCGATGTTGCTATCAAGTCACAGAGTCAGTCACAGACCCAAATAAAGAACGAGAGTGATGCAGTAGCTCGTGCCGATGTCCCGTCCACGGTAGAAGCTGAACAGGAAGGCCTCTACTTTTGCGACCAGTGCGACAAGACGTTTTCGAAGCACAGCTCACTCGCTAGACATAAATATGAACATTCCGGGCAAAGGCCGTACAAGTGCGTGGAGTGCCCGAAGGCGTTCAAGCACAAGCATCACCTGACTGAACACAAACGGCTGCACAGTGGCGAAAAGCCTTTCCAGTGCCGCAAGTGCCTCAAGCGCTTTTCTCACTCCGGCTCCTACAGCCAGCACATGAACCACCGTTACTCGTATTGTAAACCCTACAGAGAATAG
Protein Sequence: MSMTLVRNAFKGCSEDETGADAEVAGGGGGGGDGDGASAKQGERCPQCGILCRNLHALQLHLEDTHKTSYSIDKHDLGAQFSQVSCKVCSKTFANVYRLQRHMISHDESAVLRKFKCPHCEKAFKFKHHLKEHLRIHSGEKPFQCNNCGKRFSHSGSYSSHMTSKKCLIVNLKKSRQSAISNVDRAAKKSQQPLESRRDVDLLVANNNTFLPILPKLSPSDYQDLQRDGGGIYDMPTLLPQMIGFSSYFLQSSLGKILNQLQSKRRDEVAEQFETKRETMSPSTADSEGTEGTEGKESPAPTDSQGLDGVRRILETVNTSVTKQLLEANVRKLTSSPATIKREYDEDYQDQDSEMSSEMTHYPDWPATDQYDSQSEGLAAKLEDANQTPMSARKSCKRKADLETMVETSEADTDDEDEGSQPQGDSGRRVRARSLIDDAQLAVLKGYYAINPRPKKEEITMIANYINFPTRVVQVWFQNSRARDRRESKIPALVPLPISGCQTIIEQPLDLSKKELSISVVKDSDTSSRNTASPFGPKEDNPVLPNPEADDLEDSPLVIDEETTDSVETRQQPTIGDVAIKSQSQSQTQIKNESDAVARADVPSTVEAEQEGLYFCDQCDKTFSKHSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCRKCLKRFSHSGSYSQHMNHRYSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01198565;
90% Identity: iTF_01198565;
80% Identity: iTF_01395025;