Spar000908.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Syrista parreyssii
Gene Symbol
ZFX
Assembly
GCA_030142615.1
Location
JARQTG010000028.1:1242068-1246259[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.4 93 3.7 0.1 3 23 14 34 13 34 0.94
2 15 0.15 9.4 6.9 3.3 1 23 881 904 881 904 0.91
3 15 0.0021 0.14 12.6 4.5 3 23 986 1007 984 1007 0.95
4 15 0.0048 0.31 11.5 0.2 2 23 1019 1040 1019 1040 0.98
5 15 1.8e-05 0.0011 19.2 3.1 2 23 1043 1064 1042 1064 0.97
6 15 0.014 0.93 10.0 0.3 1 23 1070 1092 1070 1092 0.95
7 15 2.8e-05 0.0018 18.5 4.5 2 23 1099 1120 1098 1121 0.95
8 15 0.13 8.2 7.1 3.7 5 23 1134 1152 1133 1152 0.97
9 15 2.6e-05 0.0017 18.7 1.5 3 23 1159 1180 1158 1180 0.97
10 15 0.012 0.76 10.3 0.3 2 23 1196 1216 1195 1216 0.97
11 15 7.8e-05 0.005 17.2 0.7 1 20 1222 1241 1222 1244 0.92
12 15 9.6e-05 0.0062 16.9 2.7 1 23 1252 1274 1252 1274 0.99
13 15 0.0027 0.17 12.3 3.2 1 23 1280 1302 1280 1302 0.97
14 15 4.9e-06 0.00032 20.9 3.9 1 23 1308 1330 1308 1330 0.99
15 15 0.0005 0.032 14.6 7.0 1 23 1336 1358 1336 1359 0.96

Sequence Information

Coding Sequence
ATGGATCTCGGCGGCGCAGGTACTGGAGGGGCCGTGGCTTGCCCGGTCTGTACTCTTTACTTACGCGAGGGTATCAGCCTTCAAAGACATTTGGATACTCATCCCAAGGAACAGGTTATAGAGGCTCTCATTAAAGCTAGCGCTACTGTGCCTCCCTTAACGCAACCGACTTCACCCACGATAACACCTCCACAGACTAATCCACAAGTACCTACTACGGGCACTCATATACCTTCTCAGTCACCATACCCCATCGGACCAGTTTTTGAGTGTCCACCCATGGGTGCAATGGTACCACCACAGTTCGCTTCCTTTAGCTATCAGCAATTTGTCAATAATGGCACTATGATGATTCCACAATATGCCATGGCACCTCAGGCCAACCAGATGATGCAAATGTTGTACAATCCTTATGGCATGTATCAGCAACAGCAGATACCAACGGTACAAATGATTTCGCCCATAACAACCATTCCAACCACAACCCGGATTAGACCTGCTGTGTCAGTTGCTGGAGAGACTAATGGTAGGACTGTTACTGTACCTATGAACAACTCTGAATCTAAACACATTTTACCTGAAATTGTGCCAGAACCAGAAGCTGAAAGAGTGATACCAGATATAGATGTCCCAGAAACATCATCAGAAGAACAAACTCAAGACAGGCATGAAACAATTGAAGGTAACAGAATTCACATGGAACATAGAGGGCAGCAGACTCAAAATTCTACTTCTCAAGAGCAACACAGTAATCAACATGAATACCAAAGCGTTACACAATCTTTAACCATTGCATGTGAACATAACACATccgaagaagaaaagtcaCAAAGTGCATTGCCAAATGTTGATGAGGGTGATAATTCCGACGTAGTCCCAGTTGAAATGCAATGTAAGACAATTGAATACGAAGAGTCTGAAACCCAGCAGTACTCGCAAGGATATGAAAAGAATGTCActaaagataatgaaaatgatgttACACTGGTAGAAGTGAACATACAaatagaggaagaaaaattagatAGCCGACAAGTTTTAGAGAAGGATGaacaaaatgtaaatgaatCCACACAAGCAGAAGCTGCTTTAGACGAAGAGATGAAGGAATCAAGTCAACCGGAAGTAGAGCAATTAGAACGACTTCTTATCACTATTATGGAATCAGAGTTTAGTACTGTGCAGATGAAAGAACATAACGAACAAAGAGAGCAAAAAAATAGTGAAGAAAGGGCGATTATCGAACGAGAAAATACTGTGATCCATGATACCATAACTGTTGATCCAGATATAGAAGAATGTAGTGAAACAACACCTAGTGCAAGACATCAAGACGATGATTCATGCAAAAATATCGAAGACGCTAATGAACAATCCCTATTACAAAATTGCACTTATTCGTTAGAAGAAAACCTTACttatatttatcgatataaaCACAGTTTGTCCGCTCCCGCATCTCCggttttaccaaaaaaatcaCACAGAACATACTCTGTACACTCTGATTTTGGctcttttgaaaatcttaatatGTACCCAGGTGGTTTCGATGCAAGTAACTTACaagatgacgatgatgaggatgaagaggagaaaaatgatATGGAAGATAACTTTGATGAGGAAGACATGGATATCGAAGAGATTCCAAGCCCTCATACTCCTTTTATAAAACACGACATTACAGATTGCACCAGGTCGCATACACCTCTTTCTACGATCAGTGGGATATCTGTTCTAAGAGTTCGAACTGACCTTAGTAAACCTTCTTCACCAGCATCTACGCATTCATTTTATCACTTGGATGCAGATAGCTTGAGCAATGACCCAGACAGCAACGATGATACTGAATTGTCACCTGAAAAAGATCCAGTCGATTGCAGCCAGGTCTTACAGGATTCTAAGAGTATTCATCAGGAAGTGATTGTTTCTGATAGTTTAGAAAAGAAATCCGACTCGAATCATACGTATCATCAATCAGTAATTACGGAGCATGTTAGCTCCTTTCCCGTTATTCACTCACAGCAGCCGATAATCATTCATGAAACTTATTCAATGTCCAACAATAAAACAACGAACAATCTTTTAAACCTTTCGGAACCGACTAATCCGACGACTAGTACAGATTCCAAAAGTTATCAGCCTAGCAAATCGATTCTTCAAAAACCGACGGAACTCCTAAACATCAATGAGGATGCACATGCTGGACCGATGAACGTCTTTGAATTCGACGGTCTTCAGATTCTAGTTCCTAGTACATTTATAAGTGAATCGTCACAGAAAGCTGTGAGTGCTACTAGCCAGCAATCTATGGCAAGTAGCGAGGGAGGTGCTGGGATTGATGAAGAGGTTAAAAGCGTGAACATGCGTGCTGATGAGACTATGCCACCACGAGGTGAATTATCTGAGCAGGAGAGTAATGGATGTACAGAACACTCTGCATGGCAGTTGTACATGGGTCAGGAGTCCTCGAGGATGTCTACATCGTATGATCTCATGGCTCGAGAAAGTTGGGAGGAATCCGAAGGATCAGATAATGAAATTAGTGGACCCTTACTAGATAGTCGTTCACTAGCTACACATTTCACCTCCAGCCTCTTTTTGGACCGGGATAGGAAAACACCTACAAAGAGGACGTTCAAGTGTCCTCACTGTAATGAAGTGTTCGACTGTCCTAAGGAGCGTAGAGTTCATACTACAACGGTGCACAAGGAACCAGGTCCAAGCAGCAGTAGAGATAATACGGAACAATCTGAAGTGaaggatataaaattgttggaTGGTCGTATGAATATGTTTGACGCATTCGTGCCAGGATTACATGTGCAGCAATCGTATCATCAGCAGCCTCTTCTACATCAATTACAACCTCCACAACAGCAGGATATTTCTAGGGTGGAATCTGATCAGAAGATTGATAATCTGACAATCCCTCCTGCAATAGATGTGTGTTGCTCCATATGCAATCAACAATTTAGCAGCGAGAAGTCTTTGCAGATACATCACAGAAGGATGCACGTGACTGAAGTGACGAAGCGCCGTGAAAACGCAAAGTGTCAAATCTGTAACGAGGAATTTCCGTCAGTGGTGTTGTTTAACTCTCACTTAAAAATCCATCCGCTAGAGTGCAGTCAATGCGGGAAATACTTCTAtaggaaacaaaatttcaagctCCACATGAAACGGCACCTAGGTATCAAGCCGTTCCCTTGCACCGTTTGCGATAAAGCATTCCTTACCAAGCAGAAGCTTGACGAGCATACTAATGGACACACTGGCAATGCTCCTGTGAAGTGTAATTTATGCAACGAGACATTTCGTAGATATTCCAATTTAACCCAGCACAAAAATAGACATCATCTTAATATTAAGAAGAAGTTGAAGGACTACATATGCCATTGCGGCGAGGTGTTTCACACGAAGAAAAAGTTGGCTTGGCATAAAGAGACTCATGACGAGAAACCTAAAGCTTGTACCTACTGTAACGAAAGGTTCATTCACATGGCGAGCTTGACACGTCACATGCGTCGTGCCCATAATCGAAGATTTGTTCCTGATGCTCaaagagaaagtgaaaatgtAGAATGCCCGATttgtaaatgtatttatttacgttcCTCCTTGGCCGTGCACATGCGTGTTCATAATGGTGAGAGGCCCTACGAATGTCAAGTTTGTTCCAAGGCCTTCAGTACCAAGTGGAATTTGCAATTGCACAAATGGACTCACGCGGCAAGGAGCACAAAACCATTCAAGTGCAATCAGTGCAGCGCTGCTTTTTATCGACATAGCGATTATACGGCTCATATGAACTCTCATAGAAACGTTCGTCCTTATACGTGTAATTATTGCGGGGCGCAATTTATACGCAAATATAATTGCTTGCGACATGTTAAGGAACACGAGGAGAACAAGGCGTACACTTGTGACGTATGCAACAAAACTTTCCACCGCTCGTACTACCTTAAGGAACATTTACGTGTACACTCCGGTGCACGACCGTATTCATGTCACATTTGTGGAAAATCAAGTAGCACCAAGTCCAATCATAATAAGCACGTTAGGATTCATCACGCGCGAGAACCtgtaaatacagaaaattaa
Protein Sequence
MDLGGAGTGGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASATVPPLTQPTSPTITPPQTNPQVPTTGTHIPSQSPYPIGPVFECPPMGAMVPPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQQIPTVQMISPITTIPTTTRIRPAVSVAGETNGRTVTVPMNNSESKHILPEIVPEPEAERVIPDIDVPETSSEEQTQDRHETIEGNRIHMEHRGQQTQNSTSQEQHSNQHEYQSVTQSLTIACEHNTSEEEKSQSALPNVDEGDNSDVVPVEMQCKTIEYEESETQQYSQGYEKNVTKDNENDVTLVEVNIQIEEEKLDSRQVLEKDEQNVNESTQAEAALDEEMKESSQPEVEQLERLLITIMESEFSTVQMKEHNEQREQKNSEERAIIERENTVIHDTITVDPDIEECSETTPSARHQDDDSCKNIEDANEQSLLQNCTYSLEENLTYIYRYKHSLSAPASPVLPKKSHRTYSVHSDFGSFENLNMYPGGFDASNLQDDDDEDEEEKNDMEDNFDEEDMDIEEIPSPHTPFIKHDITDCTRSHTPLSTISGISVLRVRTDLSKPSSPASTHSFYHLDADSLSNDPDSNDDTELSPEKDPVDCSQVLQDSKSIHQEVIVSDSLEKKSDSNHTYHQSVITEHVSSFPVIHSQQPIIIHETYSMSNNKTTNNLLNLSEPTNPTTSTDSKSYQPSKSILQKPTELLNINEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEHSAWQLYMGQESSRMSTSYDLMARESWEESEGSDNEISGPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCPHCNEVFDCPKERRVHTTTVHKEPGPSSSRDNTEQSEVKDIKLLDGRMNMFDAFVPGLHVQQSYHQQPLLHQLQPPQQQDISRVESDQKIDNLTIPPAIDVCCSICNQQFSSEKSLQIHHRRMHVTEVTKRRENAKCQICNEEFPSVVLFNSHLKIHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYSCHICGKSSSTKSNHNKHVRIHHAREPVNTEN