Spar006268.1
Basic Information
- Insect
- Syrista parreyssii
- Gene Symbol
- -
- Assembly
- GCA_030142615.1
- Location
- JARQTG010000190.1:70855-78839[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 8e-06 0.00052 20.3 1.0 1 23 190 212 190 212 0.98 2 31 0.0035 0.22 12.0 1.9 1 23 235 258 235 258 0.96 3 31 0.00029 0.019 15.4 1.0 2 23 265 287 264 287 0.96 4 31 0.00038 0.025 15.0 0.5 1 21 307 327 307 328 0.95 5 31 0.0032 0.2 12.1 0.2 2 23 425 446 424 446 0.95 6 31 0.0084 0.54 10.8 0.3 1 23 452 475 452 475 0.92 7 31 0.00015 0.0098 16.3 0.1 1 23 548 571 548 571 0.96 8 31 0.013 0.83 10.2 0.7 1 23 577 600 577 600 0.96 9 31 0.15 10 6.8 1.5 1 23 613 635 613 635 0.97 10 31 3.2e-05 0.0021 18.4 0.6 3 23 680 701 678 701 0.96 11 31 0.01 0.67 10.5 0.8 2 23 764 787 763 787 0.94 12 31 4 2.6e+02 2.3 0.0 2 23 796 818 796 818 0.84 13 31 0.053 3.4 8.3 0.0 2 23 825 847 824 847 0.95 14 31 1.7e-05 0.0011 19.3 1.2 1 23 855 877 855 877 0.98 15 31 0.042 2.7 8.6 1.6 2 23 908 931 907 931 0.93 16 31 0.00027 0.017 15.5 3.3 1 23 934 957 934 957 0.97 17 31 0.038 2.5 8.7 0.5 2 23 964 986 963 986 0.95 18 31 0.0041 0.27 11.7 5.1 1 21 1013 1033 1013 1034 0.95 19 31 0.0035 0.22 12.0 1.8 2 23 1048 1069 1047 1070 0.93 20 31 0.27 17 6.0 0.9 1 23 1073 1096 1073 1096 0.94 21 31 0.021 1.4 9.5 1.4 2 23 1103 1126 1102 1126 0.91 22 31 1.2 80 3.9 0.2 2 23 1134 1156 1134 1156 0.95 23 31 4 2.6e+02 2.3 0.0 2 23 1163 1185 1162 1185 0.87 24 31 0.29 19 5.9 2.7 2 23 1194 1216 1194 1216 0.96 25 31 3.9 2.5e+02 2.4 2.0 2 23 1222 1244 1222 1244 0.92 26 31 3.4 2.2e+02 2.6 0.0 3 23 1307 1328 1305 1328 0.93 27 31 0.00047 0.03 14.7 1.0 1 21 1354 1374 1354 1375 0.95 28 31 0.63 41 4.9 1.3 2 23 1474 1496 1473 1496 0.93 29 31 0.79 51 4.6 0.4 2 23 1503 1525 1502 1525 0.94 30 31 0.89 58 4.4 2.5 1 23 1536 1558 1536 1558 0.97 31 31 0.041 2.7 8.6 0.2 3 20 1567 1584 1567 1586 0.95
Sequence Information
- Coding Sequence
- ATGACAGGAAACACGAAGGAGGAGGAAAGAGATCAAAAGataGCAGAGGATGATCGTTTGCCAAAGTGTTTATGCTACCGGTGCATGTACAACctggaaaatttttatgacttcAGAACTGCATGTGTCAATGCGGTGGCATTGTTGGAAAGATGTTTACCCTCCAGTGATGCGAGCAACAATGGAGCGCAGACTCATATGGATCAGTATACAGAGCTGCGCTCTGAACTTCtcaaggagaaagaaaatatgccTATACTCATTCCTGAAGCCCCCATAGTCAATCCCAATGCAGCGCTGGGCACTCCACCAAGACTGAATTCTGATGGTGAAGCGGATCATGAGATTGAAGAGATACTTGATCAGAGTGGCACCGATGAAGgtcATGACGACCACGAGGATCCTAAATCGGATGAATATGAAATGGATATGGAAACAAATCCAAGTGATTTCCTGGAGATGACGTCCATGGTCACTGACGACATCGAGGAGATACGATCTCTCTCCATGCCACTTGAGAAACAAGACACCAGTGTTTTTCAGCACACGTCGGAGCAGCACGAGGTCTACGTGTGCTCTTTGTGCAACAAGGCCTTCAGCTCGAAAGGGCATCTCTCCTTGCACGCCAGAATTCACGTGGGTGCTGGTGATGTAATCGGCGAGAAAGTCATCACCGACGATCACACATCCTACAAAAGACCTTATCAGTGCGACCTCTGCAATAAGTCGTACTCGACGGCAAAGCACAGATGGGGACACGTCTCGACGACACATAGGGGTCATCCAGCAGTTACGTGTAGATACTGTTCTCGGATCTACTCGACGAGAACGAACCTGGAGGAACACATAAAGTCTCGTCACGCGGGCTTACCACCTCCTCCGGAATTGCCACTTCCTTATATTCAACCTGACAACAGGTTCCAGTGTAAGACGTGCCCGAAGATGTACACTAACGTCACCGACCTAAATAAGCACAGTCGTGTCTGCCTTGGTGAGAGACGTAGGGAACTGCCCAACAAGATTTCCGTTCAGAAGAGTAAAAGTCTTATAGACACGTCGGATCTATCTAGTATGGACTCTGATGACGAGAGTAAGGACTATCGGGATGCCGAAGCGAAACTCGCCAAGAATCCCCAGCTGACTATACTTAAGCAGGCGCTGACCAAGGGCGACAGCCTTAAGCGGGATTACGAGGACAAAAATAGAATTGGCTCGAAACCTAAGAAAGTCGCGAGGACAGacAGTAGTGAAACCGATGTCCAGAAGAGGTGGTACTGTGAAACCTGCCCACAGAATTTTACGTCTGTGGAGAATCTGAAGGAACACGAAGTGACCCATGAGGCGGACAAACCCTACATTTGCATCCTCTGTGAGAAGGATTTCGTTCTGAAGTCGTCTCTCAGTAGACATATTTTGACCTCTCACGGGGTCGATCCTTGTCCAATCGTTGACAGTGATAAGTGTCTTAAGAAAACAGTGGCTAATCTCCAAATGCGGAATAAGCAGGCGCAGATCATCTGCAACGAGTCCAAATTAACCAAAGAGGCATCCCATTCTCCATTCTCGCCAGAGATGACTATGGATAACGACGAGGAGGATCGTGAGAGCGGCCACGAGAATATGATTGAAATAGAGACTGTGTTTGTCTGTGAAATATGCACAAGGGATTTTAACGATCGTGCATCACTGTGGTTACACATTAGAGCGACGCATAAAGAATTTGCGGCGTTTGCTTGTGGAGTCTGCTTAAAGATTTGCTCGGACAATACTCAACTCTTGAATCACGTTAATATGTACCACGGTGGCTCAAAGCTTCAGGTCTCAGAACAGAGAAGatatagctgTACAATCTGTGGCAGGCAACACGATTCCAGGAAGAAGCTTATCACTCACGTGTCTATTCATAATGTCGATCCTGGTTATGATCCAGCGAGTTTTGTTCAACTGaacagtaattattataatgagaATCTGAATAGTAACGAAGCTAATGAGCAGCCTATTGATTTTGATGGTGAAGATGGAGAGAAGATCGACTGCTATATATGTTACAAGTCCTTTCCTAACGAAGATCATCTCATTAGGCATCAGCGTAACGCTCATAAGtcTGAACCCCTGGTACAGATGGGTGACCCTAGCAATGGTAATGGATCCGGTTCTACTCCAGGCAATGGAAATCGTGCTCAGTATCATTTGTTCTTCGTTTGTGAACTTTGTGGTAGTTCGCATCCAAGTAAATGGGAACGCTGGCTGCACGTCAGTGGAGTGCACAGTAATGAATCTGCCATAAGATGCGAGCGCGATGACTGCGGTAAAATATTTGCTACCAGGTCACTTCGCAACGAGCACGTGCAACATCATCTTCTTCAGGGTGCTTCGCCGAATACCTGCGAGATCTGTGGGAAGCTGTGGGGCAGTCGTGTGGATTACTGGAAGCATGTAATGGGCGTGCACTCTGACACGGTACCCTTAATTTGCGGCGTATGTCTAAAGGTCTTCCCCGACGTCATCCAACTTAGTGCTCATGTCAAGTCGAATCATTGGCCTTTGACCAACGGAGACTTTAGCTGTGACATCTGCGGGAGGCCGTACTCCAATAAATCAAAAATGTCCAGACACAGGAAGATACATGGTTTAGATGTGGATAGCTACGCCAACAGCACCCTGCACGAGGCTATGAATGATTCTAGGCTGGAGCAGGGTTCCCATGAAAGCGACCTTACCTGCGAGATGTGCTCCGACCTCAAATTCACTAACCTGGATGATCTGTGCAATCACAGAAGAACAGCGCACGGACTATTCCCTTGTGATCTTTGTAATAAGTGCTACGGACGGACTTCACACCTTTGGAAACACGTCAATCGCGTTCATAAGGGTCACGAGGACGTCACCTGCAGGTACTGCATGAAAACCAGTGCCTCGAGAGATCATCTCGCTGCTCACATAGCCAAGATACACAGGTACGAGCCGGAGATGAAGAAAGAGATACGGGAGTCGTCCATCTTCAAGTCGCCCAATCCTGAGGACGAGACTCTTCATCATTGTGAAAAGTGTAACAAAGGTTTCCACAAGAGGTATCTTCTACGTCGTCACATGAAAGGCTGTCAGAATTACAGAAAGGATCCTGGTGCATTGCTCACCAGGTGTCGTGCCTGCGAAAGGATATTCAAGGACCGTGCTAGTCTTCAGAAACATATTGAGAATCATCACAGTACCTATACGTGCCATCTCTGCGATGAGACCATAACCTCCAAATTAGGAATTATGACGCATAACAGAGTAAACCACATGAACCATCCCGATCTGACTTGTGATTATACCAGTTGCAAGAAATTGTTCCGTACCAAGGAGGACCTGGAGTCTCATCGCAAAGATCACAAGTACCTTGGTACTCCTAACGTCTGTGACTTTTGCGGTGATACCGTTGAGAATAAGCTTAAGCTCAAGATGCATATATTGTCCTTACACCGTAATGAAATTGGAGTATCCTGTGGTGTTTGCCTTATACCCATGAAGGATCCTAAGGAACTCAAGAGACACGTGGAGGACGTCCACAGGAGTATACTGTCTAAGCCCAATACCTGTCAAGTGTGCGGCAAGCAGTACGCCTCCAAGTGGAAGGCTTTTGATCATACGAAAAAGTGCCACGGCAAGGTGTTCAGGACTTGTAAACAGTGTCTCGCAGTGTTCACTAGTGACGAAGATATAAAGCATCACTACGAACATGTTCATAACGTCCCCAAGGATCAACTTGCTGGTTTTGAGTTCAGGCTGGACGTCGGTCCCAAGCAGGAGGAGTTTGACGCACCTGGAATCGTTGTTAAGGAAGAGCCTGAAGATATTGATTTCTACGAGGCACCTTGCGAGGAAGATTACCACAACTCTAAGAGAAAGAGGTCGTTGTCTGATACTCTAGACTGTGAGATGTGTCCTGAGATCTTCCTGAACGACGTCACCCTGGCTGAGCACTATAGAAACGTTCACAATACAGATCCTATGCGTATATTCAAGAAGCTCAAGCTAGACACTGCAAAGCGGAAGACGAAAAATCGCGAGAACTTTGAATGTAAGAACTGCAGGAAGCAGTTCTCTACGAAGACCCTCTTCTGGAATCATATAAACGTCTGCTCCAGGCGTAATTCTGTCAGTAGGGACGACAGGGTATACCCCACGTCTATCTTAGAGTCTCACCTCAAAAATAACAATCAGATTAAAAAAGAGGAACCTGAACCCATCCTCAACGAGTCCAATCTGAACATCCCGGATTTCAATCTCTTTGAGGATATTAATATGCAGCTCTCTGGACAAAAACCTGTACCTAACCTCATGCCTCTGTCTCATATGAAATCGCTGTCAAGTATGAAATGCTCGAGAAAGGATTCCAGGAAGGTGTACGACGAATCGACGAATACCGAATGTGCCTGTGAAGTCTGTGGAAAACAGTGGCCTGCTAAGAAGCATCTCTGGCAGCATCTTATAAGATTTCACAGAACGGAAGCTGCTGTCACCTGTGGCGTTTGTCTGAAGCTCTGTAAAACTTATCAGGACCTGGCGGACCATCTAAAAGCAGCCCACGAAGCCATTCTTACCTGCGAGGGTAACAATTTCACTTGTAAAACTTGTGGCAGATATCATAATGCTAGAAGTAAATTACTCTTGCATATGAGCATACATATTAATTGTAATGGTAGCAGCTGGTGTAGAAAATGTCAACAGAGCTTCGAGAGTGAAGATAAACTCAAGGAACACATCGCCATCTGTACTGGTGGTAACCAGGTAGAGTACGAGGAACATAGTAATGATCTGGAGAATACTGCCAAGAACAATGAGAATGATCACGGTTATAAGAATATTCTTATGGAGGACAGGAATTCCTTAATGGAGGAAGTGGACGAGGTCGAGGAAGTTGAGTTTGAGACTGAAGCTTCTGATAATCGTGAGGATAGTAATTCCGACGATAGTGATGATTCCGATAGTGATAGTAATCCTAGCAGTAGTGATGATGAGGATAACgataatgagaatgagaatgggAATGAGGACGAGGCTGAGTGTAGGACTAACAGCAGAGCTACTGAGGTTAGCAGTGACAGTGAGAGTGCAGATCAAGATTCGGACGAGGATGACGTTAACGTAGCTGAGGATTATCACCCGGAGCAGAGTGAAGACATCAAGTGTAATAACATTGTCAAGACAGAACCTGAGGACGAGGAGGAATCGCAGTATCATCAGGATAAGGAAGAGTCTCCTGCATTGAAGGTAGACGAATATCCTATGGAGGAAAGGAAGGATCATGAGAATCACGAGATTGTCAAGGTCGAGGTCGACGCTCCGGATTACTCTGATGATGATGTAGAAGAGGACGATGACGATGGACCCCCAGTACTAAGTCCAATGATGCCATTACCACCGGTTCAGGATGCAGAACACGACAGCAGACACTCGGACGATGAGGTACAGCATGAATTAACGCCTATGGTGTCTATCGAAAAGTCAAATGAGACTGAAGGGGTCGACGATGATGATCACCAGGAGTTAAAGGACCAAATGGAAAATGGTAAGTCGGCCTCCAGTTCGTCAGAGTATTATGAGAAATTCGATTCGCAGAAGGTGAGCTCGAATGTGCCTTCACTAGTAGCGGGAGAATCTCAGTCAGATACAGAAGAGGAGGGCGAGGCTGAGGATGACGAGGAGGAATATGATAGCCAAATGGAAGCTGTGGATCAGAACGACGACGAGAATAAAACGTTCATCAGTTACGACACGCATAACAACGAAGATTCCGTCGAGGGTAGCTTCGCTGAGAATTCCGAAGACGAGACAATGGAGGTCGAGGTTGCCGATGGAGATGGTAGCGTCCAGATACACGACCTCGACGGTACTGTACTGATGGTAGCAAATGATTCAGATGGTAATCAGATTCTGATCCAAAGGAACGTAGCTGATGTGATGGAGAATGACGATTCTAATCCCGAAGTTACTGAGTACGTCTATCAAGAAGGGCAGGAGTATGAACTAGAGGAAGGTTATGAGGAGTCGCAGCAAGCAGATGACGTGCAGGACGTCTCTGACGAGCTTCAGGAAGAGGATGATGAGATCGGTAACGAGGAGTTCGACGATGGAGTCGCTACGAGAGAAAATGAAGCTGAGGAAGGCGAAGACATGGAACCTGAacaagaggaggaggaggaggaggaagacgaGCAGGAGCAAGAGCAAGAGCAGGAACAGGAACACGAAGCCGAAGACTGTGAAGAGGAGGTCGttgacgaggacgaggattcCCAGAAACCGATAAACAGTGCCAAAACCGTAGTGTCAAGGACGTAA
- Protein Sequence
- MTGNTKEEERDQKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPSSDASNNGAQTHMDQYTELRSELLKEKENMPILIPEAPIVNPNAALGTPPRLNSDGEADHEIEEILDQSGTDEGHDDHEDPKSDEYEMDMETNPSDFLEMTSMVTDDIEEIRSLSMPLEKQDTSVFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCRYCSRIYSTRTNLEEHIKSRHAGLPPPPELPLPYIQPDNRFQCKTCPKMYTNVTDLNKHSRVCLGERRRELPNKISVQKSKSLIDTSDLSSMDSDDESKDYRDAEAKLAKNPQLTILKQALTKGDSLKRDYEDKNRIGSKPKKVARTDSSETDVQKRWYCETCPQNFTSVENLKEHEVTHEADKPYICILCEKDFVLKSSLSRHILTSHGVDPCPIVDSDKCLKKTVANLQMRNKQAQIICNESKLTKEASHSPFSPEMTMDNDEEDRESGHENMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNTQLLNHVNMYHGGSKLQVSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPGYDPASFVQLNSNYYNENLNSNEANEQPIDFDGEDGEKIDCYICYKSFPNEDHLIRHQRNAHKSEPLVQMGDPSNGNGSGSTPGNGNRAQYHLFFVCELCGSSHPSKWERWLHVSGVHSNESAIRCERDDCGKIFATRSLRNEHVQHHLLQGASPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVIQLSAHVKSNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDVDSYANSTLHEAMNDSRLEQGSHESDLTCEMCSDLKFTNLDDLCNHRRTAHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRYCMKTSASRDHLAAHIAKIHRYEPEMKKEIRESSIFKSPNPEDETLHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCDETITSKLGIMTHNRVNHMNHPDLTCDYTSCKKLFRTKEDLESHRKDHKYLGTPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKELKRHVEDVHRSILSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEDIKHHYEHVHNVPKDQLAGFEFRLDVGPKQEEFDAPGIVVKEEPEDIDFYEAPCEEDYHNSKRKRSLSDTLDCEMCPEIFLNDVTLAEHYRNVHNTDPMRIFKKLKLDTAKRKTKNRENFECKNCRKQFSTKTLFWNHINVCSRRNSVSRDDRVYPTSILESHLKNNNQIKKEEPEPILNESNLNIPDFNLFEDINMQLSGQKPVPNLMPLSHMKSLSSMKCSRKDSRKVYDESTNTECACEVCGKQWPAKKHLWQHLIRFHRTEAAVTCGVCLKLCKTYQDLADHLKAAHEAILTCEGNNFTCKTCGRYHNARSKLLLHMSIHINCNGSSWCRKCQQSFESEDKLKEHIAICTGGNQVEYEEHSNDLENTAKNNENDHGYKNILMEDRNSLMEEVDEVEEVEFETEASDNREDSNSDDSDDSDSDSNPSSSDDEDNDNENENGNEDEAECRTNSRATEVSSDSESADQDSDEDDVNVAEDYHPEQSEDIKCNNIVKTEPEDEEESQYHQDKEESPALKVDEYPMEERKDHENHEIVKVEVDAPDYSDDDVEEDDDDGPPVLSPMMPLPPVQDAEHDSRHSDDEVQHELTPMVSIEKSNETEGVDDDDHQELKDQMENGKSASSSSEYYEKFDSQKVSSNVPSLVAGESQSDTEEEGEAEDDEEEYDSQMEAVDQNDDENKTFISYDTHNNEDSVEGSFAENSEDETMEVEVADGDGSVQIHDLDGTVLMVANDSDGNQILIQRNVADVMENDDSNPEVTEYVYQEGQEYELEEGYEESQQADDVQDVSDELQEEDDEIGNEEFDDGVATRENEAEEGEDMEPEQEEEEEEEDEQEQEQEQEQEHEAEDCEEEVVDEDEDSQKPINSAKTVVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00297739;
- 80% Identity
- -