Basic Information

Insect: Syrista parreyssii
Gene Symbol: lov
Assembly: GCA_030142615.1
Location: JARQTG010000280.1:1214732-1217163[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.1e-18 3e-15 55.6 0.0 1 44 505 548 505 549 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.1e-18	3e-15	55.6	0.0	1	44	505	548	505	549	0.96

Sequence Information

Coding Sequence: ATGTCGAGCGCCGCGGAGAGTCCTGACGGGATGGCTCTGCAGTCCCATTATTCCCTTAGATGGAACAACCACCAGGCCCATATTCTCCAGGCATTTGAGGCCCTTCTTCACGCCGAGACCCTCGTCGACGTGACCCTCGTGTGCGCCGAGACCAGCATCAGAGCTCATAAGGTCGTTCTGAGCGCGTGCAGTCCCTTCTTCGAGAGGATATTCGCGGAGCATCCCTGCAAGCATCCGGTGATCGTGTTGAAGGACTTTCCCGGCCGGGAGGTGACAGCACTGATAGACTTCATGTATCGTGGCGAAGTACGAGTAGGACGTGAAGAATTGCCAGGACTGATGCGAGCAGCTGAGAGTCTTCAGGTGCGAGGTTTGGCATCGTCGGAACCGAGGCCAGCGAGTCCACCGGAAACACCAACGGCGGATCTTCTACTGGGAGAGCCGTCGACGCCGGAAGGCGCACGTCAAGGTACGCCAGAGGACGACGACGCGTCGGAAAGCGCGACTGTGCCACCTCCGGAACCTGGAGGCTTTTCCAGGGAACATCAACTAGCACGTGACAGATTACCGCACATGGGCCAACTTAATTTCTCAGTGCGGGAACTGCGGGAGTCCTGCGGTTCGCCATTAATGCCCCGAAGAAAGCAAGCGAGACCACGACGAAGATCCGGAGAGTTGGTACCTCAGGATTTGAGTAGACATCATCCCGCTCCGAGTCCAAGTCCTCCGAGTGGCggtagtagtggtggtggtggtggcggcggcggcggcggcggcggcggcggcggtggaCTGAACCTCACGAATCAACAGAGGGACCAGCCTGGCCAGCAGGAGGACATGGCGGAGAATCTGTCGATGAAACGGTCGCTCTCTCCCTTACCGACGGAGCATAATATCAAGACGGAGAGCGAGAGTGCTAGTAGTCCTCGAGGATCGCCTCTGACAGGGACGAGTCTACAACCCGACGGTTCCCTCCAGGAGTTACCGGCAGCAGGGTTCCCGGGAGTCTCGGCCCTCTCCTTAACCCCACCTCATCACCACAGTGAGTACCTGACCAGTCTGGGACAACTGGCAGCTCAGTGGCTCCCGAATCACCCGCAGGGTCAACTGCCTCAAGGTCATCACCCACGGGAAGGGAGTCCGCACAATAGGTCCCATCCTTaccaacagcagcaacaagaCTCGCCTCTTACCCCAAGACGGTCAGTTGCAGTTTTTCCCATGGACGGGGTTGGCCATTTGGCCGGTGCCGGTAGTTTATTCCCACCAGGAAGCACACTCGACCGAAGTAGCTCCCTTTTGGCGGATCTCCATGATAGTTTCAAACCAGAGAGCCTTCATGGCCTCTTTGGCACTGGTCTCGGACATCATCCCAGCAAAAAGGCAAAGAAGCATAGAGCCGAGAGTGCAGATGGTCCCCGAAGATGGTCCGAGCACAGTCGTGGGTTACCCGTGGGTCGACCTAAAGGTCAACACAGTGCACCTCGAGGAGGACCACCCAGGTCATGGACCAACGCTGAACTCACCGAAGCACTTCAGCACGTTTGGAACAAGAAAATGACGACCTCACAAGCCAGCCGTATCTTTGGCATCCCCTACAACAGTTTGCTGATGTACGTGCGCGGCAAGTACGGCAAGAGTCTCAAGCTGGAGCAGTTACGCAGGGACTGCACAGGTGCCACCACCGGCGAGGTAGTGATGAATTCTTTGAACAACAACGTCAAGGCCGTCCAACCGCCCACGCAGATGTCACACCATCTGGCGGGTATTCCGCATCCTGGTGACGACGCGGGATTCACACATCCCCTTCTGGGTGGTAATTTACCCCAGGGTTTCTTCCCAGACTTTAGTGCTGCCTTTCCGGTACCCGTTAGCATGGTGCATCTGCTGCCACCTAGCGAGCAAAAAGCCTTCGAACCACCACCAACATCAGGACCCGTATCCAGCGAACTCACGCCAAGGAGTAGGACGCCTTCACCATCGGCCGCGCACGATCCACCACCTCAGCCACCCACGCAATCGGCCCCAGCGCTATTACAGCAAAATGGAAACGACTAG
Protein Sequence: MSSAAESPDGMALQSHYSLRWNNHQAHILQAFEALLHAETLVDVTLVCAETSIRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFPGREVTALIDFMYRGEVRVGREELPGLMRAAESLQVRGLASSEPRPASPPETPTADLLLGEPSTPEGARQGTPEDDDASESATVPPPEPGGFSREHQLARDRLPHMGQLNFSVRELRESCGSPLMPRRKQARPRRRSGELVPQDLSRHHPAPSPSPPSGGSSGGGGGGGGGGGGGGGGLNLTNQQRDQPGQQEDMAENLSMKRSLSPLPTEHNIKTESESASSPRGSPLTGTSLQPDGSLQELPAAGFPGVSALSLTPPHHHSEYLTSLGQLAAQWLPNHPQGQLPQGHHPREGSPHNRSHPYQQQQQDSPLTPRRSVAVFPMDGVGHLAGAGSLFPPGSTLDRSSSLLADLHDSFKPESLHGLFGTGLGHHPSKKAKKHRAESADGPRRWSEHSRGLPVGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATTGEVVMNSLNNNVKAVQPPTQMSHHLAGIPHPGDDAGFTHPLLGGNLPQGFFPDFSAAFPVPVSMVHLLPPSEQKAFEPPPTSGPVSSELTPRSRTPSPSAAHDPPPQPPTQSAPALLQQNGND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01474063;
90% Identity: iTF_00296927;
80% Identity: iTF_01395234;