Basic Information

Insect: Synergus umbraculus
Gene Symbol: -
Assembly: GCA_900474325.1
Location: UCOK01019357.1:10502-20493[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.21 24 6.2 3.1 1 23 465 487 465 487 0.97

2 18 6.2e-05 0.0072 17.3 0.4 2 23 523 544 522 544 0.95

3 18 0.00081 0.093 13.8 4.9 1 23 550 572 550 572 0.98

4 18 0.0017 0.2 12.7 0.1 3 23 580 601 578 601 0.90

5 18 0.18 21 6.3 3.3 1 23 608 631 608 631 0.98

6 18 0.0012 0.13 13.3 3.3 1 23 635 657 635 657 0.96

7 18 0.00095 0.11 13.6 0.3 1 23 663 685 663 685 0.98

8 18 8.6e-05 0.0099 16.8 2.3 1 23 691 713 691 713 0.97

9 18 0.001 0.12 13.5 0.1 1 17 718 734 718 735 0.90

10 18 3.3 3.8e+02 2.4 1.5 2 20 1040 1058 1039 1061 0.84

11 18 3.5e-05 0.004 18.0 1.6 1 23 1096 1118 1096 1118 0.98

12 18 0.36 41 5.4 5.5 1 23 1124 1146 1124 1146 0.98

13 18 0.00014 0.016 16.2 0.5 2 23 1153 1174 1152 1174 0.95

14 18 0.00055 0.063 14.3 1.4 1 23 1180 1203 1180 1203 0.97

15 18 3.3e-06 0.00038 21.3 2.7 1 23 1207 1229 1207 1229 0.97

16 18 0.012 1.4 10.1 2.3 1 23 1234 1256 1234 1256 0.98

17 18 1.8e-07 2.1e-05 25.2 1.3 1 23 1262 1284 1262 1284 0.98

18 18 4.5e-05 0.0051 17.7 1.6 1 21 1289 1309 1289 1310 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.21	24	6.2	3.1	1	23	465	487	465	487	0.97
2	18	6.2e-05	0.0072	17.3	0.4	2	23	523	544	522	544	0.95
3	18	0.00081	0.093	13.8	4.9	1	23	550	572	550	572	0.98
4	18	0.0017	0.2	12.7	0.1	3	23	580	601	578	601	0.90
5	18	0.18	21	6.3	3.3	1	23	608	631	608	631	0.98
6	18	0.0012	0.13	13.3	3.3	1	23	635	657	635	657	0.96
7	18	0.00095	0.11	13.6	0.3	1	23	663	685	663	685	0.98
8	18	8.6e-05	0.0099	16.8	2.3	1	23	691	713	691	713	0.97
9	18	0.001	0.12	13.5	0.1	1	17	718	734	718	735	0.90
10	18	3.3	3.8e+02	2.4	1.5	2	20	1040	1058	1039	1061	0.84
11	18	3.5e-05	0.004	18.0	1.6	1	23	1096	1118	1096	1118	0.98
12	18	0.36	41	5.4	5.5	1	23	1124	1146	1124	1146	0.98
13	18	0.00014	0.016	16.2	0.5	2	23	1153	1174	1152	1174	0.95
14	18	0.00055	0.063	14.3	1.4	1	23	1180	1203	1180	1203	0.97
15	18	3.3e-06	0.00038	21.3	2.7	1	23	1207	1229	1207	1229	0.97
16	18	0.012	1.4	10.1	2.3	1	23	1234	1256	1234	1256	0.98
17	18	1.8e-07	2.1e-05	25.2	1.3	1	23	1262	1284	1262	1284	0.98
18	18	4.5e-05	0.0051	17.7	1.6	1	21	1289	1309	1289	1310	0.95

Sequence Information

Coding Sequence: ATGGAGGTCAAGGAGGAGGAGGCGAAAATTTGCAGACTCTGCGGACAAACGGAGAATATCTGCATCGACGTTTTTAGCGAGGATGGCACAAGTCGACTTCTTCATCTCAAAATccattcgaaaataaatatcctGATAGATGAAAGGGATCCTCTGCCAAAGACGATCTGTGTTCATTGTGTGGGGAAGCTCGAATTTGTTTGTGACTTCCAAGAGGAGTGTCTTCGAACGCAACAACTGTTACGCGATCGGTACAATCTACCACCCCTATCAGATGTTGATGAACTCGAGAAACTCGACCGATCGGTTCCCGGGACCTCGACAAACAACAACAATGACTCGGACAAAGATCTCAACGCCAAAACGTCTCAACTGGACGTGCAGGAAGCCTCCAGCGACCTCAATAAGCCCATCCTCACCACACTTCAAAATGTTCCAGTCTTGACGACTCTACAAAATGTTACCTTCCCTCAGAATTTTTCTAACTCTCAGGAACTTCTCCACAGTCAGGTTTTGGAGGAGGAGAATATCTTACAAACTCAGGATATTTTAAATCGAGACGGTCTGCGAACCGAGGTGGTTTTGGAGAATCGTAACATTCCCCAAGATCACGAGGCTATCAAAATTCACGATGTTTTACAAACTCACACCGTCCTCCACGCTCATGACGCTCTCCACACTCAAGACGTCCTCCAGGATCTCCCGAGATCGCCATCAACTCCGAATATCAGGAGTATCGAGAGACTCGTGAACCAGAGCAATCCGGACAGTCCCACACCTCAGGAAAACTGCTTCCGTTGGTTGAGAAGCAGAAACGAACTAGAGATCAAATGCACCAAGTCCAGAGATGCCAACCTCTCGATTGCGGGGAGACTCCGCAGCCACAACAACAGCGTCTCGGAGTCTCCGAACTCCAAATCGTCGAGTCAGACCTCGGAAAAGACGAACGGTCAACGCAACATGATTCAGATCGCCACGAGCACTTTGAACAAGCTTCTGAACGTGATTTCCGACTCCTCTGAAGTCGAGGTTTCCGTCCGGGAGTCTTTGAACTCCAGCAACAGCTCCGAGGACATCAGCTTCCTGATTGAGCTCCACAAGAAGCAGAACTCGAGTGTGAAAGTCCTCGCGAAGGTTTTCCCCGACCAAGGCTCGTGTCTCGTTGACTCGACGATCGTTGCGCTGTTGAAGGATCAGAGGAACGcagaaatcagtgaaattctgAAGATCATTGTTGAGAAAAGTCAGAGGGGGATTTCGGAGTCGGAGAACATCGAGGATGAGGAGAGCCAAGGCTCCGTCCGGAATCCGGAGGAGCTCTTCAAGATGGACGGAGAGGAGATCCATGTGGATGAGAATGTGGAGCAGGTTTCTGTTAATAATCAAATCAGCTACGCCTGCAGACTCTGCAGGAAGGTTTATGAGCGCAGAGACAAGTGCACGGTTCATGTTAAGACACATTTGGGGATCAAGCAGTACATGTGCATCGTCTGCAATGCTAAGTTTGTCTGCAAGTCGGATGTCATGAAACATATCAGGTGCTCTCATACGAATCCAAGGCCTATTTCCTGTCCCAAGTGTCCTAAGAGGTTCAGGTCCAAGTTCGACTTGGCTGAGCACAACAACGTCCACAAGGGCATCAAACCTTACAGATGCTCCGATTGCGATCAGACTTATCATCACAAAGTTTCGCTCCAGATGCACGTCAAGTCTCATCTTCCGCCGCAGAATCTAGCGTGCGAATATTGCGGCAAGGTCTTCCCTTATCGGACCAGATTGTTGAGCCACGTTGGCAGCGTTCATATGAAAAACAGAAGGAACTTCAGGTGCCACTTCTGCTACAACTTGTACTCGAGTTTGTCCGTTTTGAACGATCACATTAAGACGAGGCATGCGACCACTTTCACTTGCGAGACCTGCAGCAAGACTTTCAAGGTCGCGTCGAAGTACAAGGCGCATGTTCATCAACATACTAATCCGAAGCCTTATGTTTGTAATGTTTGCGATAATAGGTACGCCTCGAAGGCCTTTTTGAATGAGCATTTGCTCAAGCATCAGGGACTGAGGAAGCATGTTTGCCAGAAGTGCGGCGCAAGATTTGCTCAGGCGAGCCATTTGGCGGCGCATAGACACGTTCATGGGGAGAAAACACACGCGTGTCCTGAGTGTGGGAAGAAGTTTAATAGAAGGGATAATATGAAGaTTTCTGAAGACGACGAGCTGCCAACCTGCGTTTGCGTAAAATGCATCGGAGCTTTGGAATTTTTGTGCGATTTCTATAGCTGGTGTCACCGAACCCAACAGAATCTAGAGAAAAagGCAAAGAGGATCCATTCCGAATCCGATGGAAGTCAATTTTCCACAGACGATTCTGACAAGGAAAACGCTTTGCCACCGAAGAAACGAAAGTGGAAAGCTAAAGTCCTAGAACTTGCGAAGAAAGTTTCTGAACCCGTGCAACTTCTGGAACCGGAAATCCCGGAAAAAATTGCTATCAACAAAGAAAGTGTCTCACCTTCTGCTTCGTCCGGAAAAGACGTTGcgatttcttcttcttcttctgaaGTTTTGGTGCCTTCCCAAAACGAAATTTCGATTTCATCCGAAAAAGAAGTTTCGGTTCCTTCTCGAACGGAGACTTCGGATTCTTTCGAAAAACAGCTCTATATTGCCGTCCAAAAGATACCCGCCGTTGTAAAAACCGcttcgattgtcgaaaatgcAGTTCCTCTGACAAAAGAAGCTTCTGTCTCTCTGAAGCCAGAGATTCCGAACAAGGAGAAAGATTCAAAGACTCCGAGGACTCCAGAGCCCAAATCAAATACTGATAAGAATCAGAACGAAGAAACTAGGAGATCTGGTGATAATAAATCAACTACTCCTCTTACTGCCTGGCTCAAGGGAGATTCAATGAGCAAAACACGCAAAGTATCCGATAGTTCAGTTCAAGATAAAGGCAAGATTTCGAGGCTCAGTGATTCCAAGTACGGGAAAATATCTGAACTGATGACTCCTGAGCAAAAGAATACTATCGAGAATTTTTATCGTGTTGATATGTCAGTTGTTGACGTAATTAAAGTCGCCAATAATATGACTATTCATTCCAGAAATGAGATTGAATGCAATATTTGTAAACAGAAGTATAACCGGATGGACAAGTGccaggttCATATTTGGAGACATTTGGACATGACGCCCTACTTTTGCTCCGCGTGCAAATTTTCTACTCTGACAGTGAGCAATATTCGATGCCATATAAGAAaatcacatttaaaaatcaaaccaTTCGAGTGCCACGTCTGCCAAAAGAGATACACATCGTCTACAGCTCTGGACGAACATATCAACACGCATACTGGAGCAAAACCTCATCAGTGCAGTATTTGCAGCTTCTCGTGCTCCAGTAGACAGATTTTAACGAATCACTACCTTACCCACAAAAATCTCAAGGACGTAGTCTGTGATGTTTGCGGAAAATCTTTTTACTCTAAAGCTCGCCTGCGAACCCACAAATTTATTCACATCAAGGATACTGCCTTCAAGTGTAAATACTGCTCGACTTATTTCATGCAAGAAGAAGCTCTAAATAAACATTATGAAACAGCTCACGCGAAGGATCACGAGTGCAACATTTGTAACAAGAGCTACAAGTCCAAGAAGGCCTTAAACAATCACCAAAATgTCCATTCCGAAGCGAAATATCAGTGCACCATCTGCCCTAATAGATATAAGAGCCAACATATCCTCAAAGAGCATCTCTTGAAACACAAAGGCATCAGGAAATATAAATGCACCACGTGTCAAAAGACGTTTGCCCAACAATCTCATTTAGCTGCTCATATGGCTGTCCATATCGGAATTCGatacAAATGTCCCGGCTGTAAAAAGGGTTTCAACCGCCACGACAACATGAAAGTCCACACGAAACGCTGCAACGACTTTATTAACAATcctgatttaaaagatttcttcaCAACGAGGGTaacaaccaaaactgagaacGTCAGAAGCAATGAAACTGCGATGGACAACACAAGTCTTTCGTCAATAAATTCGACGAAAACAAATCTCGCTGCTGACAAACAAATAGTCACAAAGGTTGAACCGGATATTAACTCAGATAATTCCGATGAAGACTTTTTTCTGTACGCAGAAGATGATGATGAGTCTGAAAAATCAGCCGATGAAGAACTAAATACGGGAAGGAAAATTTCCGTGACGGAAAATATCCTCTCGCCCGAGTATTTCtga
Protein Sequence: MEVKEEEAKICRLCGQTENICIDVFSEDGTSRLLHLKIHSKINILIDERDPLPKTICVHCVGKLEFVCDFQEECLRTQQLLRDRYNLPPLSDVDELEKLDRSVPGTSTNNNNDSDKDLNAKTSQLDVQEASSDLNKPILTTLQNVPVLTTLQNVTFPQNFSNSQELLHSQVLEEENILQTQDILNRDGLRTEVVLENRNIPQDHEAIKIHDVLQTHTVLHAHDALHTQDVLQDLPRSPSTPNIRSIERLVNQSNPDSPTPQENCFRWLRSRNELEIKCTKSRDANLSIAGRLRSHNNSVSESPNSKSSSQTSEKTNGQRNMIQIATSTLNKLLNVISDSSEVEVSVRESLNSSNSSEDISFLIELHKKQNSSVKVLAKVFPDQGSCLVDSTIVALLKDQRNAEISEILKIIVEKSQRGISESENIEDEESQGSVRNPEELFKMDGEEIHVDENVEQVSVNNQISYACRLCRKVYERRDKCTVHVKTHLGIKQYMCIVCNAKFVCKSDVMKHIRCSHTNPRPISCPKCPKRFRSKFDLAEHNNVHKGIKPYRCSDCDQTYHHKVSLQMHVKSHLPPQNLACEYCGKVFPYRTRLLSHVGSVHMKNRRNFRCHFCYNLYSSLSVLNDHIKTRHATTFTCETCSKTFKVASKYKAHVHQHTNPKPYVCNVCDNRYASKAFLNEHLLKHQGLRKHVCQKCGARFAQASHLAAHRHVHGEKTHACPECGKKFNRRDNMKISEDDELPTCVCVKCIGALEFLCDFYSWCHRTQQNLEKKAKRIHSESDGSQFSTDDSDKENALPPKKRKWKAKVLELAKKVSEPVQLLEPEIPEKIAINKESVSPSASSGKDVAISSSSSEVLVPSQNEISISSEKEVSVPSRTETSDSFEKQLYIAVQKIPAVVKTASIVENAVPLTKEASVSLKPEIPNKEKDSKTPRTPEPKSNTDKNQNEETRRSGDNKSTTPLTAWLKGDSMSKTRKVSDSSVQDKGKISRLSDSKYGKISELMTPEQKNTIENFYRVDMSVVDVIKVANNMTIHSRNEIECNICKQKYNRMDKCQVHIWRHLDMTPYFCSACKFSTLTVSNIRCHIRKSHLKIKPFECHVCQKRYTSSTALDEHINTHTGAKPHQCSICSFSCSSRQILTNHYLTHKNLKDVVCDVCGKSFYSKARLRTHKFIHIKDTAFKCKYCSTYFMQEEALNKHYETAHAKDHECNICNKSYKSKKALNNHQNVHSEAKYQCTICPNRYKSQHILKEHLLKHKGIRKYKCTTCQKTFAQQSHLAAHMAVHIGIRYKCPGCKKGFNRHDNMKVHTKRCNDFINNPDLKDFFTTRVTTKTENVRSNETAMDNTSLSSINSTKTNLAADKQIVTKVEPDINSDNSDEDFFLYAEDDDESEKSADEELNTGRKISVTENILSPEYF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01393035;
90% Identity: -
80% Identity: -