Basic Information

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.18 2.3e+02 2.6 0.1 5 16 70 81 68 84 0.88

2 4 0.11 1.4e+02 3.2 0.0 2 18 86 102 85 111 0.74

3 4 0.0042 5.2 7.8 0.0 26 45 141 160 139 161 0.91

4 4 0.00024 0.3 11.7 0.1 2 44 167 213 166 215 0.75

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.18	2.3e+02	2.6	0.1	5	16	70	81	68	84	0.88
2	4	0.11	1.4e+02	3.2	0.0	2	18	86	102	85	111	0.74
3	4	0.0042	5.2	7.8	0.0	26	45	141	160	139	161	0.91
4	4	0.00024	0.3	11.7	0.1	2	44	167	213	166	215	0.75

Coding Sequence: ATGGCAcaagaaaaagtgaaaaaagtaaataaatcttCTGTCAGTGACATGTGTGATAATGACCCTGAATATTTACTTCAGGAGTACAGAAAGAAGGATAAACTCTCTAAGGCAGAAATacaaATGTTGCAGAACTTAAATGTACAACTTATTCACGAAGTGCCACCTCAACATGAAATCGAATCAAAAGCTGGATCTCACGCACTCACTAAAGAAGAgaaggaaaaatttaaaaagtacgCTGACTTAAAACAAGGTCCTTTTAGTCCTAATGaggataaaattatttgtaaaaattggaagaaattttgtaagAAACATGATTGGAACGTACAAAACTCTAAACCATTTTTGTATATGAAGCACGATCAAagagtaataataaaatttataagcgAGAGGAgaaaatttgtacaatttctaGCACGTAAATTACCCAATCGAAGTTTGTACAGTGTTTATCAACGGTTTAGGAAGTTATACAGTAATGTTGTTCACGGGAGGTTTACACGTGAAGAAGACAGTCATATCTTGAAGCACATAGAACAAAATCCCAATGTTAATCCAAACAATATGCATGCAGAATTAGCGAAAATAATACCTCGGTCGAGAGAAGCCATCTGGCGTCGTTATCAAGtgttaaaaagattaaagaaGAAAGCAGAAGAAGATTGA
Protein Sequence: MAQEKVKKVNKSSVSDMCDNDPEYLLQEYRKKDKLSKAEIQMLQNLNVQLIHEVPPQHEIESKAGSHALTKEEKEKFKKYADLKQGPFSPNEDKIICKNWKKFCKKHDWNVQNSKPFLYMKHDQRVIIKFISERRKFVQFLARKLPNRSLYSVYQRFRKLYSNVVHGRFTREEDSHILKHIEQNPNVNPNNMHAELAKIIPRSREAIWRRYQVLKRLKKKAEED

Sequence clustering based on sequence similarity using MMseqs2