Smag011166.1
Basic Information
- Insect
- Synergus magnus
- Gene Symbol
- ZNF131
- Assembly
- GCA_032275165.1
- Location
- JAUESH010000039.1:3453603-3459840[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 2.9 3.8e+02 2.6 0.2 3 20 367 384 366 389 0.87 2 10 6.4 8.4e+02 1.6 0.5 2 23 447 467 446 467 0.86 3 10 0.00086 0.11 13.7 0.4 2 22 580 600 579 603 0.89 4 10 0.012 1.6 10.1 0.0 3 23 619 640 617 640 0.94 5 10 0.076 10 7.6 0.1 1 23 657 681 657 681 0.92 6 10 0.0081 1.1 10.7 0.5 2 23 698 720 698 720 0.93 7 10 0.34 45 5.6 0.4 1 21 725 745 725 746 0.95 8 10 8.7 1.1e+03 1.1 0.3 2 17 765 780 764 786 0.79 9 10 4.3e-05 0.0057 17.8 3.1 1 23 804 825 804 825 0.98 10 10 0.00057 0.075 14.3 0.3 1 21 831 851 831 852 0.95
Sequence Information
- Coding Sequence
- ATGGAGGTTTACGAAGACGAGGATGACACCCACTTCTGTATAAAGTGTCAGGCGACAATTCAGGGCCTCGAGAATTATGTGCGTCATCGTCAGTCTGGATGCAGCACTAAAGAAGTCCATTTACCACCTTCAACCTCAGCAATATCGCCCGCAACAGTCTCATAcccagagattttaaatgcagACGCCTTCTTCAGTTCTCTGGAACTCCAGAGTAGTTCCAAGTCGAATCCTCGACGCACAACTTCAGCGGATAATTCAAGAAGATCTGGAAGAAATGAGGATCGAAAGCGAAAAAATCGGAAAGACAAAAGTCCTGAGGATTGCAGCTCTTCAAAGGAGAAACTCCACAATCTTTTGCCAGTCGTGACTGATCTTGATGATCCTACAGATCATCTTTGCATACCTTCTCTAGTTGGATTCCCTGATATAGTTGCAACCAGCAAACCATCATCTTCTGGAAAAGTAACTTGTCATTCACAGATGGTATCCTCTGGAAAGATAGAACACTCAGATTTCCATGGAAAGCATGATTCTATGGAAAGTATGACATCTAAACAGCTGGATAGAAAGCGTGAAGACTCTCATAGACTGGATGCGGATCATCAAGTCTGGCTAGAGGACACTCTCTTGGTCGACTTGGTGGGAAACTCAGTCAACAAAGACATATCGAATTCCAGTCTAAGCAGATTTGAGGATTTCGATTATCAAGAGGAGGAAACGGAAGAAGAGAGTTTGGAAGAGGATATGGAAGAAGAAGAATCGTTTTCTGAATCTGATAATGAAGATCAAGCGTATCCTCCTCGAGGCCACACAGGTGGTAAATGGAAGCCAGGACATGAAAGCGTTTCCCAAATGTCGCAGACGATATCACATCATCTCCTTGAGGAGGACGTAGAGATGATTATGGAAGATGAGGAGGAAGATCATCATCCTCCGCCATCCCACACCGGGGGGAAGTGGAAACCTACTGACAGCAATTCTATGCACaaaccCGAAGAGGAGGAAAGCAAGGGTGTCGAAGAGGAACCACCGCCGGGACACACGAGAGGGAAATGGGTACCCGGAGCACGTGCTGATATAAGCACAGGATATTGGTGTAATCCTTGTGGCAGGAATCTAGCTTCCCGTGTGCTTTACAAAAGGCACCTGGGCTCCTTTCTTCACGCCAGAAGAAGCATGCAGGATATGGACAGTACTGTACAGTTTCCCCAGTCACTCCACCGAAAAACCAAGAGACAAAAGGCTTTAGCTGCTAAGGCTGAGAAGAGTCCCGAGGACAATGACGAGGAACCGAACATGAAGAAGCGGCTTCGCAAAAGAGAAAAGGAATTCTTGACTTGTGAGATGTGTCGCACCCGAGTGCGTCGACCACAAATGGGGAAGCATCTACTTTCCCATTATCACTGTCGAGTAGCAGGTGCAAACCCTTATAGAGCGAAAGCTCAGCAATTCCTTTTGGAGAACATGGAGAACGTCGTTCGACAATGTCCTTTTCAATGTGCTCCCTGTCGGTTTTACTGCAATACAGAGGACACATTTTTGTTGCACTGGCGTTCTTCCTTGCACCTGTCGAGTATCAACAagatTGACGGAGGTTTTAAATGCAGTTCTTGTGCTTTCTGGTGTGAAGAGAACTCAACGATGGAGCTTCATCTCTTGAGTTCTTCTCATCGAGACCTAGTTGCGATGATGAACGGGTCAATTCCTGTTGTAATATCCAGACGGCGAAGTCTAGTGTGCAACACGTGCGACCAGTCTTTCAGATATAATATACAGCTGTCTCAACACGCGAGACAAACTGGACATGAAGTGGACTATACTGCCACTGATGAATATCAAAGACGGATTAATTGCAATGCTTGTGGTCTCGTGGTAAGATCTCTGGTTGCTCTACAACGCCATCAACTATCAGTGCATTTAAAGGGCGGCAAGAAGGACCGTGAAGCAAGTTCTGTTTCAGCGCCTTACTTTTGCTCTTTTTGTTCCTTGACTTTCGAAACAGCAGCAGCTGCTGTCATTCATAGGAGAACTGTAGCTCACAAGGAGATTGTTAAGGCGACCAAGTCGGACAATCCCATAACCATTAGAGAATGTTCTAATTGCAAGGAACAGTTTCGTACCCTTGTGGAATACAAAACGCATCTTCTCGAGGTTCATCCTGATCTCTGTTACAGatgtcCACAGTGTGCATCGATCTTTGCATTTCCGCAAGACGTCACAAAACACACCAAACACAGCAAATGctttctaaaagaaaagcaAACCGCTCCTGTACCCGACGTGGAATGGAAGTGTAATCAGTGTCCTTTCTCAACCGATTTACAATCCGAATTCATCTTCCACGAAGCTCTTCATGCTGGGCCGTTTGAATCCAATGAACCTGGGAGTAGTAAGACGTCAGGAAACTACCAATGTCCTCTTTGCAAAAAGTGCTTCAGCAAAGTCACTCTTCGAAATCACATCAGGGGTCACACCGGCGATCGTCCCTTTCCTTGTACGAGATGCAGTCAAAGTTTCGCCAGGAGGAATGACCTGAATATTCACCGGAAAATTTGCGAGGGCTTCTCATCTTCAAAATTGAAGGAGGGGGAGGGAATCTTCCATCGGCAGAGGGAATTCTCCTGCGCAGAGTGCAAAAACGCTTTCTTTACCAATTGTGAGAATGGGGGAgttagaaaaagagagaaggaAATAGAGAGGGTCAGAAGGGATCTCTATATTCATCTAGTGAAGTTGGTGTCTTGGGTAGAACGACAAAGGGAAGACAGAAGGCAGAAACGGGCAGATAGAGAAGCGGAAGCTGGAAGAGAGGTGTTCGGTATGAAGCGTGAAATAGAAGAGAAGCTCGTGGCTCGGCAGAAACTGGAGAGAAGAGGCGCACGCGCCCTCTGCCAGCAGGTCGTATTAACATCTCGCATCCTGCGTTGGCACGACTTTGCTGGTCAGCGCGTGTATAGACACCCTCCAGGATGCTCGGGTGCCATCCTGATCATAGTGTGCGTGTTGGAGATCTGCACGGAGCACGGCGAACAATGCGATGCTGCTGCGCGCTGGGATCAGGACAAGGGAGTGTTGGTGAGATGTCCTCTGGTTCGGTACCGACGTCCGCGTATACCGACACGGATGGTAGCCGATGGGGTTGATGCTGGTATTGGTACACGGTGTGGTACGGTTCGCTATGCCGTGGCAAGCGGTAAGCACGGCCCCGTATGCAGACAGTTTAGTGGTGACCGCCCCACGGAGTCCAGTTGTCGCGTGAAATATTGcgattcataa
- Protein Sequence
- MEVYEDEDDTHFCIKCQATIQGLENYVRHRQSGCSTKEVHLPPSTSAISPATVSYPEILNADAFFSSLELQSSSKSNPRRTTSADNSRRSGRNEDRKRKNRKDKSPEDCSSSKEKLHNLLPVVTDLDDPTDHLCIPSLVGFPDIVATSKPSSSGKVTCHSQMVSSGKIEHSDFHGKHDSMESMTSKQLDRKREDSHRLDADHQVWLEDTLLVDLVGNSVNKDISNSSLSRFEDFDYQEEETEEESLEEDMEEEESFSESDNEDQAYPPRGHTGGKWKPGHESVSQMSQTISHHLLEEDVEMIMEDEEEDHHPPPSHTGGKWKPTDSNSMHKPEEEESKGVEEEPPPGHTRGKWVPGARADISTGYWCNPCGRNLASRVLYKRHLGSFLHARRSMQDMDSTVQFPQSLHRKTKRQKALAAKAEKSPEDNDEEPNMKKRLRKREKEFLTCEMCRTRVRRPQMGKHLLSHYHCRVAGANPYRAKAQQFLLENMENVVRQCPFQCAPCRFYCNTEDTFLLHWRSSLHLSSINKIDGGFKCSSCAFWCEENSTMELHLLSSSHRDLVAMMNGSIPVVISRRRSLVCNTCDQSFRYNIQLSQHARQTGHEVDYTATDEYQRRINCNACGLVVRSLVALQRHQLSVHLKGGKKDREASSVSAPYFCSFCSLTFETAAAAVIHRRTVAHKEIVKATKSDNPITIRECSNCKEQFRTLVEYKTHLLEVHPDLCYRCPQCASIFAFPQDVTKHTKHSKCFLKEKQTAPVPDVEWKCNQCPFSTDLQSEFIFHEALHAGPFESNEPGSSKTSGNYQCPLCKKCFSKVTLRNHIRGHTGDRPFPCTRCSQSFARRNDLNIHRKICEGFSSSKLKEGEGIFHRQREFSCAECKNAFFTNCENGGVRKREKEIERVRRDLYIHLVKLVSWVERQREDRRQKRADREAEAGREVFGMKREIEEKLVARQKLERRGARALCQQVVLTSRILRWHDFAGQRVYRHPPGCSGAILIIVCVLEICTEHGEQCDAAARWDQDKGVLVRCPLVRYRRPRIPTRMVADGVDAGIGTRCGTVRYAVASGKHGPVCRQFSGDRPTESSCRVKYCDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01393102;
- 90% Identity
- iTF_01391575;
- 80% Identity
- -