Basic Information

Insect: Synergus magnus
Gene Symbol: -
Assembly: GCA_032275165.1
Location: JAUESH010000039.1:12508973-12512548[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.17 22 6.6 0.6 1 20 105 124 105 128 0.94

2 13 0.011 1.4 10.3 4.6 2 23 269 291 269 291 0.91

3 13 0.00031 0.041 15.1 1.8 2 23 374 396 373 396 0.95

4 13 6.3 8.3e+02 1.6 7.8 3 23 485 506 484 506 0.96

5 13 0.094 12 7.3 0.8 1 23 555 578 555 578 0.95

6 13 0.00017 0.022 16.0 0.6 3 23 628 648 627 648 0.97

7 13 0.00061 0.08 14.2 0.2 2 23 670 692 670 692 0.93

8 13 0.008 1.1 10.7 3.6 2 23 732 754 731 754 0.96

9 13 0.11 14 7.1 4.2 3 23 769 790 767 790 0.92

10 13 0.00016 0.021 16.1 0.1 2 23 835 857 835 857 0.93

11 13 0.07 9.2 7.7 0.9 1 23 936 958 936 958 0.98

12 13 0.0001 0.014 16.6 4.2 2 23 973 995 972 995 0.96

13 13 0.0047 0.61 11.4 0.4 1 23 1066 1089 1066 1089 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.17	22	6.6	0.6	1	20	105	124	105	128	0.94
2	13	0.011	1.4	10.3	4.6	2	23	269	291	269	291	0.91
3	13	0.00031	0.041	15.1	1.8	2	23	374	396	373	396	0.95
4	13	6.3	8.3e+02	1.6	7.8	3	23	485	506	484	506	0.96
5	13	0.094	12	7.3	0.8	1	23	555	578	555	578	0.95
6	13	0.00017	0.022	16.0	0.6	3	23	628	648	627	648	0.97
7	13	0.00061	0.08	14.2	0.2	2	23	670	692	670	692	0.93
8	13	0.008	1.1	10.7	3.6	2	23	732	754	731	754	0.96
9	13	0.11	14	7.1	4.2	3	23	769	790	767	790	0.92
10	13	0.00016	0.021	16.1	0.1	2	23	835	857	835	857	0.93
11	13	0.07	9.2	7.7	0.9	1	23	936	958	936	958	0.98
12	13	0.0001	0.014	16.6	4.2	2	23	973	995	972	995	0.96
13	13	0.0047	0.61	11.4	0.4	1	23	1066	1089	1066	1089	0.98

Sequence Information

Coding Sequence: atgacATCTTCAGTGGCCCAAGAAATTCGGCTACCGGAACCAGCTGATCCCGAACCAGCGGACAGCGATGGGTCCAGCAATGAGGACCGAGATGCGAGAAAACGTCTCCTTGGAGAAGCGGACTCTTCAGGACCCAAAAAGAGACGAAAACAAGCGACTCCTGTGAGGTTCCCAACTTCCCTCATGCTCGGTGATCATCCTGAGTCtgaggaagaagaggaagatgCAGATCCGGAAGGTAAGCCGAATTCGCCACGAGCGGAGGCGCTTCAAGGCCATCCAACAACGaaagatgaaaatttaaatatagaatTCCGGTGCCAGTACTGTAGTCAATTGTTCGATGGCAAATCAACCCTCGACCTCCACCTCGAGTGTGAGCACAATTTTGTAAACGCGTCCCACATACCTTCAGATAGCCAATCACCTCAGCCGGGAAGTCAAAGTCAAACGACTGTAGAAACGATCAATCAGCAATCTGatcaatctcttcatttacCTCATCTTCCCAATATCGAAATCAAAAACTTAGGCCCTTCCTGGTTCTCTGAGCATGTGCAGTCTCAGAATCATAATCAAAATCAAACGCAGACTCAAACCCAACAACAGAGTGAGGAATGGTCAGCAAACTGTCATATGAGTCCGATCACATCCATTCCAAATCATCTAACAGGATTGCCAAATTTTCCTGGAGGACTGCAACAGTATTTTCCGCTACCCCCAGGATTTACCCTTTCCGATTCTGGGCAGATCCATCGAACCACTTTGGGGCCAGCACCGGTGCGAATTTTTAATCCCGACGCTTACTGTGATCTCTGCAATAAGGAATTTTGTAACAAGTATTTTCTCAAAACGCACAAGGCTAACAAGCATGGTATTTATGTGGATCCTCCGAATCCGATGACAATGGGGGAGAACAATGTGGGGGTTGGACCACTTTATCCCATAGGACAAATGCCTGGAAACAATATTAAATTGGAATCCAATCAAAAATTAGAAGGTGTTCAAGTACCACAATTGCAACAGATTCCCCAATTAACACAACTGCCACAGATACAACAGCTGCCACAATTGTCACAATCACCTCAGATGCCACAACCACCCCCACCTCCAACCGTTCCCTGTGATATTTGCCATAAAAGGTTCCGAAGCGAGGAATCAGTTAGGAAGCACAAGCAAAAGGTGCACACTGTATCAGCATCAGAGGATCAGAAAAATCCTAATCATCAGGTCCAACAATCATCTGTAGCTGATGAGGAGAGGGAAATGCATCACCAAAGTCCTGGGGCAATGGAGATGCTCTTCAAACAAGAATATGGAGTTGAGCAAGAAGACAATGCATTCATGCCCCCACCGAGACATCTTTCCCCTCAAGCTATTCAACAAGCCAAAGAATCCAACTTCAGTGCCGAACGACTTCGCAGACTGGGGGTCTTAAATCCAGATGCGTTTTGCGAAATTTGTTGTAAGGAGTATTGCAACAAATTCACCCTACGTACCCATAAGATGAAGAGACATGGGATAGTGATCCAGGACAACGAAAAGCCACCACTCAATCCGGGATCAGCTGCCACCTGGCATCAAGTGCAAACCACCCCCTTGAACTTGATCATCAACGAGGCAGGAAGTGGCTCCGAGTACAGCGATAGATCAACTGACGATCACGAGTGCAAACCTTGTGGAATTCGTTTCCAAAACCTTGGACTATACGAATCTCATCGTCAAAGGGTTCATGCTGAAGAAACTTCTCCGAAGATCGAGTTTGATTCAGAGTCTGTGGAACAACGAATTACAAACAACGATGCCATCTCTGAGGATCTACAAAAACTCCAAACAATGATTTTACAACTGAATGGTCTCGAAACTAACAAGATCTCTGCATGTTCGGTTTGTGGGAAAGAGTGTGACTCCAAAGTTAGTTTAAGAGTTCATATGATGGAGCACGGTATCACGACAGAAGAGCCTGCATCACCATCTCAGGAAAAATCCTCAACACCCATTTCTGCATACTGTACCTTGTGCGAAAAAGAATATCCAAACCAAGAAGCTCTGAGGAAACATATCTCAGAAGATCACAAACAATCATACGATTCGACTCTTGTACCGCATGTACCATCTATTTCCATGCCCTCGACTCCAACATCAATTCAGGCATCCGAACGCAAAACTTCATCCTTAACTCCCACATCCAGTTACTGCGAAATTTGCAACAAGGAGCTGTGCAACAAGTACTTTATGAAAACCCACATGCAAAGGATGCATGGTATCGAAATTGAAAACGGGGCTCAGATCGGCGGAGTCATCTGCAACATCTGCAACAAGGAACTATGCAGCAAGTATTTCCTACGGGTCCACAAACACAATACCCATGGCATTGTCGAAGAAGGCTCAAATCTTGGAAATAAACAAGAAAACTTTGATCCACCAACTACAGAGGATACAGCTCTAAAACCCGAACAACTCGGTGATTTGAACCACAGATACTTCACTCATTTTACAGAGGTTTGTCCTATCTGTAACAGAAGATTCAGAAGCATCAAATGGCTCAAAGCTCACTTATTGGGTGACCATGGAAAAATGGGGATTGACAAATGGAGGGAATTGGAACAACAGTACCAAGCGAACCAGAGGACCAACAACAGACTAGCAGGAACTTCAAGACCCAATCAGCCAAATGCGCCTCTGAAGATACCTAATGGTTTCGAATCCTCCCAAACCAAGGTTCCCGATTTGACTGCAACCCTAGGGAACCAAGTACTCTCAAACTTATTCGGGTCATCAGTCGAAGATCAACAATCTAAAAGTTACAGATGCTCCTACTGCAACTTCGCCACAACTGTCTTACCTTTCCTCTTCCTCCATGAAAGATCTCACATCAATCCCCAAGAATCTGCAACCGAAAATGACAAATTCTTGCAGTGTCCTCTCTGTCCTCAAAGTTTTTCCCAACCAGAACACTTTCACCATCATCTTCTAACTCGTCACCAGTTCCCCAATATACTGTCCCAGTTTCCAGCTCCTATTTTCAACAACCTCAGGCTAGAAGCCTTTGGAGAAAAGAACAGCGATAccaaagagatagaaatggAACCCGAGGAGCAGAAGAATCCGAGTCCTCAAGCCCAGAACAATTTAAATGAACCGAGTATTCAAAAGCAAAATGATACAGCTGTACAGGTGACACCTCAGGGGGTCTATAAATGTGCACAGTGTGGATACGCGACAGCAAATTTGAATCGCATCAAAAAACACATCAGAAAAGATCACAAGGCATTTGGAGAACCGACGGAAAGTGTTATTGCAGAGTTAAGCAAAATTCTCAAGGAGGTTGCCAATAAGCACAAAGTTCCTGCAAGTTATGCGATGCCCCAAGACTTGAATTCGAATCCGGAGAAGACGATAATGCAACCTTTTTTGATTGAGGAGCAGCAGTTCTCCCCAAGTCAGGATAGCGGCACAACTGGAGGGGAAGAATCTGGACCTTTGAAGCGTTTTGCACCGGCCTTGGTCTACCTGCCAGTTAAGGCAAGAGTCAATGGATCCCTCACAGCATCTTTCACCTTGAGTCCTGCGTAA
Protein Sequence: MTSSVAQEIRLPEPADPEPADSDGSSNEDRDARKRLLGEADSSGPKKRRKQATPVRFPTSLMLGDHPESEEEEEDADPEGKPNSPRAEALQGHPTTKDENLNIEFRCQYCSQLFDGKSTLDLHLECEHNFVNASHIPSDSQSPQPGSQSQTTVETINQQSDQSLHLPHLPNIEIKNLGPSWFSEHVQSQNHNQNQTQTQTQQQSEEWSANCHMSPITSIPNHLTGLPNFPGGLQQYFPLPPGFTLSDSGQIHRTTLGPAPVRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDPPNPMTMGENNVGVGPLYPIGQMPGNNIKLESNQKLEGVQVPQLQQIPQLTQLPQIQQLPQLSQSPQMPQPPPPPTVPCDICHKRFRSEESVRKHKQKVHTVSASEDQKNPNHQVQQSSVADEEREMHHQSPGAMEMLFKQEYGVEQEDNAFMPPPRHLSPQAIQQAKESNFSAERLRRLGVLNPDAFCEICCKEYCNKFTLRTHKMKRHGIVIQDNEKPPLNPGSAATWHQVQTTPLNLIINEAGSGSEYSDRSTDDHECKPCGIRFQNLGLYESHRQRVHAEETSPKIEFDSESVEQRITNNDAISEDLQKLQTMILQLNGLETNKISACSVCGKECDSKVSLRVHMMEHGITTEEPASPSQEKSSTPISAYCTLCEKEYPNQEALRKHISEDHKQSYDSTLVPHVPSISMPSTPTSIQASERKTSSLTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVEEGSNLGNKQENFDPPTTEDTALKPEQLGDLNHRYFTHFTEVCPICNRRFRSIKWLKAHLLGDHGKMGIDKWRELEQQYQANQRTNNRLAGTSRPNQPNAPLKIPNGFESSQTKVPDLTATLGNQVLSNLFGSSVEDQQSKSYRCSYCNFATTVLPFLFLHERSHINPQESATENDKFLQCPLCPQSFSQPEHFHHHLLTRHQFPNILSQFPAPIFNNLRLEAFGEKNSDTKEIEMEPEEQKNPSPQAQNNLNEPSIQKQNDTAVQVTPQGVYKCAQCGYATANLNRIKKHIRKDHKAFGEPTESVIAELSKILKEVANKHKVPASYAMPQDLNSNPEKTIMQPFLIEEQQFSPSQDSGTTGGEESGPLKRFAPALVYLPVKARVNGSLTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00011446;
90% Identity: iTF_01389736;
80% Identity: -