Basic Information

Insect: Synergus magnus
Gene Symbol: -
Assembly: GCA_032275165.1
Location: JAUESH010000047.1:1983113-1997130[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.1e-06 0.00015 22.8 2.5 1 23 564 586 564 586 0.98

2 8 2.8e-05 0.0037 18.4 2.0 1 23 592 614 592 614 0.98

3 8 1.7e-06 0.00023 22.2 0.3 2 23 623 644 623 644 0.98

4 8 7e-06 0.00092 20.3 0.1 1 23 650 672 650 672 0.98

5 8 1.9e-07 2.5e-05 25.2 3.0 1 23 678 700 678 700 0.98

6 8 5.1e-06 0.00067 20.7 1.6 1 23 706 728 706 728 0.98

7 8 7.1e-05 0.0093 17.2 7.7 1 23 734 756 734 756 0.98

8 8 8.1e-06 0.0011 20.1 1.0 1 21 762 782 762 783 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.1e-06	0.00015	22.8	2.5	1	23	564	586	564	586	0.98
2	8	2.8e-05	0.0037	18.4	2.0	1	23	592	614	592	614	0.98
3	8	1.7e-06	0.00023	22.2	0.3	2	23	623	644	623	644	0.98
4	8	7e-06	0.00092	20.3	0.1	1	23	650	672	650	672	0.98
5	8	1.9e-07	2.5e-05	25.2	3.0	1	23	678	700	678	700	0.98
6	8	5.1e-06	0.00067	20.7	1.6	1	23	706	728	706	728	0.98
7	8	7.1e-05	0.0093	17.2	7.7	1	23	734	756	734	756	0.98
8	8	8.1e-06	0.0011	20.1	1.0	1	21	762	782	762	783	0.95

Sequence Information

Coding Sequence: ATGCCCAAAGGGGAGGTTCTTTTGGCACACAGTAAAGGCGTGGAATATTGCGAGCCAATCACAGTGATCCTGGCAGAAGTTGAGGGACCAGAACTCGCTGCAATCTTGGGTTTCGTTTACACCGGAAGTGCAACGGTACCACGACTGAgattaaatgcatttttaagaGCAGCAGAAGCTCTTCACATTCAACTTCCACCACTTCCGGTggttatgaaaaattgtatagcGGATTACAAGCCCGAAGACGTCAAAGACGTGAAAATTAGTACAAATTATCTCGAGTGTAAACAATACCCATCAAATGAAAGGTGGTTCCGacctagaaaaataattcctcCCTATGATGAAGCTTTGAACAAAAAGGAGACAATCTCTCCAagttttgatgatttttcaaGATCAGTTTCTCATCCTGATCCTAAAATTTTTCGGGGACCCGAATCTCCTATAAAATATCGGAACAACCTAATGTTTGAGAACCAACTGCGAGTGGAGACTAATTATTGGCAGACTAATCACGAGAGTGTTTTAAATTCAGACAGAGACCAAAGAAGTGTCGATTGTTCGGAAAAAACGAGGTCAAACTCAATCAAGGAGCACATGGTATACACACCGGAAGTTCTTGATGTGACCAATGTTTCTTATTTATCGAAAAGACCTTGTGAACTTGGTCCTGAGAATGTTGATGCCCTGGAGCTGAGAATCTCGAACGATCCTTGTAGATTTGAGTCTACAAATAATCGCAAATCAAGGGAAGATACATCTCGACTACCAAACCTTGGAGTTGTTTCTGATGGAAGTTATCAGATAAGGGAAAGGTTGGAGGAGAGATTTTTCGAGCAGAGGGTTCCGCCATTGTATTATGCGACAATTGGTACATCTAGCAGTATAGAAAGACTCGATTATTCGCAAACTGGTGAAGATTTGACCTGTGGAGAAAGTTGCTGTAGGTGGCGACCTCCAAGAAGACATGTGGCCAATCAGGTGACAGCATCACCTTGGAGGCAACTTGCAAGGCCTCATCATTCGCCAAAAATTCAACCCATCGTCATGCAAAGTCCTTTATTAGACACACCTATGTCAATGGAGGCCCAAGCAACAATTTCACCTTCTTGCAGTCCATCCGACTCTCCAAAATCATACGCTGCAGTGAATAATCGCTTTACTCAACAAATTCTTGCATCTCCTGAAAGAAGATCACCAAGTGAAGAAGAATCGCTCACAAAATCGAGTCAAGATAGTCgacaagaattttatttaactccCATTCCGGGACCAATTGCTCAACCTGTCATACTTCCTTCAATGCCCAGAACAGTTCCACCTTTTTATCCAAATTCAACACCTCTAACATCAACAAGgcctttttatgaaaatgaaacCACCCAAAGTGCCACTAATCACATAACTCCAATTCGTCcaagtccaaaaaaaatttactttggaCATAAAAACTGCCAAAAACCGGAAATCTCGCATCCGATCAGTAGACTTTGCGACTTGATTCAACCGAAAGAATCTGTGGAACGCATTCCTGCGGAACCATCAATGGAGACGAAAATCGAAGTCGAAAATCAGTGCAGTGATAAAATTGCAACCAGTTTATCCGTCCTTAGCGATAGCAACAATAATGAAGCGAGTGGGGATCAATTTCTTCGAGCTAGAAACAATTCCACTTCCGAGGATCATCGATGCGATCAATGTGGAAAGACTTTCGTCACCAGAGCATCATTAAAGGTCCACAGCAGGACGCACTCGGGTGAAAAGCCGTTTCGTTGTGCGGACTGCGGGAAGCAGTTCTCCCAGCTTCGGAACTACAAGTACCATCGAAGCGTGCACGAAGGCACCAGAGAGTTTGCTGCTACTTGTCCGGAATGCGGTAAATATTTCAACGATCGAGGATACCTGAGCTCTCACATGAAGATCCATCGAAATCGGAAGGAATATGCGTGCGGAGAATGCGGTAAGAGCTTCAATCAACGAGTAGCCTACAATATGCATGTGCGAATTCATACAGGTGTCAAACCTCATCAATGTGACCAGTGTGGCAAAGCATTTTCGCGAAAAATGTTGCTTAAGCAGCATCTTAGGACCCACTCTGGAGAGCGACCATACGAATGTCAAGTTTGTCACAAAGCTTTTGCTGATAGATCGAACATGACGCTTCACACGAGACTTCACTCTGGCTTGAAACCTTATCAGTGCACACTTTGCACAAAGGCTTTCACGAAAAAGCATCACCTGAAAACTCATCTTAATTATCACACTGGTACTAAACCTTACTCGTGCCCAAATTGTGGCCTCAGGTTTTCTCAGAGCAGCAACATGAGAACACATTACAAAAAATGCGCGATCAACAATCCTAATGGAGTTAGGAACAACCAGAATGAGTTGGCTGTTTCTTCGAGCAGTCTTGACGCAGAAAATCAGAAGATTTTGGTgcaaaatattgtcaaatcaCCTACTGCCCTCACGCCTCCGAATTCTGATCAAGAATCTAGTGTATTGACACCGATATCGAGGACTGTAGTGTGTGAAACAAGGAAAACGTAG
Protein Sequence: MPKGEVLLAHSKGVEYCEPITVILAEVEGPELAAILGFVYTGSATVPRLRLNAFLRAAEALHIQLPPLPVVMKNCIADYKPEDVKDVKISTNYLECKQYPSNERWFRPRKIIPPYDEALNKKETISPSFDDFSRSVSHPDPKIFRGPESPIKYRNNLMFENQLRVETNYWQTNHESVLNSDRDQRSVDCSEKTRSNSIKEHMVYTPEVLDVTNVSYLSKRPCELGPENVDALELRISNDPCRFESTNNRKSREDTSRLPNLGVVSDGSYQIRERLEERFFEQRVPPLYYATIGTSSSIERLDYSQTGEDLTCGESCCRWRPPRRHVANQVTASPWRQLARPHHSPKIQPIVMQSPLLDTPMSMEAQATISPSCSPSDSPKSYAAVNNRFTQQILASPERRSPSEEESLTKSSQDSRQEFYLTPIPGPIAQPVILPSMPRTVPPFYPNSTPLTSTRPFYENETTQSATNHITPIRPSPKKIYFGHKNCQKPEISHPISRLCDLIQPKESVERIPAEPSMETKIEVENQCSDKIATSLSVLSDSNNNEASGDQFLRARNNSTSEDHRCDQCGKTFVTRASLKVHSRTHSGEKPFRCADCGKQFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYACGECGKSFNQRVAYNMHVRIHTGVKPHQCDQCGKAFSRKMLLKQHLRTHSGERPYECQVCHKAFADRSNMTLHTRLHSGLKPYQCTLCTKAFTKKHHLKTHLNYHTGTKPYSCPNCGLRFSQSSNMRTHYKKCAINNPNGVRNNQNELAVSSSSLDAENQKILVQNIVKSPTALTPPNSDQESSVLTPISRTVVCETRKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00200951;
90% Identity: iTF_01389610;
80% Identity: -