Basic Information

Insect: Synergus magnus
Gene Symbol: -
Assembly: GCA_032275165.1
Location: JAUESH010000008.1:363099-367081[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00026 0.034 15.4 3.9 1 23 229 251 229 251 0.98

2 11 0.023 3 9.3 11.8 1 23 257 279 257 279 0.95

3 11 6e-05 0.0079 17.4 6.6 1 23 285 307 285 307 0.99

4 11 0.00041 0.055 14.7 1.6 1 23 313 335 313 335 0.95

5 11 1.3e-06 0.00017 22.6 1.9 1 23 341 363 341 363 0.97

6 11 2.7e-05 0.0036 18.5 1.1 1 23 369 391 369 391 0.97

7 11 5.9e-05 0.0078 17.4 1.5 1 23 396 418 396 418 0.97

8 11 2.4e-05 0.0031 18.6 0.0 1 23 424 446 424 446 0.96

9 11 0.00026 0.034 15.4 0.2 2 23 458 479 457 479 0.96

10 11 9.1e-07 0.00012 23.1 2.0 1 23 545 567 545 567 0.98

11 11 2.6e-05 0.0034 18.5 4.6 1 23 577 599 577 599 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00026	0.034	15.4	3.9	1	23	229	251	229	251	0.98
2	11	0.023	3	9.3	11.8	1	23	257	279	257	279	0.95
3	11	6e-05	0.0079	17.4	6.6	1	23	285	307	285	307	0.99
4	11	0.00041	0.055	14.7	1.6	1	23	313	335	313	335	0.95
5	11	1.3e-06	0.00017	22.6	1.9	1	23	341	363	341	363	0.97
6	11	2.7e-05	0.0036	18.5	1.1	1	23	369	391	369	391	0.97
7	11	5.9e-05	0.0078	17.4	1.5	1	23	396	418	396	418	0.97
8	11	2.4e-05	0.0031	18.6	0.0	1	23	424	446	424	446	0.96
9	11	0.00026	0.034	15.4	0.2	2	23	458	479	457	479	0.96
10	11	9.1e-07	0.00012	23.1	2.0	1	23	545	567	545	567	0.98
11	11	2.6e-05	0.0034	18.5	4.6	1	23	577	599	577	599	0.97

Sequence Information

Coding Sequence: ATGTGTACCACTCCCGGCAATGCAGGTGCTGGGTTCGGGTATGCCTGGTCGTTCGGCGGGCCTGGTACCGAGACTCGCGAGAACACTCAGAGTGACCTCACGACGAACATCAGCTACGCTGTCAACAATAACCAAGATCAGGGTTCCAGTCAAAAAATCCAAGTGGACATCAAACCCGCTAAGATCGCTAACAGTGCCCACCGCCGTCCCATGTTCGCGATGAATGAAAGTTGTCAACAGACGCCGACGACCCACCATGGCCACACAGGAGCACACAATCAAACGCACGGTACGCACGTGCGAACCAAAAAGCATCACGACGTATTTTCCTTGACCTGCGATAAAGGTGGTTGCAATTGCGACGCCGCTCACCCCACGCCCCCACCTTCATTATTTCCAAATACTTTAGTTTTTACCACAGCAGATAAGCACGCCATGAGCAAGCATTTCATGACTCCCCTCGGACCGCTGCAGTTAACCGCGGAAGAGTGCAATGAAATCCTCATGAAGAGGGCAGCAGCCGCCTCCAACCAAGCCAACGCCAACAATGTAGCGGCTAGTCAAACGGACACCTCAACCCACTTCGGCCACGTCCTCACCCATGTCAACACAACCCAGATCGAGACCAAGGTCAAGACGCAACAGGACATGGGGAGTCAGGTTCGCGTCCCCAAGGAGAGGCCGTACTCTTGTTCCGAGTGCGGAAAGTCGTTTCTCCTCAAACATCATCTTACAACGCATGCGAGGGTTCACACAGGGGAAAGGCCCCACATTTGTGTGCATTGTGGCAAAAGTTTCGCGCACAAACACTGTCTTCACACTCATCTGCTTCTGCATAGTGCGGAGAGACCATATCAGTGCCGCGAATGTAAAAAGTCCTTCACACTGAAACACCATTTAGTAACGCACACTCGTGTTCATACGCGGGAACGGCCGTTCGTATGTCAGGAGTGCGGCAGAGCTTTTCCTTTGAAGCGTCATCTAGTGACCCATAGCAAATTCCATTCCGGAGAGCGACCCTTTGTGTGTGAGGAGTGCGGAGAGTCCTTCTCGCAGAAAGACCACCTCACGATGCACTCGCGCTTCCACGGCAGTTTACACCCATTTGTTTGTCACGACTGTGGCGCCACTTTCCAGAGGAAATTCGAGTTGGTCAATCATGGCAGGCTACATGGTAGAGTACCACATTCATGTAACGTATGTGGAAAGGAGTTCTTGCAGAAGAGAACATTGTTGGCTCACATGCGGCTGCACACTGGGGAAACGCCTTTTGCCTGCACAGTGTGCGGAGAAGCATTCCCGAGGAAGGCGGACCTAGTCGCACACTCCAagatacataataataatacggATACTGACGAAAAGTCACTCACTTGCAGGGAATGCGGTTTGGGGTTCCAGAATCGGGAAGCACTCACGTTGCATTTAAGGTTACATTCTGGTGACAGGACACTAGTAACTGACCTCTGTGGTCTAGCAGCAGCCTTCCAGCAATCTCCAGGACACTTCCTCACTCCCAACACCTCCGGCACTCACCAGATGAACGGACCGATTGGAACTCCAAGTGTGAGTCACATGCACGGTGCAACGCAGACCTCTCCTCCAGTGGGCTCAGGACCCAAACCAAAGCCTCACGTCTGTCCTGACTGTGGTCGTGGCTTCGCACAGAAGCACGGGCTCTCTCAGCATCAACGTCGTCACTCGGACGGAAGTTGTCACATAAGGTCGCACGTTTGTGACAAATGTGGGAAAGCATTCTTCCAAAAGAATCACCTCTTGCTACATCAGCGACAGCATATGGATCCGCCACCTAGCATATTGCGCCAACAACAGAGACAAGCGGCTCAAGCGGCTGCTCAGCAAGCCcagcagcagcaacagcaGCAACAAAATCAACAGCAGCAGGTGCAGCAACAGCAACAGGTGCAACAACAGCAAGTTCAACAGCAGCAACAGCAGACGTGTACCGTTGACACGAAAGCGATTCAACTGCAGGCCATACAGCAGCAAGTACAGCAGCAGGTTCAACAACAGGTtcaacagcagcagcagcaacaacaacaacaacagcagcagcagcaacaacagGCTTGCGCGGTGGACACGAAAGCAATACAATTGAACGTCACCATGTGA
Protein Sequence: MCTTPGNAGAGFGYAWSFGGPGTETRENTQSDLTTNISYAVNNNQDQGSSQKIQVDIKPAKIANSAHRRPMFAMNESCQQTPTTHHGHTGAHNQTHGTHVRTKKHHDVFSLTCDKGGCNCDAAHPTPPPSLFPNTLVFTTADKHAMSKHFMTPLGPLQLTAEECNEILMKRAAAASNQANANNVAASQTDTSTHFGHVLTHVNTTQIETKVKTQQDMGSQVRVPKERPYSCSECGKSFLLKHHLTTHARVHTGERPHICVHCGKSFAHKHCLHTHLLLHSAERPYQCRECKKSFTLKHHLVTHTRVHTRERPFVCQECGRAFPLKRHLVTHSKFHSGERPFVCEECGESFSQKDHLTMHSRFHGSLHPFVCHDCGATFQRKFELVNHGRLHGRVPHSCNVCGKEFLQKRTLLAHMRLHTGETPFACTVCGEAFPRKADLVAHSKIHNNNTDTDEKSLTCRECGLGFQNREALTLHLRLHSGDRTLVTDLCGLAAAFQQSPGHFLTPNTSGTHQMNGPIGTPSVSHMHGATQTSPPVGSGPKPKPHVCPDCGRGFAQKHGLSQHQRRHSDGSCHIRSHVCDKCGKAFFQKNHLLLHQRQHMDPPPSILRQQQRQAAQAAAQQAQQQQQQQQNQQQQVQQQQQVQQQQVQQQQQQTCTVDTKAIQLQAIQQQVQQQVQQQVQQQQQQQQQQQQQQQQQACAVDTKAIQLNVTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01131010;
90% Identity: iTF_00879928;
80% Identity: -