Basic Information

Insect: Synergus magnus
Gene Symbol: -
Assembly: GCA_032275165.1
Location: JAUESH010000015.1:7863455-7866492[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.22 29 6.2 0.5 2 23 128 149 127 149 0.96

2 15 0.022 2.9 9.3 0.2 2 23 154 175 153 175 0.97

3 15 9e-07 0.00012 23.1 1.0 1 23 181 203 181 203 0.98

4 15 3.8e-07 5e-05 24.3 0.4 1 23 244 266 244 266 0.98

5 15 1.9e-05 0.0025 19.0 1.3 1 23 272 294 272 294 0.98

6 15 2.7e-05 0.0035 18.5 4.1 1 23 300 322 300 322 0.97

7 15 8.1e-07 0.00011 23.3 1.7 1 23 328 350 328 350 0.95

8 15 3.3e-05 0.0044 18.2 0.6 1 23 356 378 356 378 0.98

9 15 2e-05 0.0027 18.9 7.2 1 23 384 406 384 406 0.97

10 15 2e-07 2.6e-05 25.2 0.8 1 23 411 433 411 433 0.97

11 15 5.9e-05 0.0078 17.4 1.1 1 23 439 461 439 461 0.97

12 15 2.3e-06 0.0003 21.9 4.6 1 23 467 489 467 489 0.96

13 15 1.3e-06 0.00017 22.6 1.3 1 23 495 517 495 517 0.98

14 15 1.8e-05 0.0023 19.0 0.6 1 23 523 545 523 545 0.99

15 15 2.9e-05 0.0038 18.4 1.0 3 23 553 574 552 574 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.22	29	6.2	0.5	2	23	128	149	127	149	0.96
2	15	0.022	2.9	9.3	0.2	2	23	154	175	153	175	0.97
3	15	9e-07	0.00012	23.1	1.0	1	23	181	203	181	203	0.98
4	15	3.8e-07	5e-05	24.3	0.4	1	23	244	266	244	266	0.98
5	15	1.9e-05	0.0025	19.0	1.3	1	23	272	294	272	294	0.98
6	15	2.7e-05	0.0035	18.5	4.1	1	23	300	322	300	322	0.97
7	15	8.1e-07	0.00011	23.3	1.7	1	23	328	350	328	350	0.95
8	15	3.3e-05	0.0044	18.2	0.6	1	23	356	378	356	378	0.98
9	15	2e-05	0.0027	18.9	7.2	1	23	384	406	384	406	0.97
10	15	2e-07	2.6e-05	25.2	0.8	1	23	411	433	411	433	0.97
11	15	5.9e-05	0.0078	17.4	1.1	1	23	439	461	439	461	0.97
12	15	2.3e-06	0.0003	21.9	4.6	1	23	467	489	467	489	0.96
13	15	1.3e-06	0.00017	22.6	1.3	1	23	495	517	495	517	0.98
14	15	1.8e-05	0.0023	19.0	0.6	1	23	523	545	523	545	0.99
15	15	2.9e-05	0.0038	18.4	1.0	3	23	553	574	552	574	0.94

Sequence Information

Coding Sequence: ATGAATGTAAAGAATATATGGATGGAGCACAAGCCAGCTAACAGTATTGTGAGTATTTTGTTCAAAGAGGGTACTGGAAAATCTGATTCTGGCTTCATGGAGGATATTTGTTCtgccatttttgaaaaagcgtTATTATCTATGGAGAATCATGAAGTGGACTTCTCTGATGAAATGGTCAAACTGGACCTGGAAGGAGAGACGAGTACCCATCAAAACTGGGTAACTCAAATCGCAAATACAAATCTCTGCGACAAGGAAGACGGATCCCTTCAGCGAAGTTTAATAAACGTAGGTTTTGGCTCCATAATCCAAGAAGACTTCCGCGAAAAGCTGCAATTCCTGCCAACAAGTCctcaacaacaaaaattttgcaaagtcCAATGCtctatttgcaaaaaatggTTCCTGAACAATGACTCTATGGTAACTCACCTAAAACTCCACTGCAGTGGAAATCGTTGCGAAGTCTGCGAAGAAAATTTCCTCGACACTGCGACTCTCTACACTCACATGTTAACCCACATGGGGATGAACTTGTTCGAGTGCAACatttgccaaaaaaaatttccctccAAATTGAGTCTCCGCAACCACATGCAAGTTCACTCTCTcgaaaaagaattcgaaaacgagcttgtaaaaaaattcgacaCAAAAATTCAGGAGGAAATTTACcacgagaaattaaattctaccCTCAGTCAAAATTCCGTCAAAGAAAGGTCTTTTTCCTGCGATATTTGCGAGGTGTCCTTCAGAGAAAAGGGGAATTTAAATCGCCATATGCTGACCCACTCCGAAGAAAAGACCTACAAATGCGACCTTTGTTTCGCTTCTTTTAGACAAAAAGGCAAGTTAAATATCCACATGACTTCTCACACTGGGAACAAACAATTCAAATGCTTGATGTGCCACAGATGTTTCGCCCAGAAGAATGCTTTGAATAATCACATGCTAGCTCACAGTGAAGAAAAACCTCATGCTTGTAATATTTGCGATAAGACTTACAAAAGAAAATCCGAATTGATAAGACACTCAATGGTTCATACTGGGGAGAGACCTTACGAATGTAAAGAATGTCTGATGACCTTTAGAGAAAAAGCAAAACTGAATTCTCACATGTTGGTTCACACTGGTGAAAAACCTCACGAGTGTCATATTTGTCACAAGGCGTGTGCAAGGAAATCTGATTTAAATAGTCATATGCTTTCTCACACTGGGGGACAGTACGACTGTACAATTTgcgaaaagatttttactaGGAAGTCGGATTTAAACAGACATACTCTGATTCATACGGGGGAGAAACCATTCGCTTGTGAACATTGCGATATGGCTTTTAGAGAAAAGACAAGACTGAATTCCCATATGCTTGTTCACACTGGTGACAAGAGACACGCTTGTCATATTTGCCAAAAGTCGTTCAAGGAGAAGGCAATGCTGAAAAAGCACATGCTAACTCATATGGGCGATCGACCTTATGAATGCTACGTGTGCCAAAAAACTTTTACCCAAAAGACGACGTTGAATAGTCATATTTTAATACACGAGGGTGAGTCTTCCTATGAATGTAGCACTTGTAATAACGCTTTTAGAGATAGAATTGCGTTGAAAAAGCATTTACTGACACATGCTGGGGATAAATTTAATGACTGTCCGATTTGTTTGAAGAAATTCACGCACAGATCGGCTTTGAATAATCATATTGCGAATTCGCATAGTTCCTGA
Protein Sequence: MNVKNIWMEHKPANSIVSILFKEGTGKSDSGFMEDICSAIFEKALLSMENHEVDFSDEMVKLDLEGETSTHQNWVTQIANTNLCDKEDGSLQRSLINVGFGSIIQEDFREKLQFLPTSPQQQKFCKVQCSICKKWFLNNDSMVTHLKLHCSGNRCEVCEENFLDTATLYTHMLTHMGMNLFECNICQKKFPSKLSLRNHMQVHSLEKEFENELVKKFDTKIQEEIYHEKLNSTLSQNSVKERSFSCDICEVSFREKGNLNRHMLTHSEEKTYKCDLCFASFRQKGKLNIHMTSHTGNKQFKCLMCHRCFAQKNALNNHMLAHSEEKPHACNICDKTYKRKSELIRHSMVHTGERPYECKECLMTFREKAKLNSHMLVHTGEKPHECHICHKACARKSDLNSHMLSHTGGQYDCTICEKIFTRKSDLNRHTLIHTGEKPFACEHCDMAFREKTRLNSHMLVHTGDKRHACHICQKSFKEKAMLKKHMLTHMGDRPYECYVCQKTFTQKTTLNSHILIHEGESSYECSTCNNAFRDRIALKKHLLTHAGDKFNDCPICLKKFTHRSALNNHIANSHSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01389646;
90% Identity: iTF_01389646;
80% Identity: -