Basic Information

Insect: Synergus magnus
Gene Symbol: -
Assembly: GCA_032275165.1
Location: JAUESH010000020.1:19734211-19741608[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00013 0.018 16.3 2.2 1 23 444 466 444 466 0.96

2 18 1.9e-05 0.0025 19.0 1.9 1 20 472 491 472 494 0.94

3 18 3.1e-05 0.0041 18.3 0.7 1 23 500 522 500 522 0.98

4 18 7.7e-05 0.01 17.0 4.4 1 21 528 548 528 550 0.95

5 18 2.4e-05 0.0031 18.7 4.6 1 23 556 578 556 578 0.99

6 18 2.4e-05 0.0031 18.7 5.3 1 23 584 606 584 606 0.97

7 18 9e-06 0.0012 20.0 7.1 1 23 612 634 612 634 0.97

8 18 8.8e-08 1.2e-05 26.3 2.7 1 23 640 662 640 662 0.98

9 18 6.5e-05 0.0085 17.3 6.7 1 23 668 690 668 690 0.97

10 18 2e-05 0.0026 18.9 5.8 1 23 696 718 696 718 0.98

11 18 5.3e-07 7e-05 23.8 2.9 1 23 724 746 724 746 0.98

12 18 7.9e-06 0.001 20.1 7.8 1 23 752 774 752 774 0.98

13 18 2.5e-05 0.0033 18.6 9.1 1 23 780 802 780 802 0.98

14 18 3.3e-05 0.0043 18.2 7.5 1 23 808 830 808 830 0.98

15 18 0.0016 0.21 12.9 8.8 1 21 836 856 836 858 0.94

16 18 1.2e-05 0.0016 19.6 0.4 1 23 864 886 864 886 0.98

17 18 0.029 3.8 8.9 4.5 1 23 896 918 896 918 0.98

18 18 4.6e-07 6.1e-05 24.0 1.3 1 23 924 946 924 946 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00013	0.018	16.3	2.2	1	23	444	466	444	466	0.96
2	18	1.9e-05	0.0025	19.0	1.9	1	20	472	491	472	494	0.94
3	18	3.1e-05	0.0041	18.3	0.7	1	23	500	522	500	522	0.98
4	18	7.7e-05	0.01	17.0	4.4	1	21	528	548	528	550	0.95
5	18	2.4e-05	0.0031	18.7	4.6	1	23	556	578	556	578	0.99
6	18	2.4e-05	0.0031	18.7	5.3	1	23	584	606	584	606	0.97
7	18	9e-06	0.0012	20.0	7.1	1	23	612	634	612	634	0.97
8	18	8.8e-08	1.2e-05	26.3	2.7	1	23	640	662	640	662	0.98
9	18	6.5e-05	0.0085	17.3	6.7	1	23	668	690	668	690	0.97
10	18	2e-05	0.0026	18.9	5.8	1	23	696	718	696	718	0.98
11	18	5.3e-07	7e-05	23.8	2.9	1	23	724	746	724	746	0.98
12	18	7.9e-06	0.001	20.1	7.8	1	23	752	774	752	774	0.98
13	18	2.5e-05	0.0033	18.6	9.1	1	23	780	802	780	802	0.98
14	18	3.3e-05	0.0043	18.2	7.5	1	23	808	830	808	830	0.98
15	18	0.0016	0.21	12.9	8.8	1	21	836	856	836	858	0.94
16	18	1.2e-05	0.0016	19.6	0.4	1	23	864	886	864	886	0.98
17	18	0.029	3.8	8.9	4.5	1	23	896	918	896	918	0.98
18	18	4.6e-07	6.1e-05	24.0	1.3	1	23	924	946	924	946	0.97

Sequence Information

Coding Sequence: ATGAATAGCGAGCAGCATGCGCTGCCAGCGACTACGCAGGCACAGCAAGAGGAAGTAAATGCAGTTCAAGGCAGTCGCCCTTCGTACCCTGGTGGTTTGGCTACTGCGACCAGTCTTGGAAATGTAGGGAATACCCCGCATTCGTCTGCGGACCTGCGTGTAGGTACTGCAGTAGCGTTAGCTTCCTCAGTAGCCAAATATTGGGTCCTCACCAATCTATTTCCTGGACCAATACCCCAGGTCTCAGTTTACCACCATCCCCACCATAACTCCTCGCATAGAGGTGGTGGAGGTGGGGAAGCTCCTTCTAAAGAGTCATCATCCTCACTCAACCAGGAGATGGCCTTGGCCTCCAGTTCCCATCATCAGAACACAGCTTCgcatcatcatcatcaacCTCCTGTTAGTACCAGCAGTCATCACAGTTCGTTGCAGTCCAATTCACAGCAGATCCCAGTTTCTCTTCCTGGTTTGAATCTGGACGGAAGTCATATTCCAACGAGTCATTTACAAGCTGCGCATGCTCAGATGCAGCAGCAGATGCAGTCCCAACAACAGCAACAGCAGTTGCATcagcagcaacaacagcaATCCcaacagcagcaacaacaacaacaacaacaagcACATCATCAGATGCAGAATCACCAGAATGCCCAGAATAATGCACAAGCTGGGCAGAATCAGAATTCCCAGAGAGACGATAAGGTTAAGGACGAGAATGGAAGCTGTACAACGGAACGTTGCAGTGACAATCAGGTACATTGCCAGGTGCAATGCGATCTTCAGTTGCAAGCTCCTCAGGATTTACACCAGAGCCTGATgcagcagcaacaacagcaACAGATTGGCGTCAATATTAGTGGTTCTGGAGGTGACAGTGGGAACCAAAATAATTCCGAGAAAAATTCGGACAAGAAGGAGGATATGAGACAACTTAATATGGCGCAgTTCCAAGTTCCAGATTTAAAACCCGGTGGTCACATGATGGATGTGAGAACAGCTGATGGCTCAGTTGTGAAAATCAGTGCTGGAAACGAACAAGATTTGGCTAAAACATTAGGTGTTGAGATGGTACAAAATATGTACAAGGTGAATGTCGAGGACATTAATCAGCTCTTAGCCTATCATGAAGTTTTCGGAAAGCTACAGAGTGAAATAGCTGCAGGAACGACCTTAGTTGGAGGAACGGTTCCTACGCAGACAGTTACCACAATCCAAAATGGAACTCCCATAGTGCAACAAGTTCAGCTGAACAAATTCGACATAAAGACGAACGACGGAGAAGCTACACCCGGACCTAGTGCCTCTCCTGTTTCAGTGGGAAGCCACAACTGTGATgtttgtggaaaaattttccagtTCCGGTACCAGTTGATTGTACATCGCAGGTatcacacggagagaaaaccATTCACGTGTCAGGTCTGTGGAAAAGCTTTTTCGAATGCAAATGATTTAACCCGCCATGGAAAGTGTCATTTAGGAGGATCTATGTTCACTTGCGCAGTATGCTTCCACGTTTTCGCCAATGCACCGTCTTTGGAACGCCATATGAAACGCCATGCAACTGACAAGCCATACAATTGCACAGTGTGTGGTAAAAGCTTTGCTAGGAAGGAGCATCTGGACAATCACACTCGATGCCACACTGGAGAAACGCCATACAgATGTCAATATTGTGCGAAGACCTTCACTCGCAAGGAACATATGGTTAATCATGTTCGCAAACACACTGGCGAAACTCCGCATCGATGCGATATCTGCAAAAAGAGCTTTACGCGAAAAGAACACTTTATGAATCATGTGATGTGGCACACTGGAGAAACACCGCATCACTGCCAAGTTTGTGGAAAAAAGTACACTCGTAAGGAACATCTAGCCAATCACATGCGCTCTCATACCAATGACACTCCCTTTCGATGCGAGATTTGTGGTAAGTCGTTTACGAGGAAGGAGCACTTCACGAACCACATAATGTGGCATACAGGCGAGACACCACATCGCTGTGACTTCTGTTCAAAGACGTTCACGCGAAAGGAGCATCTCCTGAACCACGTTCGACAGCACACGGGTGAGTCTCCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGAGAGACACCCTTCCGCTGTCAATACTGTCCGAAAGCTTTTACGCGGAAGGATCATCTGGTGAACCACGTCAGACAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCATTCACGCGGAAGGAACACTTGACCAATCACGTGCGTCAACACACAGGCGAGTCACCACATAGGTGCCACTTCTGCTCCAAGTCCTTTACCCGCAAGGAGCACTTGACCAATCATGTTCGTATCCATACTGGTGAATCACCACACAGATGTGAATTCTGTCAGAGGACCTTCACCAGGAAAGAACATCTCAATAATCATCTCCGTCAACATACCGGAGATTCTTCACATTGTTGCAATGTTTGCTCCAAGCCCTTCACCCGAAAGgAACATCTCGTTAATCATATGCGATGTCACACCGGGGAACGTCCCTTCGTGTGCACCGAATGTGGAAAGAGCTTCCCTCTAAAAGGCAATTTGCTGTTCCACATGCGATCCCACAATAAGGGAAGTAATGCGGAAAGACCTTTCCGCTGCGACCTCTGCCCCAAAGATTTCATGTGCAAAGGTCACTTAGTTTCCCACAGAAGATCTCACTCCGATGAGCGTCCACACAGTTGTCCCGACTGTGGAAAAACCTTCGTTGAGAAGGGAAATATGTTGAGACATTTGAGGAAGCACGCCGCCGAGGGACCACCTACTCAAGTTAGCACTCCCTCAGCAATTCCACAACCTGGAGTGTTGCCTGTTCTTGTTGGACATCCACTGGCGCCACCCGCGCCCTCAGTCGTTCCACAACCTGTTGTCGTACCCACTCCTCCCGGTGTCCTCACCTCTTACTGA
Protein Sequence: MNSEQHALPATTQAQQEEVNAVQGSRPSYPGGLATATSLGNVGNTPHSSADLRVGTAVALASSVAKYWVLTNLFPGPIPQVSVYHHPHHNSSHRGGGGGEAPSKESSSSLNQEMALASSSHHQNTASHHHHQPPVSTSSHHSSLQSNSQQIPVSLPGLNLDGSHIPTSHLQAAHAQMQQQMQSQQQQQQLHQQQQQQSQQQQQQQQQQAHHQMQNHQNAQNNAQAGQNQNSQRDDKVKDENGSCTTERCSDNQVHCQVQCDLQLQAPQDLHQSLMQQQQQQQIGVNISGSGGDSGNQNNSEKNSDKKEDMRQLNMAQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTNDGEATPGPSASPVSVGSHNCDVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSTPSAIPQPGVLPVLVGHPLAPPAPSVVPQPVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01066407;
90% Identity: iTF_00200974;
80% Identity: -