Basic Information

Gene Symbol
Snapc4
Assembly
GCA_032275165.1
Location
JAUESH010000043.1:9789487-9792155[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 4.3 7.1e+03 -2.0 0.1 3 14 175 186 174 188 0.88
2 6 1 1.7e+03 -0.0 0.0 14 43 224 258 221 261 0.74
3 6 9.5e-05 0.16 12.9 0.3 3 44 269 312 267 314 0.87
4 6 1.4e-08 2.3e-05 25.2 0.2 2 43 321 366 320 369 0.95
5 6 9.9e-13 1.6e-09 38.5 0.0 1 44 375 419 375 421 0.93
6 6 1.2e-12 2e-09 38.2 0.3 4 45 428 469 426 470 0.96

Sequence Information

Coding Sequence
ATGAGCGATACAGAGGACCAACTTATCCTCGAGGACATCCGAGCATTGGAAGATGCTTTATCCCGGACAAATGCATCACGCCCTATACACGAAGTTTCgctcaaaaaagaaattattcctTCCAATGATCAACCTCCACAAGAAGTCGAAATCCATTCAATCAATCATTTTCCAACCTCTAAATCTGTTCCAGTAAATAACGAAGAATACAGCGAAAACCACATTGAAGATACTACCAATTCTGTCAGTGCATTAGAACTTAATCAAAAGCTAATTGAACATCTGATCGCTACTCGTAGCGAAGTCGTTGCAATTCTCGATGAATGCAAAAGAAAAAGGGGAGCtgtcaacacaaaaattaAACAGCGTTTAAGAATGCAACCagctaaaagaattttatcttCGCACGCTGGCATGCCTTACTTCAAagataaagattttttcatgGCTCCTGAAAATGAGgacacaaaattaaaaaaagctaGAGGtgaattgcaaataattaaccTTCGACGTGTCTCTCGCTGGACAGTAAAAGATAAAGAGACTCTTCTGAAGACTATTTACCATGAAGTGCTCTCCAACATGAAGAATCTTGATGAAAAAGAGATGGATACGGTTGAAAAAATGACTTTGAGGAAGACCCACTCTTTGCcaacttttgttttaagtGCCATTGGACATCTAGGGGAGAGAGAATTTGATTGGATGAAGATTGCTGTGACAGACTTTCAAAGTAAACATTCTCCAGAAGAATGTCGCGTTATGTGGAACGTTTTTTTGCATCCGGATATCAATAAGTTCAAGTGGAAAACTAAAGAGTTGTCGAATTTGCATAATCTTGCCAAGAAcaataaatatcaaaactGGACTATGATTGCCAAGGATTTaggtaCTCAAAGAAGCGGCTATCAGTGTTTTGTAAAATACAACAGCACCAGAAAGTCTCAGGATAATGAAAAACCTTGGGTTAAAAATGAGGACAGAAAGGTCACGCACCTcgtaaacaaattcaaaatcggCGACTTCATCAACTGGGGAGACGTCGCAAGCTGCATGGAAAACCGAACCAAACAGCAAATTTACTTCCGCTGGATGTATAGTCTCGCCCCTCACCTAAAAAAGGGCAGATTCACCGATGAAGAAGACAAGCTTCTAATAGACGCTATTGATAAGTACGgtaccaattttaaaaaaatatctacccTCGTCCTACCAGCTAGGACTTCCGCCCAGCTGAGCGATCACTACAACACCATCGCCAACAAGGAGCAAAACATCTGGACCCTCCAACAAGACACACAGCTTCTCGAATTGTATGAAAAACACGGAAACAATTGGGCCAAGATATCAACTTTATTTGAAGACAAAAGCAGAGTTCAACTTCGTCATCGATATTCTTCCCTCCTTCGATATCAAAAAAGAGGAATTCCACTCACTGAAATTCCTCggttaaatttacaaaacaaacaAATAAGGCAATCTCTCGTCTTTCATAAAGTGCCGAGAAACATTAACCAAAATCAACCCCAGAAAGTTAACGAGGTAGACAAAGAAATAATCGAATATTTTCACAAACTCAATGTTGTTCCTTCCAAAGTCGGTCGCAGGCAAAAGTTTTATCATCCAAATGAACTTGAGATCACCACCAAGAAAATATACAACATTCTTGAACTTTTACATGCAAAATTGAATATTCCCTACGATTTAGACGAATACGATTGTCTGTCTGAGAAAGACAAGCAGCTTTTAAATTCGCTGAAAAATCTTCCTCACAATGCAGTGCATGGATCATTTTCCAGACATATGGAACATATGCGAGTCACTATGTTTGGGCATGATCAACAAGAAGAGAATCACTTTGTACCACCTTTGCCCTTTGGGACTGTTTCGAAGGGAgataaaattcatcaaatgaTAAACTACAGTCTCTTCATCGACCAGAAGTTTTTTCAAGAACGAGATATGACCTTCAAAACACCGTACAATATCATCGAGCCAATCGGTGAAGATGTGAATTATGAATTTGACAAACTTGGCGAGCTACTTGCCAGAAAGAATTACAAATACGagaaacaaattataaatagtATTTATGTATTGACGCCTGATGAATTGGCAAGGAGGGAAATGAGAAATCGAGACAAGGCTGTACGGAATTATCATTTACCAAGTACCTCGAGTGTTTCAAATTCAGATGTCATGGTTCTAGGTACTTACCAAAACTCCTCTACGAGTAATTATCCCGATGCAAATAATTTCCCTTCGatgaaaccaaatttttggacGATACGTGGTTATCAGAAAATTCTCGatgtaattaaagaaatgaatcCGGAGGATAATGTGATCGATTGTCCGGTacctaaaatgaaaatgaacgAGAGGGGGAAAAAAGCTTTAGATATGCTGAGAATGCGTttgattcaattatttaagtaCCCTATTATTATGTCTCAAGTCATGCCGCCGGAGTTTTTCCACGAAGCAGCAGAGATTTTCAACCAGGCAGCTAAAAGGAAAAGTGAATCTAGAAACACTAGTAAATCTGGGAAAAggcaaaaaattcaagaggcTGATACATAA
Protein Sequence
MSDTEDQLILEDIRALEDALSRTNASRPIHEVSLKKEIIPSNDQPPQEVEIHSINHFPTSKSVPVNNEEYSENHIEDTTNSVSALELNQKLIEHLIATRSEVVAILDECKRKRGAVNTKIKQRLRMQPAKRILSSHAGMPYFKDKDFFMAPENEDTKLKKARGELQIINLRRVSRWTVKDKETLLKTIYHEVLSNMKNLDEKEMDTVEKMTLRKTHSLPTFVLSAIGHLGEREFDWMKIAVTDFQSKHSPEECRVMWNVFLHPDINKFKWKTKELSNLHNLAKNNKYQNWTMIAKDLGTQRSGYQCFVKYNSTRKSQDNEKPWVKNEDRKVTHLVNKFKIGDFINWGDVASCMENRTKQQIYFRWMYSLAPHLKKGRFTDEEDKLLIDAIDKYGTNFKKISTLVLPARTSAQLSDHYNTIANKEQNIWTLQQDTQLLELYEKHGNNWAKISTLFEDKSRVQLRHRYSSLLRYQKRGIPLTEIPRLNLQNKQIRQSLVFHKVPRNINQNQPQKVNEVDKEIIEYFHKLNVVPSKVGRRQKFYHPNELEITTKKIYNILELLHAKLNIPYDLDEYDCLSEKDKQLLNSLKNLPHNAVHGSFSRHMEHMRVTMFGHDQQEENHFVPPLPFGTVSKGDKIHQMINYSLFIDQKFFQERDMTFKTPYNIIEPIGEDVNYEFDKLGELLARKNYKYEKQIINSIYVLTPDELARREMRNRDKAVRNYHLPSTSSVSNSDVMVLGTYQNSSTSNYPDANNFPSMKPNFWTIRGYQKILDVIKEMNPEDNVIDCPVPKMKMNERGKKALDMLRMRLIQLFKYPIIMSQVMPPEFFHEAAEIFNQAAKRKSESRNTSKSGKRQKIQEADT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01392694;
90% Identity
-
80% Identity
-