Smag010410.1
Basic Information
- Insect
- Synergus magnus
- Gene Symbol
- bab2
- Assembly
- GCA_032275165.1
- Location
- JAUESH010000036.1:4665805-4667612[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-11 1.4e-08 35.1 0.0 1 45 346 391 346 391 0.95
Sequence Information
- Coding Sequence
- ATGGAGACCGAACCTCAAAAGTTCTGTCTGAGGTGGAACAACCATCAATCaaatttgattcaattttttgatgaaTTACGGAAAAAGGAAGACTTCACTGACGTCACTTTGATGTCAGATGCTAGGGAGATAATAAAATGTCACAAAATAGTGCTGGCTGCCGGTTCCTTCTATTTCGAAAGAGTTTTTAACAATGTAGGATTTCAAGATGCAACGACTCTCGTCCTAACTCACACAAATTTTACGCTACTTGAGGCCCTAATAATGTATATGTACCGAGGAGAAATAAACATACAACAGGACGAATTATCGGCTTTGTTACAAGTCGCCGAAGAACTTGAGGTCAAAGGTCTTATCAATTTTGCGGAAAAAGGATCAATGACAAAGATCAAGAGAGACGAGATTCCATCACCATTTTTGaatcaTTCTCCACCACCACCTGCACCATCGACAACACCACAGCTAAAACTTGAGAACAGTGGACAACTTGCGAATCCTTTATCGCATGcagatttatataattttcatgcAGCCAATCAGAGTATAAATCAAATTCCCTCTCATGGACTTTGGCCGATGCCTGCTTTTCCGTTCGCTCAACATCCGTACCATCCTCATTATTCAGCATTGAGCAGATCCTATATCCATAGTTCTGATACTTCACCCCTgacgaagaaaaagaagatttcGTCGGCATCAATGGCCATTATGCCTACGCCTACTCCCATTTTACGGACGGCACTTGTTGGCCAAGAAGTTGTGGAAACAGCACATTCCACATCGGGATCGAACTTGGAAAATGTGGAAAATGGATCTCGAAGCAATGGTTCAGCCAATGGTTCTGCCAGTGGTTCTGCCACTTCTCCCATTGATAACGACAGAAGATACAGCACGGACTTTTCTCATCATGAAGACCCTATGAGTCCTCACACCGATATGGAAGATGATGATAGGAAAAATTCTCCAGGATCACgACGCAACAGTTTCGCCTCCAGCTCAACAGCTCCCAGGGAGTGGAAGCGCTACAAGCAGTACACTCGGGAGGACATCAACGCTGCCATCGATGTGGTCAAAGCAGGAGAAATGAGTGCTCTCAGAGCATCTCGAAGATTCAACGTGCCATCTCGCACGCTGTATGATAAGGTAAAGAAATTGGGAATTAGAACTCAGCGACACTCAGGACGACATTCATCCAGAAATGGAAACGGAAACACAAACGGAATGAGAATCCGTAACATTGATAACGACAGTGCTCGTTTTCCGTATGGCGTAGGAGGCAATGCTGATGGTAATATTTATCGAAATGCGTATGGAGGAGTTGAGCCGATGGATATGTTAATGAATATGAAACACATCAGTCCAAGCACAAGTCCGAAAGCTGAGCCTCTTATAGAGGatgataatttggaaaatatggTGGAAGATTTGTCCATCAAAGCCCCATTACAGAATAGCGTCACTATTCGTCCCTTAACTCCCAAAGAGGAATTGAAAGACGAAACACCTGCGCCAAATGAGAACTGA
- Protein Sequence
- METEPQKFCLRWNNHQSNLIQFFDELRKKEDFTDVTLMSDAREIIKCHKIVLAAGSFYFERVFNNVGFQDATTLVLTHTNFTLLEALIMYMYRGEINIQQDELSALLQVAEELEVKGLINFAEKGSMTKIKRDEIPSPFLNHSPPPPAPSTTPQLKLENSGQLANPLSHADLYNFHAANQSINQIPSHGLWPMPAFPFAQHPYHPHYSALSRSYIHSSDTSPLTKKKKISSASMAIMPTPTPILRTALVGQEVVETAHSTSGSNLENVENGSRSNGSANGSASGSATSPIDNDRRYSTDFSHHEDPMSPHTDMEDDDRKNSPGSRRNSFASSSTAPREWKRYKQYTREDINAAIDVVKAGEMSALRASRRFNVPSRTLYDKVKKLGIRTQRHSGRHSSRNGNGNTNGMRIRNIDNDSARFPYGVGGNADGNIYRNAYGGVEPMDMLMNMKHISPSTSPKAEPLIEDDNLENMVEDLSIKAPLQNSVTIRPLTPKEELKDETPAPNEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01391333;
- 90% Identity
- iTF_01393682;
- 80% Identity
- iTF_01393682;