Basic Information

Insect: Synergus laeviventris
Gene Symbol: -
Assembly: GCA_032275145.1
Location: JAUESI010000035.1:1313438-1320197[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.3e-06 0.00058 20.9 1.2 1 23 158 181 158 181 0.97

2 15 0.42 58 5.2 0.2 3 23 245 266 243 266 0.88

3 15 0.65 88 4.6 6.1 1 23 295 318 295 318 0.95

4 15 0.00047 0.063 14.5 0.3 2 23 354 376 353 376 0.90

5 15 0.003 0.4 11.9 0.5 1 23 718 740 718 740 0.98

6 15 0.014 1.8 9.9 0.5 5 20 829 844 827 846 0.91

7 15 2.1e-05 0.0028 18.7 0.5 1 23 996 1018 996 1018 0.99

8 15 0.11 15 7.0 0.5 6 23 1029 1046 1029 1047 0.95

9 15 0.42 58 5.2 0.8 2 20 1052 1070 1051 1072 0.91

10 15 9.3 1.3e+03 0.9 1.1 1 23 1114 1137 1114 1137 0.91

11 15 6.1 8.3e+02 1.5 0.3 2 12 1141 1150 1141 1161 0.70

12 15 0.0009 0.12 13.6 2.7 1 23 1166 1189 1166 1189 0.90

13 15 0.0014 0.19 12.9 5.9 2 23 1195 1215 1195 1215 0.98

14 15 0.001 0.14 13.4 2.8 2 23 1220 1242 1219 1242 0.93

15 15 0.0022 0.3 12.3 0.9 2 20 1250 1268 1249 1270 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.3e-06	0.00058	20.9	1.2	1	23	158	181	158	181	0.97
2	15	0.42	58	5.2	0.2	3	23	245	266	243	266	0.88
3	15	0.65	88	4.6	6.1	1	23	295	318	295	318	0.95
4	15	0.00047	0.063	14.5	0.3	2	23	354	376	353	376	0.90
5	15	0.003	0.4	11.9	0.5	1	23	718	740	718	740	0.98
6	15	0.014	1.8	9.9	0.5	5	20	829	844	827	846	0.91
7	15	2.1e-05	0.0028	18.7	0.5	1	23	996	1018	996	1018	0.99
8	15	0.11	15	7.0	0.5	6	23	1029	1046	1029	1047	0.95
9	15	0.42	58	5.2	0.8	2	20	1052	1070	1051	1072	0.91
10	15	9.3	1.3e+03	0.9	1.1	1	23	1114	1137	1114	1137	0.91
11	15	6.1	8.3e+02	1.5	0.3	2	12	1141	1150	1141	1161	0.70
12	15	0.0009	0.12	13.6	2.7	1	23	1166	1189	1166	1189	0.90
13	15	0.0014	0.19	12.9	5.9	2	23	1195	1215	1195	1215	0.98
14	15	0.001	0.14	13.4	2.8	2	23	1220	1242	1219	1242	0.93
15	15	0.0022	0.3	12.3	0.9	2	20	1250	1268	1249	1270	0.93

Sequence Information

Coding Sequence: ATGATGGATAGAATAACACCCCAAGTTTTAGAGAGCTTTACAAATTCTGAAGTGAAAACCGTTGTCGCTACAACATGCGATGAAGTTACAATCAAGCAAGAAATCCAAGATATCACCGATGAAAACTTTGAAGTTCAGCCTACAATATCGACAGGATCTGTGATTAgtGATGTCAATATGGGttacgaaaaaatgtattccttTCACAAAGAAGGCTTCAATTTGAAAGACTGTTTTATTCGTCTCGAAAAATGCGATAAAATCTGGGAAACTCTGAAAGTTATAAAGAATCTCCAGCTCGCACATCCCAACGAAACGAACATTGAGAATTATGCAGCCGCTGTCCAGGATGCTATGCACAGTAATTCGAAGCCCTCGACACCAGAACCGATGCAGTACCATCCCGTCTTAAACAACGGAAATGCTGCCTTACCCAATTTTCAGTTCGCCATCAAGAGCTGGAAACGTTTGTATACTTGTACCTATTGCGGAAAGCAATATACCGAGAACCGAAATCTAAAATTGCACATGGCAAAAGTTCACTCTATAGCTCCTGTCTCCAAAAAAGTACATGTACCTAAGGAAGTTCCtcttaataatgaaattttacgtCCTCTAGATATTTCCCGTTCCAAGGAATTTTCTAGTCCTAAAGAAGTTTCTCAAATCAAGGAATCTACTGGAACCAAGGAAATTTCTCAgcctaataaaaattatttgaagccACAAATCTGCCAAACGTGTGGCAAAAAATATGCAGATGGACGCTCGGTGGCTTCTCACTCTCTCCGTGTGCACGGAATTTTAACCGAGTACCACGAAAGATGGTTAGCTCAACAGGAAAATCCCAGCGACTACACCGTCGAAGATTTACTCAAACGACACTCCTGCAAAACTTGTGGTAAAAGGTACAGCTGCATGAAAAGTTTGCGTTTGCATTATTTGCGGGTACATAATGTGATTATTCCTATGATGCGAGGAGGGCGGAGTTCAACCTCCTTCATGTCATTGCCGAAAAAAGCAGCAACACATTCCGGTGATATGCAAAAGCACATGAACGTCTGTAATATCTGCGGGAAAAAATACACCAAAAACTGGTATCTACGTGTCCATTCACTCGAAATTCATGGCATTCCCATGCCTTGTGGCAAAGTGAATCCAAACTTCCCTTCTAAGCTGCgggttataaaaaaagaaattatcgAAGAACCCTCAACTCCAAAAGAGGAACAGAAGTTCTCTCCAGCcgtaaattcctcaaaatcaaatcaaaacCATAAGTTAGGTGGATCTGATAATCTCCAATCCCCAATCATACCGGCGcgagtattaaaaatgtaccaATGTACGGCTTGTAAAAAGGAATTCCTCGCTATTTCCAAATTACGCTCTCATTGCTTTTCTCGTCATGGAATCGTAATACCGAGGCTTCGGAAACCCTATCGGAAGAGTAATTCTGTACCTGTAAAGATTGAGTTTGAGACAAAGATTAAGTTAGAGGAAAAAAGACAACCTCAAGTTTCGACTCCAAAGCAAGTCAGTCTGGACCGATACTTCAGAAGCCCACCCAGTGGAGGAAACAGATCGAACACTATCAGTCCGAACTTACCTGCATCACAGAGTGGTCCTACAAGAGAAAAAGTCGTTAAGCAAATAGTATCGCCAAGGGAAACAGTTGCTCCAAAGGAAAGTTCTCCAGCTTCAGCGAGAGTAAACTCTCATTCGAAAGAAAAGGTTTTGAAAGTACCAACAGAGTTTGTTAAGTGCAATTTGTGTTCTCGGGCCTGTAAAGACATCAGGAAACACTATATTGCTTATCATAAAATTCGTTATCCCGATTCTGTGATGGAAGCTCCATTCTTCGTCAGTGAAGCAGTTGGAAGCACTGCAACCCCGGCAGTTGTTCCTGAAAAAGAACCAGAAACACAAGAAAAGCTTTCAACAAATAAACCCCCGAAGAAGAAAAGACGTCGATTTTTCACAATGATGCCGAGAAAAAGGCGCAGGAATGAAGAACctcagaaaaaattacagaatccGGCGGTCGAGATTCCAGTTATTCGAAGTCCAGTAGCTCCAattcctgaaataaaaaattttggagtCCAGGGTCCCGATACAAAAGCGATGTCTGACCCTGCCAAATCAGAGTTTAAATGCACAATCTGCGACGGATACTACGCAAGTGCTAGAAGCTTGAGAATCCAcagagaaaaacataaatcCAAGGGTGAGACTAAAGAGAACATTCACCTTATTAAGCatcattataaaaatggaTGGAAGACAACGAAGAAGGACGACATGTCAAACATCGATGAATCTGCACTAAGCATGGATATGGATGTAGATGTGGATGTTGAGAATGACTCTTCAACGTCTTATAATGAAAGCGTTGCGCAGTCGTCTAGTTCGGAATCGAGGGATAGTAATCGAAGATCGACAAGGAGTACAAGCTTTTACACTTTAAGCGAAATTACTTGCGAATGCGGAAGGTCCTTCCGCGATCCTCATACGTTGTTCGTGCACAAGGAGAAGTGCAGAACAGCGCATAGAAtcgaaagagaaaaattgatgGTTACGAGATCCAGTAGCGATCGGGATTCTGGAATTGGAATAAGTATTAcgataaagaagaaaaatgattcGTATGAAATAGTCAGCAGAGATAGTGGAGACGATGATAAATCTAAGGATTCTATTACTTCGAAGGAAATGGATCAGATGTCCCGTTCTTCCGATACTAATTCCTCTAGCTCAGTCTTCAACGGTAGGAAGTACTCTAATCTGGTGCCGGTGCAATGCAGTAAGGACCACAGCATACTAAAGATTCAGGTTGCGGAAGATGACGAGGATGTAGACATCGAGGAGGACAGTCAAATAAACGTGCCTGAGCCCGAACCCATCAACGTAGACACACTCGAAAGGCAACatgaatctcttgaaattgagAGCAGGATGACAGATCCCTTAGATGTGGACCTTTACAGATGTGCAGAATGCCTTGAATTTTTCCGAAAcgaagaagatttaaaaaagcacATGATCACTCATGAAAAACGTCCTGCTCGACAAGAATGTCCATGTGGAAAGACCTTTAGAGGGGCTCAAAGTTTTCTCATCCACGTAAAAGAACATCATCCTCTCTGGCTTCAGTGCGGATATTGCAACGcgaacttttcaaatattaaagggTATTACGCACACACTTGCCAAGTAAATCAAGGAAAAGATTTCCAAGATCTACAAGAGATTACCTGCAATATTTGCGAGTCTAAAGTCAAGATGGTACACTTTGATGCTCACGTAAAACGAGAGCACTTGGTTCCCAAAGCTCCCTATTTATGCTATTTTTGCGAAATGCGATTCTTCAGTGTCATTCAAAGAAGAGCACACTTGACTAAAGATCACACAAAACCCTCCTGTAAAGTTTGTGGCAAAATTTTACGATTTGATTTTGTAGCAAAGCACGAGGCTTATCATGACGGTCTTGGTTATCCTTGTCATATTTGCAAAAAAGCTTTCTCTTCTCCAAAACACGCGAATAGTCATAAATATGAAGTTCATGTCAGAGAAGATGAACAGtgcaaaatttgtaaaaaagttttcaggCGTAGGCACATGAGATATCATATGCGAATGCATTCTGGCAAGGAtagttgtaaaatttgtaataaaggTTTTCACAATAACCGTTCATTACAAGATCACATTCATTTGATACATGCAAACGATTATCCATTTGTAAAATGTGATAATTGTCAATTGTCCTTTACATCTGAAAGGTATCTTAAACGACATTTTAATCAAGGTTTATGCAAGCATGTTAGtaaaaaatcgaatgaaaTAGAAAGTGAGGAGTTTGAAGAAAGTGAGGAGGAAGATGCGGAAGAGGGGAACACCGAGGAGAGTGAAACTGAAGAAGTGGACGTAACTGAGGAAGTGGACGAAACTCAGGACGTGAAGAACGTTTTCAAAATACAAGCTACTTTGAACAAGAAAACTGAGAAAAGCAAACAAACAGAGGTGAGAGAGACTTTACAGGAAGTAACTTTGATTACAGAAACGAATGGAGAAACAGAAATTTCTGAAGAGGAAGAAACTGTGGTGCTGAACGTATCTGAGGATATACAAGAAacggaagaaataaaaatgaaggagGTGAACTTTCCtgagaatgtaaaagaaaCTACGAAACCAGAAGAAATTTCGTTGATCAAAGAAACCGaggaggaaaaagaaaattcagagaaaagaaaaatttcagagcCAGAAGTAGTGTTGAAGAAAGAAGATGCTTTAGAGAAGCACGAAACTTCGCTGAAGGGAACTAATGAGACGATAGCAAAGACTTTGGAGGAGGATATAGTTTCATAG
Protein Sequence: MMDRITPQVLESFTNSEVKTVVATTCDEVTIKQEIQDITDENFEVQPTISTGSVISDVNMGYEKMYSFHKEGFNLKDCFIRLEKCDKIWETLKVIKNLQLAHPNETNIENYAAAVQDAMHSNSKPSTPEPMQYHPVLNNGNAALPNFQFAIKSWKRLYTCTYCGKQYTENRNLKLHMAKVHSIAPVSKKVHVPKEVPLNNEILRPLDISRSKEFSSPKEVSQIKESTGTKEISQPNKNYLKPQICQTCGKKYADGRSVASHSLRVHGILTEYHERWLAQQENPSDYTVEDLLKRHSCKTCGKRYSCMKSLRLHYLRVHNVIIPMMRGGRSSTSFMSLPKKAATHSGDMQKHMNVCNICGKKYTKNWYLRVHSLEIHGIPMPCGKVNPNFPSKLRVIKKEIIEEPSTPKEEQKFSPAVNSSKSNQNHKLGGSDNLQSPIIPARVLKMYQCTACKKEFLAISKLRSHCFSRHGIVIPRLRKPYRKSNSVPVKIEFETKIKLEEKRQPQVSTPKQVSLDRYFRSPPSGGNRSNTISPNLPASQSGPTREKVVKQIVSPRETVAPKESSPASARVNSHSKEKVLKVPTEFVKCNLCSRACKDIRKHYIAYHKIRYPDSVMEAPFFVSEAVGSTATPAVVPEKEPETQEKLSTNKPPKKKRRRFFTMMPRKRRRNEEPQKKLQNPAVEIPVIRSPVAPIPEIKNFGVQGPDTKAMSDPAKSEFKCTICDGYYASARSLRIHREKHKSKGETKENIHLIKHHYKNGWKTTKKDDMSNIDESALSMDMDVDVDVENDSSTSYNESVAQSSSSESRDSNRRSTRSTSFYTLSEITCECGRSFRDPHTLFVHKEKCRTAHRIEREKLMVTRSSSDRDSGIGISITIKKKNDSYEIVSRDSGDDDKSKDSITSKEMDQMSRSSDTNSSSSVFNGRKYSNLVPVQCSKDHSILKIQVAEDDEDVDIEEDSQINVPEPEPINVDTLERQHESLEIESRMTDPLDVDLYRCAECLEFFRNEEDLKKHMITHEKRPARQECPCGKTFRGAQSFLIHVKEHHPLWLQCGYCNANFSNIKGYYAHTCQVNQGKDFQDLQEITCNICESKVKMVHFDAHVKREHLVPKAPYLCYFCEMRFFSVIQRRAHLTKDHTKPSCKVCGKILRFDFVAKHEAYHDGLGYPCHICKKAFSSPKHANSHKYEVHVREDEQCKICKKVFRRRHMRYHMRMHSGKDSCKICNKGFHNNRSLQDHIHLIHANDYPFVKCDNCQLSFTSERYLKRHFNQGLCKHVSKKSNEIESEEFEESEEEDAEEGNTEESETEEVDVTEEVDETQDVKNVFKIQATLNKKTEKSKQTEVRETLQEVTLITETNGETEISEEEETVVLNVSEDIQETEEIKMKEVNFPENVKETTKPEEISLIKETEEEKENSEKRKISEPEVVLKKEDALEKHETSLKGTNETIAKTLEEDIVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01393846;
90% Identity: -
80% Identity: -