Basic Information

Insect: Synergus laeviventris
Gene Symbol: ttk
Assembly: GCA_032275145.1
Location: JAUESI010000038.1:11337362-11356680[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.1e-06 0.00015 22.7 2.5 1 23 615 637 615 637 0.98

2 8 2.8e-05 0.0037 18.3 2.0 1 23 643 665 643 665 0.98

3 8 1.7e-06 0.00023 22.1 0.3 2 23 674 695 674 695 0.98

4 8 7e-06 0.00095 20.2 0.1 1 23 701 723 701 723 0.98

5 8 1.9e-07 2.5e-05 25.2 3.0 1 23 729 751 729 751 0.98

6 8 5.1e-06 0.00069 20.7 1.6 1 23 757 779 757 779 0.98

7 8 7e-05 0.0095 17.1 7.7 1 23 785 807 785 807 0.98

8 8 8e-06 0.0011 20.0 1.0 1 21 813 833 813 834 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.1e-06	0.00015	22.7	2.5	1	23	615	637	615	637	0.98
2	8	2.8e-05	0.0037	18.3	2.0	1	23	643	665	643	665	0.98
3	8	1.7e-06	0.00023	22.1	0.3	2	23	674	695	674	695	0.98
4	8	7e-06	0.00095	20.2	0.1	1	23	701	723	701	723	0.98
5	8	1.9e-07	2.5e-05	25.2	3.0	1	23	729	751	729	751	0.98
6	8	5.1e-06	0.00069	20.7	1.6	1	23	757	779	757	779	0.98
7	8	7e-05	0.0095	17.1	7.7	1	23	785	807	785	807	0.98
8	8	8e-06	0.0011	20.0	1.0	1	21	813	833	813	834	0.95

Sequence Information

Coding Sequence: atgaTGGGGGAAGTGATTCGCGTTTCCGGAAGGGCGCCGGATGTGGGGGATTTCCTGAGGGAAGCTATGTTGTCTCAAAGATTCGCTGATGTTGCGCTGTGCTGTCCAGGAGGTCAAAGGTTTCTCGCTCATCGATTGGTCCTTTCTGCTGCAAGTCCATATTTACAAGAGGTTCTTTTGGCACACAGTAAAGGCGTGGAATATTGCGAGCCAATCACAGTGATCCTGGCAGAAGTTGAGGGACCAGAGCTCGCTGCAATCTTGGGTTTCGTTTACACCGGAAGTGCAACGGTACCACGACTGAgattaaatgcatttttaagagCAGCAGAAGCTCTTCACATTCGACTTCCACCACTTCCGGTGGTTATGAAAAATAGTGTAGCAGATTACAAGCCCGAAGACGTCAAAGACGTGAAAATTAGTACAAATTATCTCGAGTGTGAACAATACCCATCAAACGAAAGATGGTTTCGACCTAGAAAAGTCATTCCTTCCTATGATGAAGTTTTGAACAAAAAGGAGACAGTCACTCCAGGTTTTGATGATTTTTCAAGATCAGTTTCTCACCCTGAACCTCAAATTTTCCGGGGACCCGAATctcctataaaatatcgaaacAACCTAATGTTTGAGAGCCAACTGCGAGTGGAGACTAATTATTGGCAGACTAATCATGAGAgtgttttaaattcagaaagaGACCAAAGAAGTGTCGATTGTTCGGAAAAAGCGAGGTCAAATTCAATCAAGAAACACATGATGTACACACCGGAAGTTCTTGATGTGACCAATGTTTCTTATTTATCGAAAAGACCTTGTGATCTTGGTCCTGAGAATGTTGATGCCCTGGAGCTGCGAATCTCGAATGATCCTGGTAGATTTGAGTCTACAAATAGTCGCAAATCTAGGGAAGATACATCTCGACTACCAAATCTTGGAGTTGTTTCTGATGGAAGTTACCAGATAAGAGAAAGGTCGGAGGAGAGATTTTTTGAACAGAGGGTTCCGCCATTGTATTATGCGACAATTGGTACATCGAGCAGTATAGAAAGACTTGATTATTCGCAAACTGGTGAAGATTTGACCTGTGGAGAAAGTTGCTGTAGGTGGCGACCTCCAAGAAGACATGTGGCCAATCAGGTGACAGCATCACCTTGGAGGCAACTTGCAAGGCCTCATCATTCGCCAAAAATTCAACCCATCGTCATGCAAAGTCCTTTAGACACACCTGTGTCATTGGAAGCCCAAGCAACAACCTCACCTTCTTGCAGTCCATCCGACTCTCCAGAATCATACGTTGCAGTGACTAATCGCCTAACTCAACAATTTCCTACATCTCCTGAAAAAAGATCACCATGTGAAGAAGAATCGCTCACAAAATCGAGTCAAGATAGCCggcaagaattttatttaactccCATTCCGGGACCAATTGCTCAACCTGTCATACTTCCCTCAATGCCTAGAACAATTCAACCTTTTTATCCAAATTCAACACCTCTACCATCAACAAGACCGTTTTATGAAACTGAAACAACCCAAAGTGCCACGAATCACGTAACTCCAATTCGTCCAAgtccaaaaaaagtttacttCGGACATAACAACTGCCAAAAACCGGAGATCTCGCATCCGATCAGTAGACTTTGCGATTCGATTCGACCAAAAGAATCTGTGGAACGCATTTCTGCGGAACAATCAATGGAGACGAAAATTGAAGTCGAAAGTCAGTGCAGTGATAAAATTGCCACCAGTTTATCCGTCCTTAGCGATAGCAACAATAATGAAGCGAGTGGGGATCAATTTCTTCGAACTAGAAACAATTCCACTTCTGAGGATCATCGATGCGATCAATGTGGGAAGACTTTCGTCACCAGAGCATCATTAAAGGTCCACAGCAGGACGCACTCGGGTGAAAAGCCGTTTCGTTGTGCGGACTGCGGGAAGCAGTTCTCCCAGCTTCGGAACTACAAGTACCATCGAAGCGTGCACGAAGGCACCAGAGAGTTTGCTGCTACTTGTCCGGAATGCGGCAAATATTTCAACGATCGAGGATACTTGAGCTCCCACATGAAGATCCATCGAAATCGGAAGGAATATGCATGTGGAGAATGCGGTAAGAGCTTCAATCAACGGGTAGCCTACAATATGCATGTGCGAATTCACACAGGTGTCAAACCTCATCAATGTGACCAGTGTGGCAAAGCATTTTCGCGAAAAATGTTGCTGAAACAGCATCTTAGGACCCACTCTGGAGAGCGACCATACGAATGTCAAGTTTGTCACAAAGCTTTTGCAGATAGATCGAACATGACACTTCACACGAGACTTCATTCTGGCTTGAAACCTTATCAGTGCACACTTTGCACAAAGGCTTTCACGAAAAAACATCATCTGAAAACTCATCTTAATTATCACACTGGTACTAAACCTTACTCGTGTCCAAATTGTGGCCTCAGGTTTTCTCAGAGCAGCAACATGAGAACACATTACAAAAAATGCGCGATCAACAATCCTAATGGAGTCAGAAACAACCAGAATGAGTTGGTTGTTTCTTCAAGCACTCTTGAAGCAGAGAATCAGAAGGTTTTGAgtcaaaatattgtcaaatctCCTACTGCCCTCACGCCTCCGAACTCTGATCAAGAATCTAGTGTATTGACACCGATATCGAGGACTGTAGTGTGTGAAACAAGGAAAACGTAG
Protein Sequence: MMGEVIRVSGRAPDVGDFLREAMLSQRFADVALCCPGGQRFLAHRLVLSAASPYLQEVLLAHSKGVEYCEPITVILAEVEGPELAAILGFVYTGSATVPRLRLNAFLRAAEALHIRLPPLPVVMKNSVADYKPEDVKDVKISTNYLECEQYPSNERWFRPRKVIPSYDEVLNKKETVTPGFDDFSRSVSHPEPQIFRGPESPIKYRNNLMFESQLRVETNYWQTNHESVLNSERDQRSVDCSEKARSNSIKKHMMYTPEVLDVTNVSYLSKRPCDLGPENVDALELRISNDPGRFESTNSRKSREDTSRLPNLGVVSDGSYQIRERSEERFFEQRVPPLYYATIGTSSSIERLDYSQTGEDLTCGESCCRWRPPRRHVANQVTASPWRQLARPHHSPKIQPIVMQSPLDTPVSLEAQATTSPSCSPSDSPESYVAVTNRLTQQFPTSPEKRSPCEEESLTKSSQDSRQEFYLTPIPGPIAQPVILPSMPRTIQPFYPNSTPLPSTRPFYETETTQSATNHVTPIRPSPKKVYFGHNNCQKPEISHPISRLCDSIRPKESVERISAEQSMETKIEVESQCSDKIATSLSVLSDSNNNEASGDQFLRTRNNSTSEDHRCDQCGKTFVTRASLKVHSRTHSGEKPFRCADCGKQFSQLRNYKYHRSVHEGTREFAATCPECGKYFNDRGYLSSHMKIHRNRKEYACGECGKSFNQRVAYNMHVRIHTGVKPHQCDQCGKAFSRKMLLKQHLRTHSGERPYECQVCHKAFADRSNMTLHTRLHSGLKPYQCTLCTKAFTKKHHLKTHLNYHTGTKPYSCPNCGLRFSQSSNMRTHYKKCAINNPNGVRNNQNELVVSSSTLEAENQKVLSQNIVKSPTALTPPNSDQESSVLTPISRTVVCETRKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00200951;
90% Identity: iTF_01389610;
80% Identity: iTF_01392927;