Basic Information

Insect: Synergus laeviventris
Gene Symbol: salm
Assembly: GCA_032275145.1
Location: JAUESI010000038.1:9818565-9828518[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.6e-06 0.00063 20.8 0.9 1 23 385 407 385 407 0.98

2 9 9.1e-06 0.0012 19.8 2.1 1 23 413 435 413 435 0.98

3 9 0.048 6.5 8.1 3.1 2 23 793 814 793 814 0.97

4 9 4e-08 5.4e-06 27.3 0.6 1 23 820 842 820 842 0.97

5 9 5.5e-05 0.0075 17.4 2.6 1 23 852 874 852 874 0.98

6 9 0.0019 0.26 12.5 1.9 2 23 1173 1194 1172 1194 0.97

7 9 0.01 1.4 10.2 1.1 1 15 1200 1214 1200 1214 0.94

8 9 9.4e-07 0.00013 23.0 2.1 3 23 1416 1436 1414 1436 0.96

9 9 1.8e-07 2.5e-05 25.2 0.9 1 23 1442 1464 1442 1464 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.6e-06	0.00063	20.8	0.9	1	23	385	407	385	407	0.98
2	9	9.1e-06	0.0012	19.8	2.1	1	23	413	435	413	435	0.98
3	9	0.048	6.5	8.1	3.1	2	23	793	814	793	814	0.97
4	9	4e-08	5.4e-06	27.3	0.6	1	23	820	842	820	842	0.97
5	9	5.5e-05	0.0075	17.4	2.6	1	23	852	874	852	874	0.98
6	9	0.0019	0.26	12.5	1.9	2	23	1173	1194	1172	1194	0.97
7	9	0.01	1.4	10.2	1.1	1	15	1200	1214	1200	1214	0.94
8	9	9.4e-07	0.00013	23.0	2.1	3	23	1416	1436	1414	1436	0.96
9	9	1.8e-07	2.5e-05	25.2	0.9	1	23	1442	1464	1442	1464	0.98

Sequence Information

Coding Sequence: ATGCAACTTATGCGATGGAGCATAACGAGGCGCCTCGACAGCCGAGGAATGAGCCAACGTCGCGACGCTAAGACATGTCAGACTGATCCAGCTGGACCCCGCCTATCTTATTCACGGTCTTCCGgagAAGAAAATGACTCAGCTTCAGACGACGAGGAAAGTGGGGGAGGAGCGATCGGCGAAGAGGCCGTTGATCTTACAGCAACACGTTCCCATCACGGAGATGAGGACGAAAAAGATCAGGAAGAACTACCAATGGAGGAAGACGAGGATGAAGGAGTTGATGAGCAGGAGGAGCAGGACGAAGACGAAGAGGGTTCGTGCAAGCAAATGCGCCACCGTCAAGATGCGGAAAACAATAATAGCTTCGTGGAGGGAGGTACAGCTGCTGGAGTCTTCCCTCCCGCCGGCACTAGTCACGTTACTCTTGGAGCCCTTGAAAACACAAAAGTTGCAGTCGCCCAATTCGCAGCCTCGGCCCTGGCGGGTAGCGCAGACAGCGAGGCGGCCATGCAAGATTATGCCTTTTTGCAAAGCACCCTGTACACCCTTCAGCACCAACAGGTTTTCCAACTCCAGCTTATCAGTCAACTACGACAACAGTTATCAGGGTCGCAACCGGGAGTGGCACCGGCGATAGGAGACTCAGCCACCTCAGACAACAAAGAACCTTCACCATCCCCGATCACAAATCCAAAATCCCTCCCTATTCTCACTTCACCTCCACCATCCCGACCACCCAGTCATCAGCAACCATCCCCATCGCCTCTCACCCCCAACTTGCCCCAGGATCGACCAGCACCAGCAAGTAGTGCTTCTCCCGTCGGTATACCTCTTCCATCATCAACCACAACAACGCCAACCACAACATCTAGCAACATGGTAGCTATGAGTCATCAAATGCCACCTCTCTGCTCTATAAGTTCATCCCTCGCATCTACGATCATCACCAACAACGATCCACTACCCCTTCATGAACCGAACACCTTGGAGATGCTTCAAAAGCGTGCACAGGAGGTGCTGGATAATGCAAGTCAAGGTCTGCTGGCCAACAATCTGGCCGATGAGCTCGCCTTCAGGGGTGGCAAAGGCTCAAGGTTATCTCCCTACGACTCGAAAACCGGTGGCAGCCGGGGCGAACCCTTCTTCAAACATCGATGTCGCTACTGCGGCAAGGTCTTTGGCAGCGACTCCGCCCTCCAGATCCACATACGGTCCCACACAGGTGAGCGTCCCTTTAAGTGCAACGTCTGCGGGAGCCGATTCACCACCAAAGGAAACTTGAAGGTCCACTTCCAAAGGCACACGGCCAAGTTTCCGCATATTAAGATGAATCCCAATCCCGTTCCTGAACACCTCGATAAGTATCATCCTCCACTCCTCCAACAGTTAGCAGCATCCGGGCAGAGACCCTTACCGTCTCCTCCACCTCCACCACACCCGCATCACCCCCCTTTTCATCCCGCCGCAGGACACGGTTTTCTCCCCCCTCAACCTCCCTTACCTCTTAGTCTAGCCATGCCCAGTATGTCGCCCCTCTATCGACCTCCTCTTGTCAATCACCGAGATGATCAAGACGTCCCTGAGAACCTTAGCAAGCCTGTCACAACGGCATCTACGACTTCTCCGCCATCACCTAACACCCACTCGAGTTCTCATCATTCCTTTCTTGATCATCAACAACAAAAGCAGGAGCCGAAGGAAGAGATAAAAGTCGAGCAGTCGACGCAAGAGCCATTTCAGCAACAACCGTCCAATCAGGAGAGTGCGGAACAAATTACGCCTAAGCGAGAGCCAGAGGACACTGACGAACATCCAGAAGACGAAAGCGAGGAATTCGACGAGGCGACTAGGAAATTCATGAATTCCTCACCATCCTCTGCGAATCCTCCTTCTCACCATCAACAATACGAGGATTGTAGTATGGATAGTAAAATTAGTGGACGTCTAGAAGGAGACGTCGAAATGGAAGCTGACGAGGACATGGAGGAACAGCCTGAAAATCTCTCAAGTAGAGGACCCGGCATTCGCCTATCACAACAACCACTTCCATACCCTGGAGCTTCACCAGCAAGTAGTAGCGGCAGCAGTGGTAGTCTTCACACATCCTTTTCTGGAATTATATTCCCTGGACCCCCACCTCATCATCAGTTACCTCATCATCCATCCTCAACAACTGGAACGACTCCCACAGGATCCGTCAACGATATGATCGTCGATCCTGCAAGAGATCCAGCTATATACTCGAATCTTTTACCGAGACCTGGTAGCAACGACAATTCCTGGGAGAGTTTAATAGAAATCACAAAATCGTCTGAGACGATGAAATTGCAACAATTAGTAGACAATATCGAGCACAAGTTGACGGATCCGAACGAATGTGCTATTTGTCATCGAGTGCTATCCTGTAAAAGCGCTCTCCAAATGCATTATAGAACGCACACGGGAGAACGACCTTTTAAATGCAAGATTTGCGGAAGGGCCTTCACCACGAAAGGAAATCTCAAGACCCACATGGGAGTCCATCGAGCGAAACCACCTCTGCGAGTCTTGCATCAGTGTCCTGTTTGTCACAAGAAGTTTACCAATGCTCTAGTTCTTCAACAGCACATACGATTGCACACGGGAGAGCCTACGGATCTCACACCAGAGCAAATTCAAGCTGCAGAAGTGAATGAGTACCCAGGTTACCCTCACAATCCTCTAGCCTCCTTTCTTCCACAGGGATTCCCACCTCTTCACTCTGGTGGTCCCGGTTTCCCTCTAGCCTTTCCACCATCTCGACTTTCATTAGAAAGACAATCCTTGGAGAGTGAAAGTGATATAACAGAACGCCAGAGGCAACACCATCAACATTTGCAACAACAGCAACAAAGATATCTAGAGGAACATGGGGAAGATATGGAGGACCAAGATGAAGAAGAGGATGATCGGAGAGATGAAGACGACAGGTGTGACGAAGCTCAGGAAAGGCGAATGGttgaggaagaagaagaaccAGAACAAGAACCTGAAGAACCTGAGCCAAAGGAAATACCTATCATTCCCTCCTTCTCGACTTCCTTAGCGGCGCTTGAAAATCAAGTCCGGACGATAACGACGATGGCTCAGGGACATCTAAACTCTGTCAGATCGCCTCCTCCTATTCATCGGTACAATGGCAGCGAGAAAAGTAACAGTCCACCTGGTGCTGGGGCACCTTTGGACTTGACACCAAGAGCTTGTTCAACACCAGCATCCGTAGCTTCCGCTTCGACACCACCGCCTCAAACCACACCACACCACCCCAATCCATTCGGAATGTTTGCAGGGCTTTTACAGGCGGTGTCTTCATCGCCATCTGTGAATACTATGGGAACGAGCATAAATAGCATTTCGCCGATGAACGCAGTCAGTCCTGGCAGTGGTGGCGGTGGACCTTTAGCCTCATTAACAACTTCAGCCGTTTTGGCAGCGACCTCGACTTACAATCCGCTTGGCCTAGCTGTCGGAGGCCCAGCAGTACGTGGCAACACTACGTGTAATATCTGCTACAAGACATTCGCGTGTAACTCTGCATTGGAAATTCACTACCGGAGCCACACGAAGGAACGACCCTTCAAATGCACCATCTGCGATCGAGGATTTTCAACTAAGAGTGACGGCACAGTGGTAGAATCGTGCAAATGTGCTGAACGGGGAAACGGATTATCCGCAAGAAGTTCGACTACCGTTAGATCAGATCTTCCATACCAGTCGTTATCAGCTCGACCACCATCGATAGTATCGACGGAGTCTCAGGAGAAGCCAAAACGCAGGAGACGGCGGCCCGAGGATCGTAAGAATCGGGGGCGGACTGGGACTGGAGGGGGGCGGGGACTGACGTCTACCTATGCTGCAATCTATGGGGACGTACGCCTGCCCCCACTGATGCCCCCCGCCCTCGGACTTCTAACCTCGGACCCCGTATTCCTGGGCAACATGAAGCAACACATGCTGACCCACAAGATCCGGGACATGCCTCCTCATCTCTTCAGCGACTCCAAACCACCAACTCAACAGCACCAGCAACAGACCCCAGATCATGAAACTTCCAGGAGTCCAATGTGCACTGATGAGTCAAGTTTACCTCCACCACCTCCACCGCCTCCACCTCCACCTCCGATGCCACCAACACCAATGGAGTCTGCAATCCAGAAGAGGTCTCTAACGGAAAGCGAAATTGGAGCGCCAAAAAGGCCGCACAGCATGTCCAGCAAACACTTGTGCCAGGTTTGCAATAAGAATTTCTCCTCGTCCTCGGCGCTCCAGATCCACATGAGAACACATACTGGTGACAAACCATTCCGGTGCACCGTCTGCCAGAAGGCCTTCACTACCAAGGGCAATCTCAAGGTTCATATGGGCACACATATGTGGACCAACGGAACCTCCCGACGAGGACGTCGAATGTCTCTGGATCTTCCTCCTCTACCCATCACGCCCAAGGACTCAGAATTTCTCCAACGACGGCCGGATCTCTTCTATCCTTACCTACCTACGCCATTCCTTAACGGAGTTCAGCAGAAATTGAACGAGATCTCGGTGATTCAAGGCAGCAATGGATTGCCAGCCCATCCAGTAAATGCAAGCAAATACGCTGGAATCTTTGGATCAGTGTACGGAGGTGGTTTTCCTATGGAAAAGCAACCCATGACACCTACCAACGGTCCCATGGGCGACACCAAGTCATCACTAGCCTCCAGCTCCATGCTATTCCAAACTCCATCTCCATCTCATTCCCCGGGGGCACCCTCCTCCAACACCGGAAATCAAAATTCAGCGAGCATGCCTGCTTGGAGTGGCGAACCTTTGCAACATCACTACGAAAGAGATGCACCTTCAAGAACCGAGAGCAACGCGACTCCACCATCAGCGCGATTGCCACCTCCACCTGCACCTCGAGGGGAAGGTTTAGCTGCGTGA
Protein Sequence: MQLMRWSITRRLDSRGMSQRRDAKTCQTDPAGPRLSYSRSSGEENDSASDDEESGGGAIGEEAVDLTATRSHHGDEDEKDQEELPMEEDEDEGVDEQEEQDEDEEGSCKQMRHRQDAENNNSFVEGGTAAGVFPPAGTSHVTLGALENTKVAVAQFAASALAGSADSEAAMQDYAFLQSTLYTLQHQQVFQLQLISQLRQQLSGSQPGVAPAIGDSATSDNKEPSPSPITNPKSLPILTSPPPSRPPSHQQPSPSPLTPNLPQDRPAPASSASPVGIPLPSSTTTTPTTTSSNMVAMSHQMPPLCSISSSLASTIITNNDPLPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGGKGSRLSPYDSKTGGSRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHIKMNPNPVPEHLDKYHPPLLQQLAASGQRPLPSPPPPPHPHHPPFHPAAGHGFLPPQPPLPLSLAMPSMSPLYRPPLVNHRDDQDVPENLSKPVTTASTTSPPSPNTHSSSHHSFLDHQQQKQEPKEEIKVEQSTQEPFQQQPSNQESAEQITPKREPEDTDEHPEDESEEFDEATRKFMNSSPSSANPPSHHQQYEDCSMDSKISGRLEGDVEMEADEDMEEQPENLSSRGPGIRLSQQPLPYPGASPASSSGSSGSLHTSFSGIIFPGPPPHHQLPHHPSSTTGTTPTGSVNDMIVDPARDPAIYSNLLPRPGSNDNSWESLIEITKSSETMKLQQLVDNIEHKLTDPNECAICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVNEYPGYPHNPLASFLPQGFPPLHSGGPGFPLAFPPSRLSLERQSLESESDITERQRQHHQHLQQQQQRYLEEHGEDMEDQDEEEDDRRDEDDRCDEAQERRMVEEEEEPEQEPEEPEPKEIPIIPSFSTSLAALENQVRTITTMAQGHLNSVRSPPPIHRYNGSEKSNSPPGAGAPLDLTPRACSTPASVASASTPPPQTTPHHPNPFGMFAGLLQAVSSSPSVNTMGTSINSISPMNAVSPGSGGGGPLASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKSDGTVVESCKCAERGNGLSARSSTTVRSDLPYQSLSARPPSIVSTESQEKPKRRRRRPEDRKNRGRTGTGGGRGLTSTYAAIYGDVRLPPLMPPALGLLTSDPVFLGNMKQHMLTHKIRDMPPHLFSDSKPPTQQHQQQTPDHETSRSPMCTDESSLPPPPPPPPPPPPMPPTPMESAIQKRSLTESEIGAPKRPHSMSSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGTSRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPTPFLNGVQQKLNEISVIQGSNGLPAHPVNASKYAGIFGSVYGGGFPMEKQPMTPTNGPMGDTKSSLASSSMLFQTPSPSHSPGAPSSNTGNQNSASMPAWSGEPLQHHYERDAPSRTESNATPPSARLPPPPAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00677000;
90% Identity: iTF_01392235;
80% Identity: -