Basic Information

Insect: Synergus laeviventris
Gene Symbol: -
Assembly: GCA_032275145.1
Location: JAUESI010000029.1:15220815-15225423[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.025 3.3 9.1 1.8 1 23 434 456 434 456 0.97

2 18 0.074 10 7.5 1.6 2 23 508 529 507 529 0.94

3 18 4.4e-06 0.0006 20.8 1.2 1 23 585 607 585 607 0.98

4 18 0.14 19 6.6 0.4 2 23 611 632 610 632 0.95

5 18 3.2e-06 0.00044 21.3 0.7 3 23 682 702 681 702 0.95

6 18 0.00059 0.08 14.2 0.8 1 21 708 728 708 732 0.92

7 18 0.00049 0.066 14.4 3.5 2 23 800 821 799 821 0.95

8 18 4e-05 0.0054 17.8 3.8 1 23 873 895 873 895 0.97

9 18 0.00053 0.073 14.3 1.1 1 20 900 919 900 921 0.94

10 18 0.047 6.3 8.2 0.3 2 23 932 953 932 953 0.97

11 18 2.8e-05 0.0039 18.3 0.6 2 23 992 1013 991 1013 0.97

12 18 2.6e-05 0.0035 18.4 1.6 1 23 1018 1040 1018 1040 0.95

13 18 0.00014 0.02 16.1 2.9 1 23 1046 1068 1046 1068 0.98

14 18 4.6e-06 0.00062 20.8 0.4 1 23 1084 1106 1084 1106 0.95

15 18 3.7e-07 5.1e-05 24.2 0.6 1 23 1112 1134 1112 1134 0.99

16 18 0.00018 0.025 15.7 0.2 1 23 1140 1162 1140 1162 0.97

17 18 0.00076 0.1 13.8 4.2 1 23 1168 1190 1168 1190 0.96

18 18 0.011 1.4 10.2 0.4 1 20 1196 1215 1196 1217 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.025	3.3	9.1	1.8	1	23	434	456	434	456	0.97
2	18	0.074	10	7.5	1.6	2	23	508	529	507	529	0.94
3	18	4.4e-06	0.0006	20.8	1.2	1	23	585	607	585	607	0.98
4	18	0.14	19	6.6	0.4	2	23	611	632	610	632	0.95
5	18	3.2e-06	0.00044	21.3	0.7	3	23	682	702	681	702	0.95
6	18	0.00059	0.08	14.2	0.8	1	21	708	728	708	732	0.92
7	18	0.00049	0.066	14.4	3.5	2	23	800	821	799	821	0.95
8	18	4e-05	0.0054	17.8	3.8	1	23	873	895	873	895	0.97
9	18	0.00053	0.073	14.3	1.1	1	20	900	919	900	921	0.94
10	18	0.047	6.3	8.2	0.3	2	23	932	953	932	953	0.97
11	18	2.8e-05	0.0039	18.3	0.6	2	23	992	1013	991	1013	0.97
12	18	2.6e-05	0.0035	18.4	1.6	1	23	1018	1040	1018	1040	0.95
13	18	0.00014	0.02	16.1	2.9	1	23	1046	1068	1046	1068	0.98
14	18	4.6e-06	0.00062	20.8	0.4	1	23	1084	1106	1084	1106	0.95
15	18	3.7e-07	5.1e-05	24.2	0.6	1	23	1112	1134	1112	1134	0.99
16	18	0.00018	0.025	15.7	0.2	1	23	1140	1162	1140	1162	0.97
17	18	0.00076	0.1	13.8	4.2	1	23	1168	1190	1168	1190	0.96
18	18	0.011	1.4	10.2	0.4	1	20	1196	1215	1196	1217	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTAGAGATAAATACGTCGGAGCCACCGCAAAATGAGGAGGGAATTGTATCTGCGATGGAAATATGTCGTGTTTGCCTTCTTGGAAACGTTGTGATGAGGGACCTCTTCCACGATACCGAAGTCAACTCTTTATCTGCTAAAGCCATGAGCTTCGCCAGCGTTAAGaTGATGCCAGGCGACGGTCTGCCAGGACAGGTATGTTGCATTTGTGCAGACAAACTGGAATCAGCATACGATTTCAAGTTGCAAGTTGAACAAGCTGACAGTGTTCTCAGAGAAAAGTTTGATACACTTAACATTAAAGAAGAACTATTTTTCAACGATGTCGAAGTTCATTTGGAAGGAGAGAGAACTCGCACGAGACGTGAAATAAATGACAATGGTGAATACGTGGAGACAACTGAATCTTTGCACGATGTTGGCAGAGACACACTTTTGAAGGATCATCTCGCTCTTTTACAAGTTCAAAAACTAGCAGAACAAGAAAGCATGCTGCAACAAgGTGTGGAACACTTACAAGAACATCTCCAAGAAGAATTGCAAGAGGAACACCTCCACGAGGAACATTTGCAAGATGAGCACTTACAGCAGGAACAATTACAGGAGGAAAATTTGCACGAGGAACACCTTCATGAAGAACACTTGCAAGAAGAGCACCTACAGGAGGATAATTTACACGAAGAACATCTGCAAGAGGAACAAATGCAAGAAGAGCATTTGCAGGAAGAAGATTTACAAGATGAGCATTTACAAGGAGAAGAAATAGAAGAGGATCTACAAGAAAACGATATTGTGAACATAAACAAGCAGTCTAATCAAGAGCTCTTGCAGTTAGAACAGATTTCGCAATCCGTGCACCACTTCGCCGATCAGAGCGACGTCAAAGATGAAAGACTCCATGAAACAGAATCTGCAAATATGCCTCAGCAAACTTACATTGATCAACAGGATTGCACTCAGATGAGTGACGATGATTTCAACAACGACGAACCCTTCGCAGTTACTCAAGAGACTATGGAATATTCTTCGTCCTCAGTTAAAGAAAGACAAACCGAGCAAGAGCCAGTCCAAGGCCAATTTCAGCAATCTACAGAAGACACGTCCATTGAGCAAATAAATCTCAGCTTGGAAGAAGAATCTCCTCAGAGTGAAACACGCAGAAGCAAACGCAAAATTGCTCGTCGCTCTACCGCTTCTGAGCACAACTCCGACGAAgagaattatttcgaaaatctaAACCTTAGTTCACGTTTGAAGAAAACTCAGATGGATAAATCAGAGAAAGTCTTCTTTATGTGCTACCTTTGTGACAAGGAATTTCTCTCAAAAGGAGTTTTGAAAGAACATATGCACTCCCACGAGGAAGTAAGAAGGACCCTTTccttgaaaaagatagaagacAAGCCTCAAAAGACAGCAGCACCACAGAAACTACCTTCTACACCGAAAACCTCTACTCCTCAGAAATCTGCTTATCCTGTGAAAATGCCACCATCAGGAAAGAAACTGAATAAATGTCCTCATTGTGGAAAAGAGTATCTTTACATAATCTCATATAACAAGCATTTGAAGCAACATGAAAAAGAAACCGATGGCCTGAAGAGTGAGTCAATGCCACTGGAAGTTAACTTCCGCGAGGACGAAGATTCTATTTACTTTCCTGGGTATGCAAACACTCCTAGTACCGATCACGCTAACACTGGCAATTATTCAGAGCCGGATGAACAAGGGAAGGAAGAAGTATATCAATGCAACAAATGCCCAGAGACGTTTAATACAAAACGAGCACTTCGAAAGCATGCTATTAAACACACAAGTTTGAAGTGTTCCGTTTGTGAGGAGCAATTCGACTCTATGGAAAAGATGAAGGAGCACCGAGCTCAACACGTAACTGAAGGGGTTTTAACGGAAGAAGATTTGAATAAGGACCTTGAGAACTTAAAAGATCTTTTACAAGATGAGGAAGATGAACAAACAGCTGATAAGAAGTCTCTCTCTCGAAATTCCGAGACTAACTCAGGCAATaagaatatttgtaaaatttgtggACAAGAGTTTTCGAGAAAGGATCAGTTACAAAAACACTTGGACCAGCACGGAAAAGTAAAGTCCTTCAAGTGCACTCAGTGCAATAAAACCTTCGGCAATGAACTCACATTACGTAATCATTTGATAGCAACTAATCACAAAACCATTTTGCATGGTCAAGAGTATGACCCGAACAAGAGGATTAAACGAGTCGCGGCAAAAGCTGCCGAGAAGATTATCGACAAAATCAAAATCGAAGATGAAAGTGATTACGAGGAGGATAATACAAGTAAAAAAGACAGCAACTATCGAGAAGAATCGAAAACTCTAGGTAAAAGGGCTTACAATAAAAAGATTCTGGAATGCGCGacctgtaataaaaaatgcagtTCTAAGCAATCATTGACAAAACACATGGAACAACACGTCAAGGATGAAAAGggagataaagaaaaaatagataagATCAAATTAGAAAGGTCAATGAAACAAGATATTGACAGACCACTAGATGACGATGATGACGATGATGATCTCGATGATGATTTCGAAAGTGGTCTGGATTGGCCGATGGACACTCACGAGTGCCCCACTTGTAAAAAGAGATACAGTACCAAGAAATCTTTATTAAGGCATCAACTTTTACATGAGGAGCCGAACTTTGAGTGCGATATTTGCAATGTCAAGTTCTACCGCAAAGATAAACTTAAATCCCATTACGACAAatgttcagaaaaaaatcccgATCAGGTGCGAAAATGCAACATCTGCGGGGATAGTTTCGAGAATAATGAAATTCTCCGTGAGCACAGAGCAAAGCACGTGACTGAAGGTATTTTAACGGAGGAGGATTTGAGGGAAATCGAACCTAGGCCCGAGGAAAGAAAATCAGGAGAGAAAGTAGCGAGGAAGAGAAGAACAGATATTGTTGGTCTCGAGTGTACAGAATGCAATAAACAATATACTTCTAGAAAGGGACTTTTGCGCCATATCCAAGTTCATGAAGGTAAGAAATACCTCTGCGATATCTGTCCAAAGAAGTTTTACAGAAGGGAACATCTAAAGATTCATGTGGCGAAACACAACATGATCAAGCCTTATAAATGCACGCGTTGTACAAAACGTTTTATTAAAGAAGAACAACTAACAAACCACCTTTCGAAACACGACAGGacctttaaaaagaataaggaAACGGACAGTTCAAAGAGGTTCCTCTGCGAGATCTGCTCGAAGAGCTTTACTCAATCAACTACCTTGATTGCGCATCTCAGAGCACACAACGGAATAAAGCCTTATGTTTGCGAAGTTTGCTCGAGACCTTTTACGACAAATGCTTATCTCAAGATGCATATGAGAACTCACACGCAGGAGCGACCTTATATTTGTCAATTCTGTTCGAGGGCTTTCGCCAGAGCTGATACATTGGCTAATCATCTGACTTCTCATACTGGAGAGGCCAAGTATCACTGCAAGTTCTGTCCGAAGAACTTTAGAAGATTGAAGTCGCTGAAGGAACACGTTTTTATCCACACGGGACAGAGACCTTATGCTTGTCCGACTTGTGATCGCAGGTTCAATAATAATGGAAGTAGATACGCACACAGCAAAAGGTGCAAACAAAACATGCTGCAGAATCAGAACCGCGTTCAAGTTGTAGCACCAGAAATGCAACAGAGATTACAGCAAACCCTCGTCCAGTCGCCTATGATTAAATCGCAGAGTATTAAGACGATAACGATTGCTAGACAGGACCCCCTAACAGCTCAGCAGGTTCTCCAACATCAGGAAATTTTGATGCCACTCATTTTGCCCCTGACAGTTACTCTCGCCGATGTGGGAGAGGAAGTTATTTTACCGGAAGGTACAAAGATCTTCACGACGTCTTAA
Protein Sequence: MDAVEINTSEPPQNEEGIVSAMEICRVCLLGNVVMRDLFHDTEVNSLSAKAMSFASVKMMPGDGLPGQVCCICADKLESAYDFKLQVEQADSVLREKFDTLNIKEELFFNDVEVHLEGERTRTRREINDNGEYVETTESLHDVGRDTLLKDHLALLQVQKLAEQESMLQQGVEHLQEHLQEELQEEHLHEEHLQDEHLQQEQLQEENLHEEHLHEEHLQEEHLQEDNLHEEHLQEEQMQEEHLQEEDLQDEHLQGEEIEEDLQENDIVNINKQSNQELLQLEQISQSVHHFADQSDVKDERLHETESANMPQQTYIDQQDCTQMSDDDFNNDEPFAVTQETMEYSSSSVKERQTEQEPVQGQFQQSTEDTSIEQINLSLEEESPQSETRRSKRKIARRSTASEHNSDEENYFENLNLSSRLKKTQMDKSEKVFFMCYLCDKEFLSKGVLKEHMHSHEEVRRTLSLKKIEDKPQKTAAPQKLPSTPKTSTPQKSAYPVKMPPSGKKLNKCPHCGKEYLYIISYNKHLKQHEKETDGLKSESMPLEVNFREDEDSIYFPGYANTPSTDHANTGNYSEPDEQGKEEVYQCNKCPETFNTKRALRKHAIKHTSLKCSVCEEQFDSMEKMKEHRAQHVTEGVLTEEDLNKDLENLKDLLQDEEDEQTADKKSLSRNSETNSGNKNICKICGQEFSRKDQLQKHLDQHGKVKSFKCTQCNKTFGNELTLRNHLIATNHKTILHGQEYDPNKRIKRVAAKAAEKIIDKIKIEDESDYEEDNTSKKDSNYREESKTLGKRAYNKKILECATCNKKCSSKQSLTKHMEQHVKDEKGDKEKIDKIKLERSMKQDIDRPLDDDDDDDDLDDDFESGLDWPMDTHECPTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKSHYDKCSEKNPDQVRKCNICGDSFENNEILREHRAKHVTEGILTEEDLREIEPRPEERKSGEKVARKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQFCSRAFARADTLANHLTSHTGEAKYHCKFCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNMLQNQNRVQVVAPEMQQRLQQTLVQSPMIKSQSIKTITIARQDPLTAQQVLQHQEILMPLILPLTVTLADVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00980354;
90% Identity: iTF_01393725;
80% Identity: -