Slae013426.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Synergus laeviventris
Gene Symbol
FLT1
Assembly
GCA_032275145.1
Location
JAUESI010000034.1:4236689-4241939[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.7e-09 1.4e-05 25.5 0.0 2 36 17 51 16 55 0.91

Sequence Information

Coding Sequence
ATGTCTAAAACCGTGAAAAAGCAATTGACGAGAGAAACAACTTACACCGAAGCTGATGTAGAGAAAGCTCtgaaggaaattgaaaatggcATGTCAATACGAAATGCGAGTAAATTGTTCCAAATTCCCAGAACGACCCTTCTCTACAAACACACAGGAAAGTCTCCGATTTCAGCCAAAAAGGGTCCAGCTCTCGTTCTaacagaaaaagaagaaactcAGCTTGTCCTCTGGTTCGTAGAAGCCAGTGAAAAAGGATTTGCCGTAACGAAACAACAACTCTTAGACAGTGTACAAATACTAGTAAACAAAATCGTTAAGAGGAAAACACCATTTTCTGATGGTCGACCTGGTCGTCACTGGTATGAGAAATACGTTCGTCGACACCCGAAACTGGCACAAAGGATTGAAGAAAACTCGACAGAAAGAAGAGCACCTTTAActgaagataaaataaaagactGGTTCCTTGGAGTCAAGAACCTTCTGCACAACAAAGAACTTTTGGATATCCACCCATCTAGAATATTCACCTGTGACGAAGGTGCCTTCTTTTTAAGCCCTGAGAGTGACAAAGTCATTATTCAAAGAGGCTCAAAGACAGTTTATAATTTAGGAAAAAGCAGTGACAAAGAATGTCTCACAAGCATGTTCACTGCCAATGCTTTAGGAATTTTAGCACCTCCGATGGTCATGTTTCGATACCAAAGGACCCCTTACAGTATTATTACCAGTATTCCTGATAATTGGACTTACGGAAATTCAGAAAATGGATGGATGACTGGTAGAACTTTTTATGACTATATAACTGGTGTCTTTTACCCTTGGcttctagaaaataaattcgaattccCAGTAGTTCTCTTCCTAGACAAACATTCCTCTAATCTCACAATGCCTTTAAGTAATTTCTGTGCagaaaatagaatagaattaaTTCCTCTGCATCCGAATGCTACACACATTATTCAGCCTATGGATGTGGCTTTTTTCAGACCAATGAAAGCAGTTTGGAAGGATATCATTCAACAGTGGAATGTAGATAATTTTGGAAAGAAGTTTAGGAAAGAGGATTTTGCTGTTGCTTTAAAACTGACAGTGGATTGTGTATATGATGGCGAAGGTTTTAGAAATGGTTTCATGAGTTGTGGATTGTGTCCTTTTTCTCCAGAGGCAATAAATTACTCATTGATTAAAGATTCTGCGGCCTATAAAGAAGTAAGACTCATGAGTAGTAAGTCATCTGTGAATGAGTTTGAAAATGAACATGAGAGGTTTCTGCACTTGTTTGAAATGTATTTGCCGGATGATAAGTTGACTGCATTTAAGGAAAATCAAAGTAATCCACTCTGGATGGGAGACGAAAAGGAcacaaatcttttttatttttggatgaATGCTAGAATACTTGTTGGAATTATCCGGAATTTAACAGTATCCATTTTTCAAGATGACATTGtgccaaaaaaaattgatggattgaaatttaacatATCTTGGCTACCACCTGAAAATGGCAAGCCACCTTCTTCGTATAGTATATTACTCTCATCGCTTTCTagtaaagaaatagaaaatgaaacCTTAAATGAAACATCTTGCCCTAAAGAATCTCTTTATCACACAACACAGgatgaaaaacaaattcaaattctgcTTCCTGAAAGTCGTTTTTTATCTGAAGCTTCTGAACTGAAGATACGATTGAAGTgttcttataaaattcagGTTTTTGCGAATCCTAGATCAAATTCAGCTTTAAAAACACCCACGatAATTTATACTGTACCAGAATGCGTTGGTCTATTGTGCAGTTGCGAAGAATCGCGAAAATTACTTCCTCTACCCAAAATTggaactaattttttatcaaatggggatattttaattgagttGAAATCAAATTCAACTAATTATGTTCACGCTTACATCATTagtttcggATTACCGCTTCTGGTATCAAAAAATGGTCTACCTGTTTACAATAAAACCAAAATAGTAACCCTACCATCAAAAAATTCGTCATTCTTATGGAAAAAGGAAGCAAATGCAAATTATCAGAAATATATAAAGGGATccgtaatatttataaatgcaGAAGACATTCGAGGATGTCAGGGAAATGAAAGAGTTTTGTCAATAGAGTTTCCTAAAAAAGAGTTTATCCTACACGAAAATATAACTcAGGCGCTTGTTGGATTAATTGTTATATGTACTCTTCTTCTTAGTACTTTGGCATTTCTTTGCTTTCGATCTCGAAAAGTATATAATGctattttatttgacaaaaatataCCTCGGAGCAGAAGAATCGACTTGATCTTGCGGAAtcctaatattttatatgtagaACAAGAATTTGAGGATGGAATCAAGAAAGCTGATCATGAGAAATACGAAGTGaattataatcaaataaaaattaaggagGAATTAGGCAGAGGACAATTTGGAAGAGTTTATCTTGCAATTCTGCAAGGAAGAGAGACTTTAGTGGCTGTAAAAATGTCTTTCGCTGATCCAATTGATAAGGGCGAAgctagaaaaaatttattagaggAAATAGAGACTATAAAATCAGCTGGACCACATCCTCATCTTGTTGGTCTCGTTGGATATTGCACCACACCTAAAAATCCAGTTTGTTTAATTCTGGAATACGTTGAAGGAGGAGACTTGCTTTCCTATTTGCAATCtttaagagaaaattcaagtgactttgagatacaaaattctatttctccCAATGGAAGACCCAGCATTACAGAAaCAACTTTTACTTTTGGAAATCAAATacgtacatttttttcaaaagataataattggaatgtatttaattcaattggaAGTTACGTAAACGTTGGAAATAATGAAACACCTAAAGACAAAGAAAAGAGTTATAACACAATTTTAGCGAGAAAACATTTAGTGTGTTTTGCTTTGCAAATTGCTCTTGGGATGGAACACTTGGAAGGAAAGAAGATTATTCATAGAGATCTTGCAGCCCGGAATATCTTGGTTGATtccaatttgaatttaaagATATCAGATTTTGGACTGTCCCGAAATGGAGTGTATGTAATGGGAAATGGAATGGGAGGAGTTCGTCGACTTCCTATTAGATGGATGTCACCGGAAGCTATTCGGGAAAGAgctttttcatcaaaaagtGATGTCTGGTCCTTTGCTGTGGTTTTATGGGAAATAGGAACATTGGGAATATTTCCGTACCTCGAAATGCAGGacgatgaatttttaaaatatatactaagTAATAAAGGGCGTTTACCAAGGCCTGAAAAAATAGATCCtgatatttacaatattatgGACGTATGCTGGGCTCTGAAACCAGAGTATAGGCCGTCTTTTGCAGAACTTGTCTCTTGGTTCCATCTTTTGGGAGAACCTTGCtgtttaaatgataaaaatacgGGAAGAAGCAATCCCTGTTATTCACTTTTATCTTCCTCTGATCGAAATTTATAA
Protein Sequence
MSKTVKKQLTRETTYTEADVEKALKEIENGMSIRNASKLFQIPRTTLLYKHTGKSPISAKKGPALVLTEKEETQLVLWFVEASEKGFAVTKQQLLDSVQILVNKIVKRKTPFSDGRPGRHWYEKYVRRHPKLAQRIEENSTERRAPLTEDKIKDWFLGVKNLLHNKELLDIHPSRIFTCDEGAFFLSPESDKVIIQRGSKTVYNLGKSSDKECLTSMFTANALGILAPPMVMFRYQRTPYSIITSIPDNWTYGNSENGWMTGRTFYDYITGVFYPWLLENKFEFPVVLFLDKHSSNLTMPLSNFCAENRIELIPLHPNATHIIQPMDVAFFRPMKAVWKDIIQQWNVDNFGKKFRKEDFAVALKLTVDCVYDGEGFRNGFMSCGLCPFSPEAINYSLIKDSAAYKEVRLMSSKSSVNEFENEHERFLHLFEMYLPDDKLTAFKENQSNPLWMGDEKDTNLFYFWMNARILVGIIRNLTVSIFQDDIVPKKIDGLKFNISWLPPENGKPPSSYSILLSSLSSKEIENETLNETSCPKESLYHTTQDEKQIQILLPESRFLSEASELKIRLKCSYKIQVFANPRSNSALKTPTIIYTVPECVGLLCSCEESRKLLPLPKIGTNFLSNGDILIELKSNSTNYVHAYIISFGLPLLVSKNGLPVYNKTKIVTLPSKNSSFLWKKEANANYQKYIKGSVIFINAEDIRGCQGNERVLSIEFPKKEFILHENITQALVGLIVICTLLLSTLAFLCFRSRKVYNAILFDKNIPRSRRIDLILRNPNILYVEQEFEDGIKKADHEKYEVNYNQIKIKEELGRGQFGRVYLAILQGRETLVAVKMSFADPIDKGEARKNLLEEIETIKSAGPHPHLVGLVGYCTTPKNPVCLILEYVEGGDLLSYLQSLRENSSDFEIQNSISPNGRPSITETTFTFGNQIRTFFSKDNNWNVFNSIGSYVNVGNNETPKDKEKSYNTILARKHLVCFALQIALGMEHLEGKKIIHRDLAARNILVDSNLNLKISDFGLSRNGVYVMGNGMGGVRRLPIRWMSPEAIRERAFSSKSDVWSFAVVLWEIGTLGIFPYLEMQDDEFLKYILSNKGRLPRPEKIDPDIYNIMDVCWALKPEYRPSFAELVSWFHLLGEPCCLNDKNTGRSNPCYSLLSSSDRNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01389353;
90% Identity
-
80% Identity
-