Slae009178.1
Basic Information
- Insect
- Synergus laeviventris
- Gene Symbol
- GA10450
- Assembly
- GCA_032275145.1
- Location
- JAUESI010000026.1:4344033-4350005[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-10 8.1e-07 29.4 0.1 2 40 120 158 119 163 0.87
Sequence Information
- Coding Sequence
- ATGGAATTTCCAGACTTAAGAAAAATAACTATGGGCGATTTACCAGGATTGATAGAAGGAGCTCACAAAAATATTGGAATGGgttacagttttttaaaacatatagaAAGATCCAAAATGATGTTGTTCGTCATTGACGTGCAAGGATTTCAACTCTCTCCTCGCCATATAAAAAGGAATAGCGTGGAAACTATACTACTTCTCAACAAGGAGATCGAACTCTATAAGCCAGATTTACTTGAAATGCCGGCTATGGTTCTAATCAATAAAATGGACACGCAAGgtaaattattgatttattactCCTTTTTGGTGACTTGTGTGAACCTGATGCCTCCTAAACGAGCGGTGTGGTCAGAAAAGGACCTCATATCAGCTGTCAGAGCAGTAGAAAGAGGAACTTTGAGTTCACATGAAGCTGCAAAAAGATACAAAGTTCCACGAAGAACCATCAGAAATCATCTTAAAAGtggaaatttgacaaaatccCTTGGTCGAAAAGCCCTGCTGAGTAAAGATCAGGAAGCTGTTCTTGTACAAAGAATAACCAGATTCGCTGAAATAGGACTGCCTGTGACACCTGGGATACTTCGTCacttagtttttaaattttatgaacagAATCAAATTAAAGCGAATTTTTACCAGCAAAAGAGCTGGATGTGA
- Protein Sequence
- MEFPDLRKITMGDLPGLIEGAHKNIGMGYSFLKHIERSKMMLFVIDVQGFQLSPRHIKRNSVETILLLNKEIELYKPDLLEMPAMVLINKMDTQGKLLIYYSFLVTCVNLMPPKRAVWSEKDLISAVRAVERGTLSSHEAAKRYKVPRRTIRNHLKSGNLTKSLGRKALLSKDQEAVLVQRITRFAEIGLPVTPGILRHLVFKFYEQNQIKANFYQQKSWM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -