Slae009890.1
Basic Information
- Insect
- Synergus laeviventris
- Gene Symbol
- bab1
- Assembly
- GCA_032275145.1
- Location
- JAUESI010000028.1:4183245-4185055[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.7e-12 1.3e-08 35.1 0.0 1 45 349 394 349 394 0.95
Sequence Information
- Coding Sequence
- ATGGAGACCGAACCTCAGAAGTTCTGTTTAAGGTGGAACAACCATCAAACAAATTTGATTCAATTCTTTGACAAATTacggaaaaatgaaaactacACTGACGTCACTTTGATGTCGGATGCTAGAGAGATAATAAAATGTCACAAAATGGTGCTGGCTGCTGGCTCCTTCTATtttgaaagagtttttaaCAATGTAGGATTTCAAGAGGCAACGACTCTCGTCCTAACTCACACAAATTTTACGCTACTTGAGGCCTTAATAATGTATATGTACCGAGGAGAAATAAACATTCAACAAGATGAATTATCGGCTTTGTTAGAAGTCGCTGAAGAACTTGAGGTCAAAGGTTTGATTAATTTCTCGGAAAAAGGGACAGTGACAAAGATAAAGAGAGAAGATATTCCATCACCATTTTTGaatcgTTCtacaccaccaccaccacctgCACCATCGACAACACCACgggaaaaacttgaaaacaatGGGCCACTTGCAAATCCTTTATCGCATGcagatttatataattttcatacaGCCTCTCAGAGTATGAATCCAATGCCCTCTCATGGACTTTGGCCGGCGATACCTGCTTTTCCGTTCGCTCAACATCCATATCATCCTCATTATTCAGCATTGACTAGATCCTATGTCCATAGCTCTGATACTTCTCCCCtgacaaagaaaaagaagatttcGTCGGCATCAATGGCAATTACGCCTACGCCTACTCCCATTTTACGGACGGCGCTTGTTGGCCAAGAAGTTATGGAAGCAGCACATTCCACATCCGGATCGAACATGGAAACTGTGGAAAATGGATCTCGAAGCAATGGTTCAGCCAACGGTTCTGCAAGTGGTTCTGGAACTTCTCCCATTGATAACGACAGAAGATATAGCACGGATTTTTCTCATCATGAAGACCCTTTGAGTCCTCACACTGATATAGAAGATGATGATAGGAAAAATTCTTCAGGATCACgACGCAACAGTTTCGCCTCCAGCTCAACAGCTCCCAGGGAGTGGAAGCGTTACAAGCAGTACACCCGCGAGGACATCAACGCTGCTATCGATGTGGTCAAAGCTGGAGAAATGAGTGCTCTCAGAGCATCTCGAAGATTCAACGTGCCATCTCGCACGTTGTACGATAAAGTCAAGAAATTGGGAATTAGAACTCAACGACACTCAGGACGACATTCATCCAGAAGCGGAAGCGGACACGCAAACGGAATAAGAATCCGTAACGTCGATAATGACAGTGCTCGTTTCCCGTATGGCGTAGGAGGCAATGCTGATGGTAATATTTATCGAAATGCGTATGGAACAGTTGAGCCGATGGACATGTTAATGAATATGAAACACATCAGTCCAAGCACAAGTCCAAAAGCTCCTGATCCTCCTGCAGAAGATGATAATTTGGAAGATATGGTAGAAGATTTGTCCGTCAAAGCCCCATTACAGTCGACTAGCGACACTGTTATTCGTTCCTTAACTCCAAAAGAGGAATCGAAAGACGAAACACCTGCATCAGATGAAAACTGA
- Protein Sequence
- METEPQKFCLRWNNHQTNLIQFFDKLRKNENYTDVTLMSDAREIIKCHKMVLAAGSFYFERVFNNVGFQEATTLVLTHTNFTLLEALIMYMYRGEINIQQDELSALLEVAEELEVKGLINFSEKGTVTKIKREDIPSPFLNRSTPPPPPAPSTTPREKLENNGPLANPLSHADLYNFHTASQSMNPMPSHGLWPAIPAFPFAQHPYHPHYSALTRSYVHSSDTSPLTKKKKISSASMAITPTPTPILRTALVGQEVMEAAHSTSGSNMETVENGSRSNGSANGSASGSGTSPIDNDRRYSTDFSHHEDPLSPHTDIEDDDRKNSSGSRRNSFASSSTAPREWKRYKQYTREDINAAIDVVKAGEMSALRASRRFNVPSRTLYDKVKKLGIRTQRHSGRHSSRSGSGHANGIRIRNVDNDSARFPYGVGGNADGNIYRNAYGTVEPMDMLMNMKHISPSTSPKAPDPPAEDDNLEDMVEDLSVKAPLQSTSDTVIRSLTPKEESKDETPASDEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01391333;
- 90% Identity
- iTF_01392913;
- 80% Identity
- iTF_01392913;