Basic Information

Gene Symbol
ARID5B
Assembly
GCA_032275145.1
Location
JAUESI010000029.1:13483966-13491052[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.6e-24 2.5e-20 73.4 0.0 1 89 236 322 236 322 0.95

Sequence Information

Coding Sequence
ATGAAGTTCTTCTCGGTTGACACCAGACAGAGGGATGAAGTACTGACGATATCAGAGAAGGTAGTAGTGCGAGTTCATGACCTTGTAACATGGTTGGCGCCGTCTTTGGAATGGTCCTGGGGAAGAGAGGTTTCGTATCCACCTACCCCACTCTCGTCTCCAGAAAGCAGTCCTTTCAAGCTGGACTTGGGTCAACCTCAGGTGTTGACGGATCCTGGTATCGACTTCTCAGACGTCGACAAACAACAGCAGGAGTTCGAAAGCAATCACAATTCGTTAAATCGCTTAGATAGCAGTATACAAACGAAAGTTGTCGTCCTTTCGTATCCTAGATATTGTAGGTACAGAGCCCTTCTTCGAAGACTCGAAGGGTCGGAACCATCCTGGCTCTGGTCTTCGGTAGCAGCGGCTGTAGGTGGTTTTACTGTTTATCCTGGCACAAGGGTCCTTTTCTGTAGAGATACATTCGACTATCCAGATCTCGAAACGCACGAATTGCTCTGCAATCACTTAGCCCCAAAATTAAAAGGAAGGCCTCGAAGAAAACGGAAAAAGCGTAGTGTTTCTCCAGGAGAATCCAGCAATGAAAGTGAAGCTTCCGTTGCGTCTTCTGTAGTTGCATCGACTTCCAAATCCTCGTCGAATTCCATCATCAGTAGATCAACATGTGCTGGAGTACGTCGAAGCGAACGAAAAACGAGCGTCGAGGAGAAGAAATTTCTGACTGATATTCAGAAGTTTATGACTTTACGAGGAACTCCTGTAGGAAAAATGCCCTTGTTGGGTTATAGACAAATTGATCTATACCTCTTTTATACAAAAGTACAAACGTTGGGTGGTTATGACTCCGTCAGCGCTGGACGGCTCTGGAAGTCTATTTACGACGATATTGGCGGAAACACAGCGTCGACGAGTGCTGCAACGATTACAAGAAGGCACTATGAAAGGTTGTTGTTGCCTTATGAGAGGCGTCAGAAGGGCGAAGAGACGAAAGTCAGGCCAACTCATGGGAGAAGAACGAAAACAAGTAGTTCATCAGAGGAGGCGATTGAAATCAAAGATGAACCTGATATCGTTTATCCAAGAGAAGCGACACCACCAAGCGCAACACCCAATTCTACTACAGTCACACCTTCCTTACAGTCAATTCTTTCAACCTCGTCACTTCTTCCTGGAGAGAAGTCTAGAATGGACAGTGGCAAGACCTCTTCGTTGCGGAGTGTGAGGGTGAAGCCAGATCGcctaaaatcccttaacaCAATAATTGCCAACACACCTTCTGCCAGCCAGCAGGCCAGCCAACTGCCAAGTCCTCCTCCTTCCTCAACTTCTTCGTCTACGCCTAGTAGTACACCTTCTACGACCCCCACGGGAGGAAGTCAAAGTGTCTTGGAAAGACAGCTCAATAGTCCGTTAATATCGCAGCAAGTACCACCTCCAAGTCCACCTCCGGATCTACCTGTAAGCGCCGTAACGTCGAATGCTTCCGCGGTAGTAACGCTGACACCTCCACCTGAAAAGGAGATTAGAGAAATCAAGATGGACTCGAAGCAGACTGCACTCTTGGCGCAGGGGAAGGAAAACATTCCTCTCTATGACGAGAAACCAATTTTCCTCGAAAAACCGATAGTACCACCAAGATCTCCTGAAGTAATAGACCTTGAAAACGAGAGTGACACGAGTAGGGATAAGATCATTATTCCTAGTTTTAAGAGACAAAAACTCGAGATCCTTCGAGAAGGAGGTTTGGAAGTCACGGCGGTGGACGCTCGACCAACTGTGATTCAACCCAATTCAACTCCTCCTGCATCACTCAAATCTGAGGAAAAGTCACCTTCTCCCTTACCTCACGCAGTGACACCAAACTCGATACCGAAACTCATCTCCGTCACTGTAACTCCTGACATCGGGCACATGCTTCCATCCCCCCATGAAAATCATAATTCTCATCAACAAACGAGGCATCAAACTCCAACGAAGCAACCCACGAGTCAGAATAGCCACACCTCTCCCGGTAGTAACGCTCTAAACAGTAGAGTCATAAACCTCGGGAATTCAAATACGAGTTTGATCCAGCTATACGCTAATGCAAGCGCCGCTGTTTCGAACGCTGCAACTTCACCATCGTCGAATCACAGATTCGTTACTCCCGCAGTTCCTAACGGAAGGGTGGCACCTCCAAGAGTGACACAGTCCAGGTCGATATTCGCACACAACGAGAAGATGGTCTATGGAAACCCCAAAGACATTCTCACCACTCCGAAGTATCCACCTCCCCCTGTTGTTCAACCTCCACCAAGGAACGAAACTTTACCAGGCGGGGTTCTCGATCTCACTCAGAAGCCTACCTTCTTCAGGCCTAGCTTGGAGATAGTTCGAGTCCCGGTTGTGCCAAGGCCTAACCCTGTTAACCTGGAAGCGAGGAACACGCACAACAAGAACAAAAATCTGGAGTCTCCCAGGAAAGACCAGTTTCAAAACTACTCTAGCGTGCTCGACAGTAGGACGATGGCTTCGAACAACCTCGAGATCACGCTTGTCAACCCTAAAAAATCGCATTCCAGCTCCCCTCAGTTACCGAGTTCACCTCATAGGAATAACAGCCCAATGCCGAACCAGAGGAGACAGCACGTGAATGGAAAGTATCCAGTGAGGAGCGAACCTGTTTCACCCTACACGCCCAGGAAACCGACGCATCCGGTGATACCAAATGTTCCGAATTTAAGTCAGTTGAACAACGTATCTTCCTTCTCGAGGTCGAGCAATCACCACAGTTCTCTTGATAGGACGAAGTCTCTAGAGGCAGCAAGAGACTATCAGCGCAGGATTAGTGAGGGAGATAAGTCGACGTTGGGACACCAAATCCAGGAGATGTCGCAGAAGCAAAGTGACTCAGCAAGGAGACACAGCGTACCGAATATTCCTTCGGGATTTGTTCCTGCCATTTCGCAAAATAATGCGGCCTTCCTTGCACAACTGCCGAATAACTCTGGAAAGTTCCTTCCGATGTTGGACCCAGTGTACTATCCGGCGTTATATAACGGATTCTTCCCTCCACCGCTATCAGCTGCTGGATCTGCACCATTTTTGTCTCCAGAGTTCAGCGCCTATTACAAGGAACTGCTGGCATCCTCTTCGCAACCAAGACTGGGGATGGCGGGACAGCATCAAAACACTGTTCCGACGTCCAAGTAG
Protein Sequence
MKFFSVDTRQRDEVLTISEKVVVRVHDLVTWLAPSLEWSWGREVSYPPTPLSSPESSPFKLDLGQPQVLTDPGIDFSDVDKQQQEFESNHNSLNRLDSSIQTKVVVLSYPRYCRYRALLRRLEGSEPSWLWSSVAAAVGGFTVYPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPGESSNESEASVASSVVASTSKSSSNSIISRSTCAGVRRSERKTSVEEKKFLTDIQKFMTLRGTPVGKMPLLGYRQIDLYLFYTKVQTLGGYDSVSAGRLWKSIYDDIGGNTASTSAATITRRHYERLLLPYERRQKGEETKVRPTHGRRTKTSSSSEEAIEIKDEPDIVYPREATPPSATPNSTTVTPSLQSILSTSSLLPGEKSRMDSGKTSSLRSVRVKPDRLKSLNTIIANTPSASQQASQLPSPPPSSTSSSTPSSTPSTTPTGGSQSVLERQLNSPLISQQVPPPSPPPDLPVSAVTSNASAVVTLTPPPEKEIREIKMDSKQTALLAQGKENIPLYDEKPIFLEKPIVPPRSPEVIDLENESDTSRDKIIIPSFKRQKLEILREGGLEVTAVDARPTVIQPNSTPPASLKSEEKSPSPLPHAVTPNSIPKLISVTVTPDIGHMLPSPHENHNSHQQTRHQTPTKQPTSQNSHTSPGSNALNSRVINLGNSNTSLIQLYANASAAVSNAATSPSSNHRFVTPAVPNGRVAPPRVTQSRSIFAHNEKMVYGNPKDILTTPKYPPPPVVQPPPRNETLPGGVLDLTQKPTFFRPSLEIVRVPVVPRPNPVNLEARNTHNKNKNLESPRKDQFQNYSSVLDSRTMASNNLEITLVNPKKSHSSSPQLPSSPHRNNSPMPNQRRQHVNGKYPVRSEPVSPYTPRKPTHPVIPNVPNLSQLNNVSSFSRSSNHHSSLDRTKSLEAARDYQRRISEGDKSTLGHQIQEMSQKQSDSARRHSVPNIPSGFVPAISQNNAAFLAQLPNNSGKFLPMLDPVYYPALYNGFFPPPLSAAGSAPFLSPEFSAYYKELLASSSQPRLGMAGQHQNTVPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00676481;
90% Identity
iTF_00010870;
80% Identity
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