Basic Information

Gene Symbol
KDM5A_1
Assembly
GCA_032275145.1
Location
JAUESI010000010.1:11108291-11121486[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-25 8.7e-22 78.0 0.0 2 89 107 190 106 190 0.94
2 2 9 3e+04 -4.0 0.1 52 81 826 853 821 855 0.60

Sequence Information

Coding Sequence
ATGGGTTCCAAGTTTGATGGACACGCTACATACGAAACTCGTTTTGGAACTTACGTTCGTAAAGACATGACCGATAGGAGTGACTCTGATTTCCAATTTGTCATTCCACCAGAGGCCCCGGTCTTCGAACCTACCGCCGAGGAGTTCCTAGATCCCCTCGGATACATCGCAAAGATTCGACCCATCGCTGAGAAATCCGGAATCTGCAAAATAAAACCCCCCCCCAATTGGCAACCTCCCTTCGCCGTTGATGTcgacaaattcaaatttgttccTAGAATACAGAGGTTAAACGAATTAGAAGcgaaaacgagaataaaacttaattttctagATCAAATCGCTAAATTTTGGGAACTTCAAGGTTCTTCGTTGAAAATTCCACTAGTAGAGCGTAAAGCTCTAGATCTCTACTCTCTACATAGAATAGTAACTAGTGAAGGTGGAATAGAAACAGTGACGAAAGAAAGGAGATGGGCAAAAATCGCCAATAAACTAGGATATCCTTCTGGACGGAGCGTtggaagtattttgaaaacccATTATGAGAGAATTTTATATCCCTTCGACGTTTTTAAACAAGGAAAAACATTGACTGACATTaAAATAGAACCAGAAATAGAGGCGAATGAGAAGAAAGATCGGGATTACAAACCCCATGGCATTATATCGCGACAGCAAATCAAACCACCAACCGCGAAGTTTTCTCGTCGTTCGAAACGATTTAGTGGCCAAGAAGACAACAAAGATGCTGTGTCAATTAAACAAGAAGATTGCAAGGAAGACTGTGATTCTGATAATGAATGCAAAGAAGAAGTTAAAAGCAAAAGTTTATCTCCGGAGAAAGGAGCAGAAAACAGCAAAGAGCTGAAGAAACTACAGTTTTATGGACCTGGGCCAAAAATGGCTGGATTTAATACCAAAGAGGGGAAAAAGTCCAACAAAACAAGGGGTATCAAACTCACCTACGAATTCGATCCGCTGGCTAAGTATATTTGCCATAATTGTGGAAGAGGAGACAATGAAGAGAACATGTTGCTGTGCGATGGATGTGACGATAGTTATCACACTTTTTGTCTGCTTCCACCTTTAACTGAAATCCCAAAAGGCGATTGGCGTTGCCCAAAATGTGTCGCCGAAGAGGTTTCAAAGCCGATGGAAGCATTTGGTTTCGAACAGGCACAGAGAGAATACACTCTTCAACAGTTTGGAGAAATGGCGGACCAGTTTAAGAGCGATTACTTCAACATGCCTGTTCACATGGTGCCGACTTCTCTTGTAGAAAAAGAATTCTGGCGAATAGTTTCATCGATTGATGAAGATGTTACAGTTGAATACGGCGCTGATCTTCATACGATGGATCATGGATCTGGGTTTCCTACAAAAACAAGCGTGAATCTCTTCACCTGCGATCAAGAGTACGCAGAATCTCCCTGGAATCTTAACAACCTCCCAGTTTTACATGGAAGTGTTTTGGGTCATATTTATGCAGACATCAGTGGTATGAAGGTACCTTGGATGTATGTTGGTATGTGCTTCGCGACATTTTGCTGGCACAATGAAGATCACTGGAGTTATTCCATTAATTATCTGCATTGGGGTGAGCCAAAAACGTGGTATGGAGTCCCTGGTTCTAAGGCTGAGCAGTTTGAACATTCTATGAAATCTGCAGCGCCGGAATTGTTCCACAGTCAACCGGACTTGTTACATCAACTAGTTACTATAATGAATCCTAACATTCTCACAAACGAAGGAGTGCCAGTATTTCGAACCGATCAACATGCCGGCGAATTCGTAATTACTTTTCCTCGAGCATATCATGCTGGATTTAATCAAGGATACAATTTCGCTGAAGCAGTGAACTTTGCACCTGCTGACtggTTGCGGATGGGTCGAGAATGCGTTTCTCATTACTCAAATTTGAGAAGGTTCTGTGTTTTCTCACATGACGAACTGGTTTGCAAAATGTCCTTGGAACCAGATGCATTAGACATTGGAGTGGCTACAGCAACTTACCACGATATGTTACAAATGGTAGAAGATGAGAAAAAGCTGAGAAAGACTCTTCTTGAATGGGGAGTGACGGAGGCAGAACGCGAAGCTTTCGAATTACTTCCCGATGATGAGAGACAGTGCGAGGCATGTAAAACTACCTGTTTTCTGAGTGCTGTAATCTGTTCGTGTCAAACTTCGCATCTAGTTTGCTTGAGACATTTTACGGATCTTTGCGAGTGTCCGCCGAAACATCATACTTTaagatatagatatactttAGATGAGTTACCAATCATGCTGCAGAAGTTAAAACTCAAGTCCGAGTCCTTTGACTCATGGGTGTCGAAAGTGAAAGAGGCGATGGATCCCAAAGGGGAGAAAATCGAACTCAACGAGCTAAAAGAACTCCTCAGTGAGGCAGAAAGTAAAAAGTTCCCTGAAAGCGAACTCTTGACTGCACTCACAAATGCGATTCAAGATGCTGAGAAATGCGCAAGTGTTGCACAACAGTTGTTGAACAACAAACAACGCACGAGgACAAGACACTCTGTTGAAAACAAGTACAAATTAACGGTGGAAGAGTTGACGCTCTTCTATAAGGAGATATCCAATTTGTGTTGTGACCTTAAAGAAGCTGAAGGCATCAAGTATATTTTGGATCAAGTCGTACAGTTTCAGAAAGATGCGGAAGATTTAGAAGGGAAGGATAATGAGTGCGATTTCGAGAAACTGGAAAAATGTATCGATTTCGGTGATTCAATCTGCATCGATTTACCACAACTCGTAAGATTAAAGCAaAAAATGACACAGATCCAGTGGCTGGAGGAAGTAAAAGCAATTCAGGAGGAGCCAAAGACTATAAGCCTCGAGGAACTGGCCAGTTTGATCGAGAAGGGAATGACGATTCCACCTCACTTCAGTATTGAAAACACGCTTTCCAAATTGCAAGCCCTCATGAACAGTATTGATGAATGGGAAGGGAAGgccaaaatatttcttcacgTTAAAGAACGACAGACGATCAAAGCAGTCGAGGAATTTGTTCAAGAGGCTAAGGATATTGATGCCTACTTGCCAAGCTTGAGTAATCttcaagaaattctaaataagGCAAAGAATTGGACCAAGACAGTGGAGGAAATCCAAGGGAAGGACAATATTGTCTACTACGACACTCTTGATGAACTTGTCCGAAAAGGAAGAAACATTCCACTTCACCTGGATTCGCTGCCGATCCTGGAATCCACTCTCTCAAAAGCGAGATCGTGGAAAGACCGGACGGCGAGGACATTCCTGAGAAAAAATTCGCATTATACATTAATGGAAGCACTTTCTCCTAGAGTTGGAGTCGGAGTTCAATCCATGAAGACAAAAAAGAACAAGGGTGATGATTCGATTGGAGCTGTTTACGTCTGTGACACCAAACTTGATGATTCCAATAATTCTGCGACTGTAGTTGCTGCGTTTAAACTCGCTGAGCAACGGGAAATGGAGGCTATGAAAAACTTGAGGCAGAAAAACATGATGAAGACTCAACTTGAAGATTCCAAATATTGCGTGTGTCGTAAATCCAGGTTTGGGACGATGTATCATTGCGAATTGTGCAGAGATTGGTTCCATtCTCACTGTGTTCCTCTGCCCAAATTGTCTATGAAGGGAAAAACGACGTTACCACCAGACATGAAATTCCTATGTCCCTGTTGCTTGAGGTCTCGAAGACCACGTTTAGAGACAATCCTATCACTTTTGGTTAGTTTACAGAAAATTCCTATTAGACTACCCGAAGGCGAGGCTCTACAATGTCTTACTGAACGAGCCATGAATTGGCAGGATCGCGCCAGGAAAACATTAGCTACAGAAGAAATTAGCTCGGCGCTCTCGAAACTAACTGTTCTTTCGCAGAAACTAGTGGAGGCCGCAGCGAGGGAAAAGACTGAGAAGATCATAAGCAGCGAATTGAAGAAGGCCGCCAACAATCCAGAGCTTCATCAGAGAGTTCAGGCGATTGCACCACTTAGCGGAGTGCACTCGGATGATAGTGCTCTCAGCCCCTTGGAGGAGGATGAAGATGACATACCAATCGAGGATGATGAACCTTCTTGCAGTACATTTAACAGTAATGAACACGCTTATTCCTATGtttccAAGTTCCATCCTAAGTTGGAAATAAACCCGAAGGATCCAGATTCTCTAATCGTTTTATCAGAATCCGTTAAAACCCGCCTAGAAGATATGATGATGGAAGGTGACTTGTTGGAAGTAGCACTGGAGGAAACTCACATCATATGGCGCATTTTGAGTCACACCACAAGTCCAAAAAGCGTCAGAAAATATGGAAGTGTGGATGATACCAAGTCAAACCTGGATGGAGAGGTAAAGGAGGCTAAAAAGCGTGGTCGGAAACGAAAGTCTGATGAATTTGATCTCCTGAAGATAAATCGTCAACGACCTGACGACAAAGCTTTATTCAAGCAACGCAAAGGGTTCGCAGTAAATAAAGATAAGAAATTGTCTGCCACTGAACAAGTTAAGCGCGGGCCGCGGAAGATGAAGCGAAAGGAAGGAGAGGAAGTGCCGAAAAAGCGGGTGGGTCGCAAAAAAACTAAACAGGATACTTCTGAAGACGAAGAAGACTGTGCAGCACTCAGTTGCCTGCGACCCAGTGGTCACGAAGTTGACTGGGTCCAATGTGATGGTGGCTGTAATGGATGGTTCCACATGCACTGTGTCGGCCTGGACAGAACTGAACTCGCAGAAGAAGACGACTATGTCTGTGCTAATTGTAAAGAAACGGATCAAAACACGACGttaGCAGAGCCAGACAGACTGGCTGAATCTTTAAACCTGGACCCACTTCTATCCGTTTCTCAATCCCAGGGATACCACAGCGGGGATGCCGATGGGGATACAGACACAGAAAGTCAAGATGCGATTTCTTTCATTAGTACTTTCTAA
Protein Sequence
MGSKFDGHATYETRFGTYVRKDMTDRSDSDFQFVIPPEAPVFEPTAEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTSEGGIETVTKERRWAKIANKLGYPSGRSVGSILKTHYERILYPFDVFKQGKTLTDIKIEPEIEANEKKDRDYKPHGIISRQQIKPPTAKFSRRSKRFSGQEDNKDAVSIKQEDCKEDCDSDNECKEEVKSKSLSPEKGAENSKELKKLQFYGPGPKMAGFNTKEGKKSNKTRGIKLTYEFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESPWNLNNLPVLHGSVLGHIYADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAEQFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVSHYSNLRRFCVFSHDELVCKMSLEPDALDIGVATATYHDMLQMVEDEKKLRKTLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVICSCQTSHLVCLRHFTDLCECPPKHHTLRYRYTLDELPIMLQKLKLKSESFDSWVSKVKEAMDPKGEKIELNELKELLSEAESKKFPESELLTALTNAIQDAEKCASVAQQLLNNKQRTRTRHSVENKYKLTVEELTLFYKEISNLCCDLKEAEGIKYILDQVVQFQKDAEDLEGKDNECDFEKLEKCIDFGDSICIDLPQLVRLKQKMTQIQWLEEVKAIQEEPKTISLEELASLIEKGMTIPPHFSIENTLSKLQALMNSIDEWEGKAKIFLHVKERQTIKAVEEFVQEAKDIDAYLPSLSNLQEILNKAKNWTKTVEEIQGKDNIVYYDTLDELVRKGRNIPLHLDSLPILESTLSKARSWKDRTARTFLRKNSHYTLMEALSPRVGVGVQSMKTKKNKGDDSIGAVYVCDTKLDDSNNSATVVAAFKLAEQREMEAMKNLRQKNMMKTQLEDSKYCVCRKSRFGTMYHCELCRDWFHSHCVPLPKLSMKGKTTLPPDMKFLCPCCLRSRRPRLETILSLLVSLQKIPIRLPEGEALQCLTERAMNWQDRARKTLATEEISSALSKLTVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSALSPLEEDEDDIPIEDDEPSCSTFNSNEHAYSYVSKFHPKLEINPKDPDSLIVLSESVKTRLEDMMMEGDLLEVALEETHIIWRILSHTTSPKSVRKYGSVDDTKSNLDGEVKEAKKRGRKRKSDEFDLLKINRQRPDDKALFKQRKGFAVNKDKKLSATEQVKRGPRKMKRKEGEEVPKKRVGRKKTKQDTSEDEEDCAALSCLRPSGHEVDWVQCDGGCNGWFHMHCVGLDRTELAEEDDYVCANCKETDQNTTLAEPDRLAESLNLDPLLSVSQSQGYHSGDADGDTDTESQDAISFISTF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00873598;
90% Identity
iTF_01394066;
80% Identity
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