Basic Information

Insect: Synergus japonicus
Gene Symbol: -
Assembly: GCA_900474275.1
Location: UCOH01011878.1:46205-53662[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.5 2.6e+02 2.8 5.4 2 23 847 869 846 869 0.89

2 14 0.0028 0.29 12.1 0.1 2 23 947 968 946 968 0.96

3 14 0.13 13 6.9 0.8 3 21 1134 1152 1133 1153 0.96

4 14 0.58 59 4.8 0.3 3 23 1170 1190 1168 1190 0.96

5 14 0.036 3.7 8.6 1.8 1 23 1266 1289 1266 1289 0.96

6 14 0.025 2.5 9.1 0.5 2 22 1321 1341 1320 1344 0.88

7 14 0.41 42 5.3 0.2 1 23 1364 1386 1364 1386 0.95

8 14 0.18 18 6.4 1.8 1 21 1433 1453 1433 1454 0.94

9 14 0.0023 0.23 12.4 1.5 3 23 1914 1934 1912 1934 0.95

10 14 0.9 92 4.2 1.0 2 23 2158 2179 2157 2179 0.96

11 14 0.48 50 5.0 0.3 1 23 2239 2261 2239 2261 0.96

12 14 0.19 19 6.4 2.4 1 23 2338 2362 2338 2362 0.94

13 14 0.025 2.5 9.1 0.2 1 23 2381 2406 2381 2406 0.94

14 14 0.013 1.4 10.0 2.2 1 23 2408 2430 2408 2430 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.5	2.6e+02	2.8	5.4	2	23	847	869	846	869	0.89
2	14	0.0028	0.29	12.1	0.1	2	23	947	968	946	968	0.96
3	14	0.13	13	6.9	0.8	3	21	1134	1152	1133	1153	0.96
4	14	0.58	59	4.8	0.3	3	23	1170	1190	1168	1190	0.96
5	14	0.036	3.7	8.6	1.8	1	23	1266	1289	1266	1289	0.96
6	14	0.025	2.5	9.1	0.5	2	22	1321	1341	1320	1344	0.88
7	14	0.41	42	5.3	0.2	1	23	1364	1386	1364	1386	0.95
8	14	0.18	18	6.4	1.8	1	21	1433	1453	1433	1454	0.94
9	14	0.0023	0.23	12.4	1.5	3	23	1914	1934	1912	1934	0.95
10	14	0.9	92	4.2	1.0	2	23	2158	2179	2157	2179	0.96
11	14	0.48	50	5.0	0.3	1	23	2239	2261	2239	2261	0.96
12	14	0.19	19	6.4	2.4	1	23	2338	2362	2338	2362	0.94
13	14	0.025	2.5	9.1	0.2	1	23	2381	2406	2381	2406	0.94
14	14	0.013	1.4	10.0	2.2	1	23	2408	2430	2408	2430	0.97

Sequence Information

Coding Sequence: atggcCGACTCTGTAAAATCTTACTTTGACCCTGAACCTTCTTGTTCTAATACCACCATGCTTGGAATTAATGAGCAAAAAGTAAATACCATCAAAACGCGAGATTATCGCCCAGCCCCAGCATCTAGGAAacgaaaaagagaagaaaagaacTACCAGAGGAACAATAAAGAGTTATTCAAAATGTGCAAACCCTTCTCCATTAAATTAGAGCGTCTACCCCAGCTACCCATATCTAAAAGTCTAACAAAATGTGACCAGGTGGTTCGCACTAAGAGAAGACACAGGTGGAGCAAAGGGTTTGCAGATAAAGTAAGAAAGAGATCAAAATCTGAGAAGCCCACTGAGAAGTCGATtgagaaatctaaaaaatctcAGACACtcgagaaattttcagaggcTAATAACATTTCTAATTCATCTATGGAACCAGAACATCCTTGGGGATGTTGTCGGATGATACCTTTCAAAATACATCAATCAAGGAATCACAGAAAATCCTCCTTGAGCAAAAACAGAGATTCGATTGAACCTAGTCGCTCACAAACCGACGTTCCAAACACGAATATTACGGAATATACCGTGTCAACAATGTTCTTAAGAGACATGAAACAATCTCAGGCCAAATGTTCTagctcaaaggcaaaagagaaCGAAACTCCGACTGATATTGTAAAAAAGCACGACTCACATTCCCTACTTTTATTTCCAGATGAAGAAAAGAGAACTTCTTCTGCCAAGGAAGAACGTACGTATAAAACTGTAGAAAACGAATTGGTCTGCAGAAGAATATTACCTTACACACGAAAAACAAAGTGCAAACCATTGCTTAACTCGCCAAATAATGCCATTTCACAAGTTTTGAGTAGTAAAAATTCAGCTCAGTCCAAATCCGTCCAAAATCACAATCTCAAAGaactaaaacaaaaaacttcTGAAAGTTGTTTGAAAAAGGAAACAAGGATTTCTGAAACCGAGAAATATTCAGGTTGCAGCAAAACAGAACCTTTACCGTTAAAAAccaattttagagagaaagAACAAAGTCTCCATAAACTGAGTAATAATGACACGACTGTTGAGATTCGTAAAAGACCCTCGGAACTCGAATCCAAAGTTTGTGAAAAGACTGATGAAACCAAAGTACCAGAACCAAAGGTGACGAGGGATTACGATAATGAcgagaatatggaagacaacAATTTCACGTGGAATAGTTCTAATATGtggaaatataaaagaaaacacAGAATCAGACGCATCAGCAGCAGTTCAAGTGAAGAGGAGATTCCCAGGAAAAAGCCTAACTTATCTTCCACATTTGATTGCAGAAGTTTGAGTGAAATGAAACCAGGTCCGAGTTCTACAAAAGGTAAAAGAATATCATATTCGGGTATGCAAACGTTATGTCCTTCTTCATGTATGCATACGGAACATCAAGGTCACATTAATTTCTTATACAACAAACCAAAGGTCAGACCTCTTAAAGAAAGTCGAGTTCTTCTTCAAAGATTGGAAGATGTAAAGAATGATCTTGAAGTTATAAGATGGAGGAATAGGTTGATTAAGTTAGAAATAGAAGAAGTGGAGgaagaagaaagagaagaagaaaaagttgaAAGAGTCTTAGATGATGATGAGAAAGATTCAAGATACCATATGTATGATGACAGGACCGTATCGAATGATGCTTTAAGAGAACCAATATATCAAAAAATGCGAGAAATGACTGATTTTGACACAATGGGCGCACCTTGTCAAGATTATGATAAGAGCAATCGTTCTGAAGGTCAAATGTTCAGTAATTCCACGCTAGATATGACGAAGTATTGTAATAACGCAGTGGATGAACCCCAATATTTGAAGGATGACATACGTCAAGTTGACCTGTCGAAAGATGATGAAGCTTTAGATGATCTTCTGAGAGATGATGATGACATCCCTCTTGAATTTAGCGAGTACCCAAAAGTACTCTTGATACGGTTAGAAAATCTAGTCGGGTCTTTTGAAACCGAATATTCTGCtttcgaaattgaaaacttaGAAGAGAAGTTCATAGATTTTATGATGAACTCTAATTTTACTTATGACAAGCAGTCACAGTCATTTTTCGCAGTTTACAAACGTCTTCACGCTAAGAGAGCAAAGGATAGGGAGTTGGAAATGTTAAATCGACAATCCCCATTTTATGCCAATGAAGATGCTTTAGAGGTACATGAATTGGAGGAGACTGATTCTCAAGACGATTATGTAGATGAAAAGCCTTTGGTAATTGCCTTGAATGCTGAAAGAGAAGTTCCTAGGAATGTTGAATGGGTCTCTGACGTAAGTAGTACCAATAGTGCTTCCGAAAACATTCTTCCTTCTTCAGTTAATCACGATTCCGAATTGGCAACAATTACACCTCTGCCGAATGATGCGAATCAATCAATCGAATCTCCTATCTGTGGTAATAATGAAATAAGGCCCATTGAGTTTGTTACCTGCGAAAATGTTTCTAAAGAAGCAGAATCGCCGAAAGAAGATTCTTTGTACATTACATGcaaattttgtaaagtaagttttaaaaatctgcaTACGTTTTCCTTGCACAAAGCAGAATGCCACGTGAAAAATAAACTGTCCTTGATGTGTGAATATTGCGATAATTCTGTCCCTCAAAAGCAGAAAACAACCAGTAAGGCTAATGAGAAAACAACCAGTAAGGCTAATGAGAAAACAAGCAGTAAGGCTAATGACAAAACAAGCAATAAGACTAACGAGAAAAGTAAAGCTAATGAGAATAAAAGTGCTAGTGGTcatcaaaagaaaaagttaataCCGGCGACTCAGCATTTATCTTGTGGCGTTTGTTCGGTCACTTTTGAATCCAAAGAAACTCTTTGGGATCATATTCTCAAGCACACAGAACGAGAATTGCAGGATGCCTACAATGATGCAAAGAAAAACAAGGATCTGGGATTGgagaataaagttgaaaattcaaaaaagaaaacaaacaagAAGAGTAAAAGCACATCAAAGGAAGATGGTGAACCGAAGAAGGATCAAAAACAATTGCCGACTAAGTATACTCAATGGAAAGATcgtattctttataaaatcagTACTAATGACGAAACGGATAAGAATGTTTCTATAAGTCAAGATCCTAATGAAAACCAGGCTGAAGAAATCATTTTGAGTTCTTCAGGGAGTGAAATATGCATAGAAAGCAATAAGGATTGTGAAATTTTGGATATCAATTCATCTGCATCACGAAGCTCTGTCATTAAGAATACAAATTCGGTTCAAGAAGGTGACGTAGATTCTTCGAAAGTTGTTACAATGTGTCCTTGTCATAGAAATGATACATCTACCATGGTCAATGGAGACATGCAAATAGAAATGGTCCttctttgtaatatttgtcAAGTTCTTTTTCGACGACGAGATTGCTTTGAGGTGCACTATAGGGTCAATAAGTCATGCAGTATGGACAGAACGAGTAGAActccaaaattattttgcagttattgtcaaattattttgaattcattgcCGGAGATGCGCGATCATTTGAAGAAACACGCACAAATTAATCTTCACGGTCATATCACCTTCCTGTGCAACATCTGCAAAGTCATGTTCTTTGGTGTTGGGTCCCTTTTCTACAGTCACTGGTTTAATCACAACAAGGATGTAAGTTTCCTAGCCAGTCGGTATTCATTCCCAAAGTTGTCTATAGTACAGATTGTGAACACGCCCAGCAATACAATACAGAATCAGAAAGAGGAGTATCTTTTCGTTGCAGAGTTCGTTTGCAAGGAGTGCAAaaTACCTTGCGGATCAGAAGCTGATTTACAAAACCATACTTGTAGCATGCATCGAGCTACAGCTCTATTTCCCGTTATGCCTCCAGTTCCATTGAGCAAGCCACAAGAGACAGCACAGTCAACCCAAAATGTTACTGTAAGAGTAACCTGTTTGGAGTGCAGTAAAGTATTCTCTAGCAAAAAAGAATATGACCTTCACGAGAAAGTTTACAATCATTTGAATTCTGTTAAGCCACAATATATTTGTGTATCTTCAGATTACAATGAAAAGGCTTATATTTGTACTCAATGTAAAACTGTACGTATGTCTTTAGAAGACTTAAAAGAACATTGGATTCTTCATCGTGCGTTAAGAGAAAAGTTTGTATGTGCCAACTGTCCTGAATTGCGTTCCAGTTTATTTGAAGAAGTTGAGGCCCATTGCAAAAGTTGCTTTAAAAACTTAGTTGCAGTGTGCGCAGTTGTCTTGGTTTCAGCTTCTCATCAATGTAAATCCTGCAATCTTCATTTTGAAACCAGTAATGAATGGAAAGAACATCGTCTAATGTGTTTGCCTTCGCCATTGTCGCAAACAACTATCATTAGAATCGCTGATTTGGTAAATAACCCCTCAAATCCTCCAGTTTTACCTTCGGTTATAGATTCAGTTGAATCTTCAGTTTTATCTGCAGCTCCTCCTGCTGCTCCACCTGCAGTTGTATCTTCAGTTCCACCTACTGTGTCATCTTCAGATACAACTTCTTTAACATCTCTAATTCCCTTTACAAAAGCCACTTCAACTGCAGTTCCAGTTACACCTTCACTATCGCCATCAAATAACACTAACCCTGTTTTATCGAAACCTGCATCTAGTAAACCTAAACTTGTTTCTGTTAATTTATTAACGAAGTACTTATCGCCGAATTCAACTGCCGCGACAAAATCCAAAAAGAAACATCAAGTCAATCAAGACGTGGAGATAATTGATATTCTTTCCGAAAGCAGTTCAAGAAGCTCCGTAGCTGAAGATCATGGAACGAAACATCCTGTGTTGAATACATATAATGAACCATCGACTTTAGAAGTTGATCCATTTGAATCCTATATTCCTGGTAATTTGCAGAATAAACATAGACATAAAGATGCTTCACTTTCTAAATCTGTTGTCTGTTATCCaccaaaaagaaagaatattaaaattaagccAAAACCGACACCAAAAAAAGTTCCCACGAACACAACTAATACGCAGGAGAACACTATTAGTATAGATTCAGAGAAGATGAGTTTAGCCATGACTGCCGTGAATCCAGAGTTTGAATTCCTGCTTTcagaattggaaaatttagaaaaaagtacCGAACCTTTAAAGAAGTCCAATAATGTCCGAAATATTCGACAAAAATCTACAAGTACAGAATTTAATCACGAAACTTCTCTTTTAAGTACTCCAAGTAcagaaaattctaatatttttgaagatgCTAGTTCATCAGTCGTATCAGAAACATCCTCATCTTCAAAGAAGACAGAGAAAGAAACTCCTCTTCCCTTTGAAGTCGTCCTTTTACAAGATGAAGAAGCCGATAGTCTAAAATCAGGAACTGGTTCTCAAATTTCAACTGCTCAAGTGgatattaattctaataaatcaACGAATCCAGAAAATGCACAAATTGATGTTCCTGATCAGCTCACTAATAACAACAGTACTTCCAGTGATAAAGATACTCCATCCGAAACAAATACCGCAAGCATAATTGAGGAGTACATCGAATACATCATGATGGATGAAGCTGCAGGTGACAAGTCTCCAGCTAAAGCGAAGGATCCTGTTCCTAATAATCCAGTACCCGTTGAAGTTACCTCGAAGGTTGAGAAAGTAGCTCCCTCGCGTCTGCGTGTCAGGAGCTTGGCGGAACTACAGGAGATAAAAATGCATCTCTGTGATTATTGCGGACAGAGTTTCGATTCAAGGGCGAAGTTCGAGGAACATACCCAATTACATTGCGGAGAGGCTCTACCCGCAGATTCATCACAACACCCACCACAACCACCTTATAAAGAACTTGTTCAAAATATAAGGCCTCTAACCGAGAATTCAAACGAAATTGATTACCGGGAAGCTTTGacacaaaatttattgagaagAGGTGTCATTTCTGCAAATATGGACTTTGTTTCTCCTCAATTGCCCTTAACTATTCAAGGGATTAACGCATCGACGTCTAAGGCAAATATGACCCCTGTTTCACCAAACATCGTCATTCCAGACACAAAAAGAAAGCAGCCTCAGGGAACCTCTTTGTTGAAGAATCAACAAACCTATAGTAATAATACAGGTGTGATTACACCTTCCAGTACTTCACGTTTCAGCACTTCAGGTTCTAATAGCATTCCTCGTACAGGTACGATTCAATTACCAGAACGAACTGGTGTAAGTATCTTGCAGAAACGACCCTCAGGTGCTGCAACGAGGATTCAAAATCTCTCCCATTCTCAAAAGTCTATGACTCCTAATGTGATTCAACATCGAGGCCTACCACAAGTTTACGCGAGCAGGCAGTCTGTGAAAATAAGTAATTCATTTGGATCTTTGCATAGATCAACACGGAATTATACCTCTGGTGGATCAATGACTATTCAACCTGGGCTAGAGAATCCCAGCAGCTCTTTGACCTGTGAGACTTGTCACTTCACTGCCAAAAGTTTGCCTGAGTTCTCTTCCCATTTGATAATGCACTACGTGGAGAATTCAACAGAGCAAAAGAACCATAATCATCTTCAAAATCACAATCAGTTGATTGAAGAAACTTTGATGAACAGTCCGAATACCTCAGGAGGTCAGACTGTATGTGATGTGATTAACGCAAAATCGGCTTCGGCCAGTGGAGACTGGCAAACTCCACCGCGATATGTCTACGCTTGTGAATTGTGTGATTTTCGAACAGAATCCAAAGCTTCGATTCGTCTTCATGAGAAAAATCATTCGACGGTAGCAATTATGCGGCAGAACAATTTAGAACGTTTGCAAAATCATCGGATGATTCAACAACCTTTCCAAACacagcagcagcaacagcaAGAACCGAGTCAGATACACTTTGTTCCAACCTTTTCCCAGCTGATTGAGACGCGCAAACCAAATCAACCAGCTCCGTTGACTAATCATGACAAAAATGGGGTCAGTCTTTACACTAGGGTAAGCGGTGATATTTTTCAGTGTCAATTGTGTAACCAATTTCTATTTAAGTCACAAGAAGAGTTTAATAGACATTTGAATAGATCTCATAAAGAAACTCGCAAAGAGGTTGTCATAGAAACTGCTGATTCAAGTACGGTATGCTTTGTTTGCGATTATTGTGAAACGCCACAGATTTTTGAGTCGGAAGTTAACTTGAGAAAACATATGAACTTTTTGCATAATCACGTATGTCAAATTTGCTCGTTACGGTGCACGTCTAGGGAACTGTTACAGATTCATGTGTTGAGTCATAAGTATGAGAATCAGACTTAA
Protein Sequence: MADSVKSYFDPEPSCSNTTMLGINEQKVNTIKTRDYRPAPASRKRKREEKNYQRNNKELFKMCKPFSIKLERLPQLPISKSLTKCDQVVRTKRRHRWSKGFADKVRKRSKSEKPTEKSIEKSKKSQTLEKFSEANNISNSSMEPEHPWGCCRMIPFKIHQSRNHRKSSLSKNRDSIEPSRSQTDVPNTNITEYTVSTMFLRDMKQSQAKCSSSKAKENETPTDIVKKHDSHSLLLFPDEEKRTSSAKEERTYKTVENELVCRRILPYTRKTKCKPLLNSPNNAISQVLSSKNSAQSKSVQNHNLKELKQKTSESCLKKETRISETEKYSGCSKTEPLPLKTNFREKEQSLHKLSNNDTTVEIRKRPSELESKVCEKTDETKVPEPKVTRDYDNDENMEDNNFTWNSSNMWKYKRKHRIRRISSSSSEEEIPRKKPNLSSTFDCRSLSEMKPGPSSTKGKRISYSGMQTLCPSSCMHTEHQGHINFLYNKPKVRPLKESRVLLQRLEDVKNDLEVIRWRNRLIKLEIEEVEEEEREEEKVERVLDDDEKDSRYHMYDDRTVSNDALREPIYQKMREMTDFDTMGAPCQDYDKSNRSEGQMFSNSTLDMTKYCNNAVDEPQYLKDDIRQVDLSKDDEALDDLLRDDDDIPLEFSEYPKVLLIRLENLVGSFETEYSAFEIENLEEKFIDFMMNSNFTYDKQSQSFFAVYKRLHAKRAKDRELEMLNRQSPFYANEDALEVHELEETDSQDDYVDEKPLVIALNAEREVPRNVEWVSDVSSTNSASENILPSSVNHDSELATITPLPNDANQSIESPICGNNEIRPIEFVTCENVSKEAESPKEDSLYITCKFCKVSFKNLHTFSLHKAECHVKNKLSLMCEYCDNSVPQKQKTTSKANEKTTSKANEKTSSKANDKTSNKTNEKSKANENKSASGHQKKKLIPATQHLSCGVCSVTFESKETLWDHILKHTERELQDAYNDAKKNKDLGLENKVENSKKKTNKKSKSTSKEDGEPKKDQKQLPTKYTQWKDRILYKISTNDETDKNVSISQDPNENQAEEIILSSSGSEICIESNKDCEILDINSSASRSSVIKNTNSVQEGDVDSSKVVTMCPCHRNDTSTMVNGDMQIEMVLLCNICQVLFRRRDCFEVHYRVNKSCSMDRTSRTPKLFCSYCQIILNSLPEMRDHLKKHAQINLHGHITFLCNICKVMFFGVGSLFYSHWFNHNKDVSFLASRYSFPKLSIVQIVNTPSNTIQNQKEEYLFVAEFVCKECKIPCGSEADLQNHTCSMHRATALFPVMPPVPLSKPQETAQSTQNVTVRVTCLECSKVFSSKKEYDLHEKVYNHLNSVKPQYICVSSDYNEKAYICTQCKTVRMSLEDLKEHWILHRALREKFVCANCPELRSSLFEEVEAHCKSCFKNLVAVCAVVLVSASHQCKSCNLHFETSNEWKEHRLMCLPSPLSQTTIIRIADLVNNPSNPPVLPSVIDSVESSVLSAAPPAAPPAVVSSVPPTVSSSDTTSLTSLIPFTKATSTAVPVTPSLSPSNNTNPVLSKPASSKPKLVSVNLLTKYLSPNSTAATKSKKKHQVNQDVEIIDILSESSSRSSVAEDHGTKHPVLNTYNEPSTLEVDPFESYIPGNLQNKHRHKDASLSKSVVCYPPKRKNIKIKPKPTPKKVPTNTTNTQENTISIDSEKMSLAMTAVNPEFEFLLSELENLEKSTEPLKKSNNVRNIRQKSTSTEFNHETSLLSTPSTENSNIFEDASSSVVSETSSSSKKTEKETPLPFEVVLLQDEEADSLKSGTGSQISTAQVDINSNKSTNPENAQIDVPDQLTNNNSTSSDKDTPSETNTASIIEEYIEYIMMDEAAGDKSPAKAKDPVPNNPVPVEVTSKVEKVAPSRLRVRSLAELQEIKMHLCDYCGQSFDSRAKFEEHTQLHCGEALPADSSQHPPQPPYKELVQNIRPLTENSNEIDYREALTQNLLRRGVISANMDFVSPQLPLTIQGINASTSKANMTPVSPNIVIPDTKRKQPQGTSLLKNQQTYSNNTGVITPSSTSRFSTSGSNSIPRTGTIQLPERTGVSILQKRPSGAATRIQNLSHSQKSMTPNVIQHRGLPQVYASRQSVKISNSFGSLHRSTRNYTSGGSMTIQPGLENPSSSLTCETCHFTAKSLPEFSSHLIMHYVENSTEQKNHNHLQNHNQLIEETLMNSPNTSGGQTVCDVINAKSASASGDWQTPPRYVYACELCDFRTESKASIRLHEKNHSTVAIMRQNNLERLQNHRMIQQPFQTQQQQQQEPSQIHFVPTFSQLIETRKPNQPAPLTNHDKNGVSLYTRVSGDIFQCQLCNQFLFKSQEEFNRHLNRSHKETRKEVVIETADSSTVCFVCDYCETPQIFESEVNLRKHMNFLHNHVCQICSLRCTSRELLQIHVLSHKYENQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01391602;
90% Identity: iTF_01394727;
80% Identity: -