Basic Information

Insect: Synergus japonicus
Gene Symbol: -
Assembly: GCA_900474275.1
Location: UCOH01009291.1:337062-340619[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.095 9.7 7.3 0.8 1 20 105 124 105 128 0.94

2 13 0.011 1.1 10.3 4.6 2 23 269 291 269 291 0.91

3 13 0.00031 0.032 15.1 2.1 2 23 377 399 376 399 0.95

4 13 6.1 6.3e+02 1.6 7.8 3 23 480 501 479 501 0.96

5 13 0.091 9.4 7.3 0.8 1 23 550 573 550 573 0.95

6 13 0.00019 0.019 15.8 0.6 3 23 623 643 622 643 0.97

7 13 0.00049 0.051 14.5 0.2 2 23 665 687 664 687 0.93

8 13 0.0081 0.83 10.6 3.7 2 23 727 749 726 749 0.96

9 13 0.11 11 7.1 4.2 3 23 764 785 762 785 0.92

10 13 0.00027 0.028 15.3 0.1 2 23 829 851 829 851 0.93

11 13 0.068 7 7.7 0.9 1 23 930 952 930 952 0.98

12 13 0.0001 0.01 16.6 4.2 2 23 967 989 966 989 0.96

13 13 0.0045 0.47 11.4 0.4 1 23 1060 1083 1060 1083 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.095	9.7	7.3	0.8	1	20	105	124	105	128	0.94
2	13	0.011	1.1	10.3	4.6	2	23	269	291	269	291	0.91
3	13	0.00031	0.032	15.1	2.1	2	23	377	399	376	399	0.95
4	13	6.1	6.3e+02	1.6	7.8	3	23	480	501	479	501	0.96
5	13	0.091	9.4	7.3	0.8	1	23	550	573	550	573	0.95
6	13	0.00019	0.019	15.8	0.6	3	23	623	643	622	643	0.97
7	13	0.00049	0.051	14.5	0.2	2	23	665	687	664	687	0.93
8	13	0.0081	0.83	10.6	3.7	2	23	727	749	726	749	0.96
9	13	0.11	11	7.1	4.2	3	23	764	785	762	785	0.92
10	13	0.00027	0.028	15.3	0.1	2	23	829	851	829	851	0.93
11	13	0.068	7	7.7	0.9	1	23	930	952	930	952	0.98
12	13	0.0001	0.01	16.6	4.2	2	23	967	989	966	989	0.96
13	13	0.0045	0.47	11.4	0.4	1	23	1060	1083	1060	1083	0.98

Sequence Information

Coding Sequence: ATGACATCTACAGTGGCTCAAGAAATTCGGCTACCGGAACCAACTGATTCCGAACCAGCGGACAGCGATGGGTCCAGCAATGAGGACCGAGATGCGAGAAAACGTCTTCTTGGAGAAGGGGACTCTTCAGGACCCAAAAAGAGACGAAAACAAGCGACTCCTGTGAGATTTCCAACTTCCCTCCTGCTTGGTGATCATCCTGAGTCTgaggaagaagaggaagatgcAGATCCGGAAGGTAAGCCGAATTCGCCACGAGCGGAGGCACTTCAAGGCCATCCAACAACgaaagatgaaaatttaaatatagaattcCGGTGCCAGTACTGTAGTCAATTGTTCAATGGCAAATCAACTCTCGACCTCCACCTCGAGTGTGAGCACAATTTTGTAAACGCGTCCCACATACCTTCAGATAGCCAATCACCTCAGCCGGGAAGTCAAAGTCAAACGACTGTAGAAACGATCAATCAGCAATTTGATCAATCTCTTCGTTTACCTCATCTTCccaatatcgaaattaaaaacttaGGCCCTTCCTGGTTCTCTGAGCATATGCAATCTCAGAATCATAATCAAAATCAAACGCAGACTCAAACCCAACAACAGAGTGAGGAATGGTCGGCAAACAGTCACATGAGTCCGATTACATCAATGCCAAATCATCTAACAGGATTGCCAAATTTTCCTGGAGGACTTCAGCAGTATTTCCCTCTACCCCCAGGATTTACCCTTTCCGATTCTGGCCAGATCCATCGAACCACTTTGGGGCCAGCACCGGTGCGAATTTTTAATCCCGATGCTTACTGTGATCTCTGCAATAAGGAATTTTGTAACAAGTACTTTCTCAAAACGCACAAGGCTAACAAGCATGGTATTTATGTGGATCCTCCGAATCCAATGACAGTAGGGGAAAACAATGTTGGGGTTGGACCACTTTATCCGATAGGACAAATGCCTGGAAACAATATTAAAGTCGAACCCAATCAAAAGTTAGAAGGTGGTACTAGTATTCAAGTACCACAATTGCAACagatttcacaattaacacAGTTGCCACAAATACAACAGTTGCCACAATTGTCACAATCACCTCAGATACCACAACCACCCCCACCTCCAACCCTTCCCTGTGATATTTGCCATAAAAGGTTCCGAAGCGAGGAATCAGTTAGGAAGCACAAGCAAAAGGTGCACACTGCATCAGCATCAGAGGATCAGAAGAATCCTGTAGCTGATGAGGAGAGGGGAGTGCATCACCAAAGTCCTGGAGCAATGGAGATGCTCTTCAAACAAGAATATGGAGTTGAGCAAGAAGACAATGCATTCATGCCACCACCGAGACATCTTTCCCCTCAAGCTATTCAACAAGCCAAAGAATCCAACTTCAGTGCCGAACGACTTCGTAGACTGGGGGTTTTAAACCCAGACGCGTTTTGCGAAATTTGTTGTAAGGAGTATTGCAACAAGTTCACCTTACGTACCCATAAGATGAAGAGACATGGGATAGTGATCCAGGACAACGAAAAGCCACCACTCAATCCGGGATCAGCTGCCACCTGGCATCAAGTGCAAACCACCCCCTTGAACTTGATCATGAACGAGGCAGGAAGTGGATCCGAGTACAGTGATAGATCAACTGACGATCACGAATGCAAACCTTGTGGAATTCGTTTCCAAAACCTTGGACTATACGAGTCCCATCGTCAAAGAGTTCATGCTGATGAAATTTCTCCTAAGATCGAGTTTGATTCAGAATCTGTGGAACAACGAATTACGAGCAATGATGCCATTTCTGAAGATCTGCAAAAACTCCAAACAATGATTTTACAACTGAATGGTCTCGAAACTAACAGGATCTCTGCATGTTCGGTTTGTGGGAAAGAGTGTGATTCTAAAGTTAGTTTAAGAATTCATATGATGGAGCACGGTATTACGACAGAGGAGCCAGCATCACCATCTCAAGAAAAATCCTCAACACCCATCTCTACATACTGTACCTTGTGCGAAAAAGAATATCCAAACCAAGAAGCTCTGAGAAAACATATCTCAGAAGACCACAAACAATCATACGATTCGACTCTTGTACCGCATGTATCATCTATTTCTATGCCCTCAACTCCAACATCTAACCAGGCATCCGAACGCAAAAATTCATCCGTACCTCCCACATCCAGTTACTGCGATATTTGCAACAAGGAGCTGTGCAACAAGTACTTTATGAAAACCCACATGCAAAGGATGCATGGTATCGAAATTGAGAACGGGGCTCAGATCGGTGGAGTTATCTGCAACATCTGCAACAAGGAACTATGCAGTAAGTATTTCCTACGGGTCCACAAACACAATACCCATGGAATTGTCGACGAAGGCTCAAATATTGGAAACAAACAAGAAAACTTTGATCCACAAAGTACAGAGGATACAGCTTTAAAACCTGATATCGGTGATTTGAATCACAGATACTTCACTCACTTTACAGAAGTTTGTCCTGTCTGTAACAGAAGATTCAGAAGCATCAAATGGCTCAAAGCTCACTTATTGGGTGACCATGGAAAAATGGGGATTGAAAAGTGGAGGGAATTGGAACAACAGTACCAAGCAAATCAGAAGACCAACAACAGACTAGCAGGAACTTCAAGACCCAGTCAACTAAATACGCCTCTGAAGATACCTAATGGTTTCGAATCCTCTCAAACCAAGGTTCCCGATCTGACTGCAACCCTAGGGAACCAAGTTCTCTCAAACTTATTCGGGTCATCAGTCGAAGATCAACAATCTAAAAGTTACAGATGCTCCTACTGCAACTTTGCCACAACTGTCTTACCTTTCCTCTTCCTCCATGAAAGATCTCACATCAATCCCCAAGAACCTGCAACCGAAAATGACAAATTCTTACAGTGTCCTCTCTGTCCTCAAAGTTTTTCCCAGCCAGAACACTTTCACCATCATCTTCTAACTCGTCACCAGTTCCCTAACATACTGTCCCAATTTCCAGctcctatttttaataacctCAGGCTAGATGCCTTTGGAGAAAAGAACAGCGACACCAAAGATATAGAAATGGAACCCGAGGAGCAGAAGAATCCGAGTCCTCAAGCCCAGAACAATTTAAATGAACCCAGTAATCAAAAGCAAAATGATACAGCTGTACAGGTGACACCTCAAGGGGTCTATAAATGTGCCCAGTGTGGATACGCGACAGCAAATTTGAATCGCATCAAAAAACACATCAGAAAAGATCACAAGGCATTTGGAGAACCGACGGAAAGTGTTATTGCAGAGTTGAGCAAAATTCTCAAGGAGGTTGCCAATAAGCATAAAGTTCCTGCAAGTTATGCGATGCCCCAGGACTTGAATTCGAATCCGGAGAAGACGATAATGCAACCTTTTTTGATTGAAGAGCAGCAGTTCTCCCCAAGTCAGGATTGCGGCACAACTGGAGGGGAAGAATCTGGACCTTTGAAACGTTTTGCACCGGCCTTGGTCTACCTGCCAGTTAAGGCAAGAGTCAATGGCTCTCTCACAGCATCTTTCACCTTGAGTCCTGCGTAA
Protein Sequence: MTSTVAQEIRLPEPTDSEPADSDGSSNEDRDARKRLLGEGDSSGPKKRRKQATPVRFPTSLLLGDHPESEEEEEDADPEGKPNSPRAEALQGHPTTKDENLNIEFRCQYCSQLFNGKSTLDLHLECEHNFVNASHIPSDSQSPQPGSQSQTTVETINQQFDQSLRLPHLPNIEIKNLGPSWFSEHMQSQNHNQNQTQTQTQQQSEEWSANSHMSPITSMPNHLTGLPNFPGGLQQYFPLPPGFTLSDSGQIHRTTLGPAPVRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDPPNPMTVGENNVGVGPLYPIGQMPGNNIKVEPNQKLEGGTSIQVPQLQQISQLTQLPQIQQLPQLSQSPQIPQPPPPPTLPCDICHKRFRSEESVRKHKQKVHTASASEDQKNPVADEERGVHHQSPGAMEMLFKQEYGVEQEDNAFMPPPRHLSPQAIQQAKESNFSAERLRRLGVLNPDAFCEICCKEYCNKFTLRTHKMKRHGIVIQDNEKPPLNPGSAATWHQVQTTPLNLIMNEAGSGSEYSDRSTDDHECKPCGIRFQNLGLYESHRQRVHADEISPKIEFDSESVEQRITSNDAISEDLQKLQTMILQLNGLETNRISACSVCGKECDSKVSLRIHMMEHGITTEEPASPSQEKSSTPISTYCTLCEKEYPNQEALRKHISEDHKQSYDSTLVPHVSSISMPSTPTSNQASERKNSSVPPTSSYCDICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVDEGSNIGNKQENFDPQSTEDTALKPDIGDLNHRYFTHFTEVCPVCNRRFRSIKWLKAHLLGDHGKMGIEKWRELEQQYQANQKTNNRLAGTSRPSQLNTPLKIPNGFESSQTKVPDLTATLGNQVLSNLFGSSVEDQQSKSYRCSYCNFATTVLPFLFLHERSHINPQEPATENDKFLQCPLCPQSFSQPEHFHHHLLTRHQFPNILSQFPAPIFNNLRLDAFGEKNSDTKDIEMEPEEQKNPSPQAQNNLNEPSNQKQNDTAVQVTPQGVYKCAQCGYATANLNRIKKHIRKDHKAFGEPTESVIAELSKILKEVANKHKVPASYAMPQDLNSNPEKTIMQPFLIEEQQFSPSQDCGTTGGEESGPLKRFAPALVYLPVKARVNGSLTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00011446;
90% Identity: iTF_01389736;
80% Identity: -