Basic Information

Insect: Synergus japonicus
Gene Symbol: ZNF236
Assembly: GCA_900474275.1
Location: UCOH01005711.1:81000-87888[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.0001 0.01 16.6 2.9 2 23 53 74 53 74 0.98

2 24 6e-07 6.1e-05 23.6 1.3 1 23 95 117 95 117 0.99

3 24 4.7e-06 0.00048 20.8 1.8 1 23 123 145 123 145 0.98

4 24 0.0002 0.02 15.7 3.4 1 23 151 174 151 174 0.96

5 24 0.00061 0.063 14.2 2.5 1 23 183 206 183 206 0.97

6 24 9.9e-07 0.0001 23.0 1.5 1 23 316 338 316 338 0.98

7 24 0.00099 0.1 13.5 1.4 1 23 344 366 344 366 0.98

8 24 0.00026 0.027 15.3 0.2 1 23 372 394 372 394 0.97

9 24 0.00011 0.011 16.5 4.1 1 21 398 418 398 420 0.95

10 24 0.0063 0.65 11.0 9.1 1 23 475 497 475 497 0.98

11 24 6.9e-07 7.1e-05 23.5 1.9 1 23 503 525 503 525 0.99

12 24 0.00056 0.058 14.3 5.2 1 23 531 553 531 553 0.97

13 24 9.8e-05 0.01 16.7 7.4 1 23 559 581 559 581 0.98

14 24 0.007 0.72 10.8 0.1 1 23 903 925 903 925 0.95

15 24 0.0083 0.85 10.6 2.0 2 23 971 992 970 992 0.97

16 24 0.00043 0.045 14.6 2.2 1 23 998 1020 998 1020 0.98

17 24 0.0033 0.34 11.9 0.1 1 23 1026 1048 1026 1048 0.98

18 24 5.8e-06 0.00059 20.5 1.2 3 23 1119 1139 1118 1139 0.92

19 24 0.26 27 5.9 5.6 1 23 1145 1167 1145 1167 0.97

20 24 3.3e-05 0.0034 18.2 2.3 1 23 1173 1195 1173 1195 0.98

21 24 0.00011 0.011 16.6 1.8 1 23 1201 1223 1201 1223 0.98

22 24 2.8e-05 0.0029 18.4 1.3 2 23 1439 1460 1439 1460 0.97

23 24 2.4e-05 0.0024 18.6 2.3 1 23 1466 1488 1466 1488 0.98

24 24 2.6e-06 0.00027 21.6 2.8 1 23 1494 1517 1494 1517 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.0001	0.01	16.6	2.9	2	23	53	74	53	74	0.98
2	24	6e-07	6.1e-05	23.6	1.3	1	23	95	117	95	117	0.99
3	24	4.7e-06	0.00048	20.8	1.8	1	23	123	145	123	145	0.98
4	24	0.0002	0.02	15.7	3.4	1	23	151	174	151	174	0.96
5	24	0.00061	0.063	14.2	2.5	1	23	183	206	183	206	0.97
6	24	9.9e-07	0.0001	23.0	1.5	1	23	316	338	316	338	0.98
7	24	0.00099	0.1	13.5	1.4	1	23	344	366	344	366	0.98
8	24	0.00026	0.027	15.3	0.2	1	23	372	394	372	394	0.97
9	24	0.00011	0.011	16.5	4.1	1	21	398	418	398	420	0.95
10	24	0.0063	0.65	11.0	9.1	1	23	475	497	475	497	0.98
11	24	6.9e-07	7.1e-05	23.5	1.9	1	23	503	525	503	525	0.99
12	24	0.00056	0.058	14.3	5.2	1	23	531	553	531	553	0.97
13	24	9.8e-05	0.01	16.7	7.4	1	23	559	581	559	581	0.98
14	24	0.007	0.72	10.8	0.1	1	23	903	925	903	925	0.95
15	24	0.0083	0.85	10.6	2.0	2	23	971	992	970	992	0.97
16	24	0.00043	0.045	14.6	2.2	1	23	998	1020	998	1020	0.98
17	24	0.0033	0.34	11.9	0.1	1	23	1026	1048	1026	1048	0.98
18	24	5.8e-06	0.00059	20.5	1.2	3	23	1119	1139	1118	1139	0.92
19	24	0.26	27	5.9	5.6	1	23	1145	1167	1145	1167	0.97
20	24	3.3e-05	0.0034	18.2	2.3	1	23	1173	1195	1173	1195	0.98
21	24	0.00011	0.011	16.6	1.8	1	23	1201	1223	1201	1223	0.98
22	24	2.8e-05	0.0029	18.4	1.3	2	23	1439	1460	1439	1460	0.97
23	24	2.4e-05	0.0024	18.6	2.3	1	23	1466	1488	1466	1488	0.98
24	24	2.6e-06	0.00027	21.6	2.8	1	23	1494	1517	1494	1517	0.96

Sequence Information

Coding Sequence: ATGACACTCGCTGCAGATTGTCTGAATTTTGCTCTTTTGAACATCTGCTCTCGAGTTTTTCATTTCGGCCTAGGCCTTGGTGCCCAATATTACAAggcTCAACTCGACGCTCACCTAAAACTTCACAACGAGAAATGGACGACCGAGGATGTCAGGAAGTGCAAGCTTTGTCACAAACAATTCACTCAGCCAGCTTTGTACAGACAACACATTCGAGAACACTACAGgttacaaaCGAAGCTAGTGAAGCAGACGAAGAGAGGGACAAGGCACAAGACAATGTACAAGTGCAAAATATGTCTGAAGTCTTTCCAAAAACCAAGTCAGCTGATGAGACATATCAGAGTTCACACAGGAGAAAAACCATTCAAGtGTACAGTTTGCAGTAGAAGATTCACACAAAAAGGTTCGCTTCAGATTCATATGTCGCAACACGATGGAGTCAGGCCACACACTTGTAATTTTTGCAGTGCGAGATTTAGTCAAAAGGGAAACCTAAACGCGCACATCCACAGGGTGCACAATCTAACAGATGAAAGTAAGACATATGCATGTACATACTGTTCTTGTGCCTTCAAAAAGTTAGGAAGCTTAAATGCACATTTGAAGAGAAGACACGCATTTCCTATTGAGgAAGAGAATCCAAAGTGTGATAGTTCGACCTCAGACGCAGATATGCAAGCAACTGTGGAAAATGTCATGTCACAGCTTGCTTCTCTTGAATCTGAGGTTCAAAATCCAGCAGATTCAACTGAAAAGGATAATAGTGATATCTTGCAACAAGCTTTGGAAAATAGCGGACTTCCGAGCAAAGAAGAACAAGCtgaagcGGCTAAAAAATCTAAGGGACGAACAATGATGGTGAcattattagatagaaatgcAGATGGCGATGGAAGaaaatatgtCACTATTAAGCAGCGACATGTTGGCGACATGCTTTGGTTTACCTGCACCTTTTGTCAGAAAGAGTTCAAAAAGCCTTCGGATCTCATAAGACATTTACGAATTCATACGCAGGAGAAACCATTTCGGTGTTCGTACTGTAGTCGCACCTTCGCTTTAAAATCAACAATGGTGGGGCATGAACGGACACATTCTGCCACAAAGAAATTTCCATGTGGATCATGCGAAAATGTATTTACAACTCGTAGCAGTCTTACCGCTCACGCAAgGTTGCATACAAGGGCCTTTACATGCAACGTTTGCAAGAGGTCTTTTAGTGGAAGTTCTTTGTTAAAAAATCACATGAAGTGCCACTCCAAACCTAAGACGAAAATATCTCCAGAAGTAGAAAGTCTCGTTCCCCAAATAGTTTTGAAGGAACCATTACTTATCAGCGATGCGGGGAATAAAATTAGTGTAGCTCAAGTAAAATCGAAGAAACAACAAGTCTACGAAGGTGGAGATTCAGCTAGACCCCATAAATGTACAATGTGTAGTGCTGCCTTTAGAAAAACGAGTCACTTGAAGCAACATCATCGAAGACACACCGGAGAAAAACCTTACAAATGCCCGAAATGTGATAGGAGATTCACTTCGAACAGTGTTCTGAAGTCGCATTTGCAAACTCACGAGGATGCGAGACCGCACAGTTGTACAGTCTGCAATGCCAAATTTACAACGCATAGTAGCATGAAGAGACACCTAATTACTCACAGCAATAAAAGGCCTTTCATGTGTCCCTATTGTCATAAAACCTTTAAAACTTCCGTCAACTGCAAAAAGCACATGAAAATTCACAAGGCCGAATTGGCTCTACAGCAAGTGGAGAAGCAGAAAATGCAGTCGAAAATTATTATGGTTATGGACAGTCCGAAAGAAAGTCcagagaataaaaaagaagattcaGTACCTGAAACTCTTTCTTTAGGGGATGAAATTACGGTGCCATTTCAGACTCAGTCTGTTGATTTTACAGATAATTTTTCTGGTCAGTATCAACCCATTGTGGTGGAGAACAAAGATAAAATCCACATTCCAATCTCTGACACAGAAAGTGTTCATCaAAACGTCCTGAGTACTGGTAGTGTAAATTTAGGAATTACTCAAACATTACATGCCGATGAAACGGGCACAATTACTCTGCCAAATTATTCCGGAGAAGACACACTTAGTGCGGAGAATATTCGAGAACTAGAAGAAACTTTGAACCAGCAGCTCATCAATATCGGAATGAACCTCGGATTAGAAAACTCAATATCTAAACCAATAATAGAAACAAATTCTTCTCTCGACTCGAGGAATCAGCCCGTCCTGAGTATTATTTATGATAGTGATAAAGCCTTAGAATCCGTTACGAATAATGAAGTCAATACTCATATATTTACACCTCAATTCGACACATTCGACATAAATCAGATCTCCTTGCAGacAAATGGAGACATGGATGTTGAAATTGAATCGAGTACAACGACTAGCATGGCAAATATTTTGCCCAGATCTATGCAAGAAGAGCAGCATTTGTCCATTCCAGTGACAACTGGTTCTGTGGAAATGACTCAAAAACCATTACAGCATTTAACGATTGTCAGTCCAATGCAAACTCAGCTTGAAGTTTCCAAGCCGGTTCAAACATTCAgaaagtattcaaaaattatcgCCAAGGCTGACACAACTAATGGGACTGAGGTTCAGAGTTTCAACAATAATTCAAAAGTGGAAGAAACGAATATCAGCATTTCAGGAGATATGGATCAATTTATGTTTTCgTGTACAATATGTGATAAACTATTCGAGAGAGAATTGGATTTAATATATCATGTTGAAGAACACATCGCTTCAGCAACAAAAGAAactcaaaccactaaaaataatttaattgaagcTACGGCTTTAATGCATATTAATTCACCAGCGAAAGATCCTGAACCTAATCAAAATGATTTAATCGAATCGAATCATTTACTCCAGTGTCACATGTGTAGGAAAAACGGTTTCACAGCTTCTGAATTAAAGGAACATTTAACAACTCATCAGGGTGAGAAGGAGTTTGAATGCATGGAATGTTCCCTAAAATTTTGCACAAATGGCGGATTGAGTAGACATCTAAAAATGCACGCTGCTAAAAACCAATATAAATGTATTATATGCGATAAAGTATTACCGAATAAAGTACAAATGGAAATTCACCTTCAAACACACGATGAATTATTCACTGGGGTTGTGGAGGCCGATAGTTCTGAAAAAGAATCACTCcctatagaaataaaatttgaaaacgttTCTAATGATCAATGTACTCTGAATACGGACGTGAAAATATCTGAGCAAATTTTGTTAGACTCTGCAGATATCATGGAAAGGCTTAAGAATTTGAAGGGCAAAGAAGAGAAGAAACCAGAGAAGAATAAATGCATATTCTGTCCAAAGACTTTCCGAAAACCTAGTGATCTCACAAGACACATTCGAACTCACACAGGAGAAAGACCGTATCAATGTCAATTTTGCAGCAAGAGCTTCGCAGTCAAATGTACACTTGATTGTCACATGCAAATTCATAGTGGCAAGAAAACTTTCAGTTGTCATGTTTGCAATAGTTTTTTCGCAACGAAGGGAAGTTTGAAGGTCCACATGAGGTTGCACACAggCTCTAAACCATTCAGATGTCCAGTTTGCGACTTGCGATTCCGAACTTCAGGTCACCGAAAAGTGCACCTGTTGTCTCATGTTAAAGAACAGAAAGAGAATAAACCTCGGAAACCAAAGCAAAGAAAAACTGCAGCTATCGCAAGTGTCGTCGCCGATGTTGAAAACGCAATCGAGTCCATCAACGCCGAAAATGCGATTCAAGATCCTCCACAGGATGAAATAGAGTTTTCCAACTTAGACACGGTTACTATTGATGCTTCTGCTCTCACCGACCAAATCACTTTCAATCCTGATGGAACcgttttaaacaataattctGTCCTTTCTGTCAGCGAAAGCAATCAACTTGTAGCCAATTTGCACTTCTTACTTGCCAATGGTCTCATGACAATCCAACCTGACGGTTACGTAACATTCCAGGACTCCGTTCTTCCTGGATTAGCTAATTTACAATTGGAGAATTCTCAGGGCGATATTCTTAACTCAACGGACTCCGAGAATATTATAATCACCCAGGAATCGAATTCTGTTGATTTGGAACAATCAGGGTTTTTGAACAACTGCTCAGCAGTTGTACAAGTTGGAGACAACAGTATGGTTTCGACTTCTAACGTCTCTAATTCTAGtatttctaattctaatatttcgAATTCTGGTATCGAGAAttgcaatattcaaaattccactgGACCTAAAACTTCGAAGAGTGGAACACCGAGGCGAGAATGTGACATTTGTGGAAAAGTATTTAGGAAACCTTGTCAGGTCGAGAGACACAAAAGGATCCACACTGGCGAGAGGCCTTTTAAATGCGAGCTTTGCGACAAAGCCTTCGCGCAGAAAAATACTCTCATAATGCACCAAAAACACCATACGGGAGATCGTCCTCATAATTGTCCGTACTGTACTTATTCTTTTTCCCAGAAAGGGAATTTACAAACACATCTTAAGCGAGTTCATCAAGACGAAGCTCccgaaacaaaaaaattgtggaGGGGACAGCCATCGAAATTTATAGAGGAAAACACAGTTGATACCAGAATTCTAGGTCTTGATGACATCTCGCTTGTTGAGTTTTTAAAGTAA
Protein Sequence: MTLAADCLNFALLNICSRVFHFGLGLGAQYYKAQLDAHLKLHNEKWTTEDVRKCKLCHKQFTQPALYRQHIREHYRLQTKLVKQTKRGTRHKTMYKCKICLKSFQKPSQLMRHIRVHTGEKPFKCTVCSRRFTQKGSLQIHMSQHDGVRPHTCNFCSARFSQKGNLNAHIHRVHNLTDESKTYACTYCSCAFKKLGSLNAHLKRRHAFPIEEENPKCDSSTSDADMQATVENVMSQLASLESEVQNPADSTEKDNSDILQQALENSGLPSKEEQAEAAKKSKGRTMMVTLLDRNADGDGRKYVTIKQRHVGDMLWFTCTFCQKEFKKPSDLIRHLRIHTQEKPFRCSYCSRTFALKSTMVGHERTHSATKKFPCGSCENVFTTRSSLTAHARLHTRAFTCNVCKRSFSGSSLLKNHMKCHSKPKTKISPEVESLVPQIVLKEPLLISDAGNKISVAQVKSKKQQVYEGGDSARPHKCTMCSAAFRKTSHLKQHHRRHTGEKPYKCPKCDRRFTSNSVLKSHLQTHEDARPHSCTVCNAKFTTHSSMKRHLITHSNKRPFMCPYCHKTFKTSVNCKKHMKIHKAELALQQVEKQKMQSKIIMVMDSPKESPENKKEDSVPETLSLGDEITVPFQTQSVDFTDNFSGQYQPIVVENKDKIHIPISDTESVHQNVLSTGSVNLGITQTLHADETGTITLPNYSGEDTLSAENIRELEETLNQQLINIGMNLGLENSISKPIIETNSSLDSRNQPVLSIIYDSDKALESVTNNEVNTHIFTPQFDTFDINQISLQTNGDMDVEIESSTTTSMANILPRSMQEEQHLSIPVTTGSVEMTQKPLQHLTIVSPMQTQLEVSKPVQTFRKYSKIIAKADTTNGTEVQSFNNNSKVEETNISISGDMDQFMFSCTICDKLFERELDLIYHVEEHIASATKETQTTKNNLIEATALMHINSPAKDPEPNQNDLIESNHLLQCHMCRKNGFTASELKEHLTTHQGEKEFECMECSLKFCTNGGLSRHLKMHAAKNQYKCIICDKVLPNKVQMEIHLQTHDELFTGVVEADSSEKESLPIEIKFENVSNDQCTLNTDVKISEQILLDSADIMERLKNLKGKEEKKPEKNKCIFCPKTFRKPSDLTRHIRTHTGERPYQCQFCSKSFAVKCTLDCHMQIHSGKKTFSCHVCNSFFATKGSLKVHMRLHTGSKPFRCPVCDLRFRTSGHRKVHLLSHVKEQKENKPRKPKQRKTAAIASVVADVENAIESINAENAIQDPPQDEIEFSNLDTVTIDASALTDQITFNPDGTVLNNNSVLSVSESNQLVANLHFLLANGLMTIQPDGYVTFQDSVLPGLANLQLENSQGDILNSTDSENIIITQESNSVDLEQSGFLNNCSAVVQVGDNSMVSTSNVSNSSISNSNISNSGIENCNIQNSTGPKTSKSGTPRRECDICGKVFRKPCQVERHKRIHTGERPFKCELCDKAFAQKNTLIMHQKHHTGDRPHNCPYCTYSFSQKGNLQTHLKRVHQDEAPETKKLWRGQPSKFIEENTVDTRILGLDDISLVEFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01391385;
90% Identity: iTF_01390513;
80% Identity: -