Basic Information

Insect: Synergus japonicus
Gene Symbol: -
Assembly: GCA_900474275.1
Location: UCOH01000024.1:68574-73736[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 3.4 3.5e+02 2.4 5.4 1 21 151 171 151 172 0.95

2 29 0.0019 0.19 12.6 2.2 1 23 180 202 180 202 0.98

3 29 6.4e-05 0.0066 17.3 2.7 1 23 217 239 217 239 0.99

4 29 0.0087 0.89 10.6 0.2 2 20 254 272 253 274 0.94

5 29 2e-05 0.0021 18.8 0.6 2 23 283 304 282 304 0.97

6 29 0.72 74 4.5 0.9 2 23 309 330 308 330 0.84

7 29 9.9e-06 0.001 19.8 1.2 2 23 337 358 336 358 0.96

8 29 0.00042 0.044 14.7 1.1 1 23 367 390 367 390 0.97

9 29 1.1 1.1e+02 3.9 5.2 1 23 401 423 401 423 0.98

10 29 0.0059 0.61 11.1 1.5 1 23 520 542 520 542 0.98

11 29 0.00034 0.035 15.0 0.9 2 23 552 574 551 574 0.94

12 29 0.00012 0.013 16.4 6.3 1 23 580 602 580 602 0.97

13 29 0.14 15 6.7 0.2 1 23 606 628 606 628 0.97

14 29 7.1e-05 0.0073 17.1 3.0 2 23 635 656 634 656 0.97

15 29 8.9e-05 0.0091 16.8 0.1 1 23 662 684 662 684 0.98

16 29 0.12 12 7.0 0.8 1 23 690 712 690 712 0.97

17 29 3.3e-05 0.0034 18.1 0.2 2 23 719 740 718 740 0.96

18 29 1.2e-06 0.00013 22.7 0.6 1 23 746 768 746 768 0.98

19 29 2.2e-07 2.3e-05 25.0 1.9 1 23 774 796 774 796 0.99

20 29 0.049 5 8.2 0.8 1 23 916 938 916 938 0.87

21 29 1e-06 0.00011 22.9 0.7 1 23 944 966 944 966 0.98

22 29 7.2e-07 7.4e-05 23.4 0.4 1 23 972 994 972 994 0.98

23 29 0.0017 0.18 12.7 2.8 3 23 1002 1023 1001 1023 0.96

24 29 0.00017 0.017 16.0 6.3 1 23 1028 1050 1028 1050 0.97

25 29 3.3e-05 0.0034 18.2 0.3 2 23 1060 1081 1059 1081 0.96

26 29 4.7e-06 0.00049 20.8 1.0 1 23 1087 1109 1087 1109 0.97

27 29 8.3e-05 0.0086 16.9 1.3 2 23 1116 1137 1115 1137 0.97

28 29 4e-06 0.00041 21.1 3.5 1 23 1143 1165 1143 1165 0.98

29 29 9.3e-06 0.00096 19.9 2.6 1 23 1171 1193 1171 1193 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	3.4	3.5e+02	2.4	5.4	1	21	151	171	151	172	0.95
2	29	0.0019	0.19	12.6	2.2	1	23	180	202	180	202	0.98
3	29	6.4e-05	0.0066	17.3	2.7	1	23	217	239	217	239	0.99
4	29	0.0087	0.89	10.6	0.2	2	20	254	272	253	274	0.94
5	29	2e-05	0.0021	18.8	0.6	2	23	283	304	282	304	0.97
6	29	0.72	74	4.5	0.9	2	23	309	330	308	330	0.84
7	29	9.9e-06	0.001	19.8	1.2	2	23	337	358	336	358	0.96
8	29	0.00042	0.044	14.7	1.1	1	23	367	390	367	390	0.97
9	29	1.1	1.1e+02	3.9	5.2	1	23	401	423	401	423	0.98
10	29	0.0059	0.61	11.1	1.5	1	23	520	542	520	542	0.98
11	29	0.00034	0.035	15.0	0.9	2	23	552	574	551	574	0.94
12	29	0.00012	0.013	16.4	6.3	1	23	580	602	580	602	0.97
13	29	0.14	15	6.7	0.2	1	23	606	628	606	628	0.97
14	29	7.1e-05	0.0073	17.1	3.0	2	23	635	656	634	656	0.97
15	29	8.9e-05	0.0091	16.8	0.1	1	23	662	684	662	684	0.98
16	29	0.12	12	7.0	0.8	1	23	690	712	690	712	0.97
17	29	3.3e-05	0.0034	18.1	0.2	2	23	719	740	718	740	0.96
18	29	1.2e-06	0.00013	22.7	0.6	1	23	746	768	746	768	0.98
19	29	2.2e-07	2.3e-05	25.0	1.9	1	23	774	796	774	796	0.99
20	29	0.049	5	8.2	0.8	1	23	916	938	916	938	0.87
21	29	1e-06	0.00011	22.9	0.7	1	23	944	966	944	966	0.98
22	29	7.2e-07	7.4e-05	23.4	0.4	1	23	972	994	972	994	0.98
23	29	0.0017	0.18	12.7	2.8	3	23	1002	1023	1001	1023	0.96
24	29	0.00017	0.017	16.0	6.3	1	23	1028	1050	1028	1050	0.97
25	29	3.3e-05	0.0034	18.2	0.3	2	23	1060	1081	1059	1081	0.96
26	29	4.7e-06	0.00049	20.8	1.0	1	23	1087	1109	1087	1109	0.97
27	29	8.3e-05	0.0086	16.9	1.3	2	23	1116	1137	1115	1137	0.97
28	29	4e-06	0.00041	21.1	3.5	1	23	1143	1165	1143	1165	0.98
29	29	9.3e-06	0.00096	19.9	2.6	1	23	1171	1193	1171	1193	0.98

Sequence Information

Coding Sequence: ATGAaGGAAGGTACGAAGCGGAAAAGAGGACGTCCCGTtgcagaaaagaaaaaaagcagcTCAAgagggaaattaaaaaaaaagacttctAAAATCGAGAGTAATAAAGCACATAATACTAAAGAATCAAAAGTACTTGTAGAAGCAGTCAAAGAAAgtctagaaattaaaaagcagCCTGAGGTGTCACCAATTTTGAAACGAAAAAGAGGACGTCCTCCCAAAAATTCCCAAATTACAAGTAACTCAATTGTCAAAAGTACTAGAGGTCGACCACGTAAATCTTTACCAGACCAAAAAGCGAAATTAAATCCTATAGCGAAAGTTCCAGAGAATGTTAAAcctctgaaaaattttgaggaatatgGTTCGACTTCGGATGATCCATCCGATGACAGTGATTTCTTACCTCCCGTTCCTACCCAGAAATCTGCTAAAGAAAAGATACAATATCGCTGTCGgttttgtaatttcaaaacttgCTATAAAAACTCTTATCTAAATCATATGGAACGATATAATGAGACTCCTGGTAAATTTGAATGTGAATTGTGCGATGAGTGTTTCCCTTTAAAAAGAGAATTGCACATTCATTGGAAAAACCACAGGCCAACCTTTTTTCCTGATGGCCCAGATAAGCCAGGATTCTATAAATGTGATGAATGCAATGAAAGATTTACAAAGAGATTTCAGCTTGGCAGACACAGACAATCACATCGACTAAATTTTGTTCCAGAACGAGAACCGAGGAAAATGAAACGTTGTAGAATCTGcgctaaaagattttattcagAAGTTGCTTTGTTCAAGCATATGGAAGAAGCCATTGAAGAACATCAACCTGTGGAATGTGatctttgcaaaaaaatattcaggtCGAAGCGAAGTCTCATAATGCATCTCCGAATTCATATCGGCCCCCTTATTTGTCATATTTGCGGATCGAGAAAGTACTCTGATGCTTCTATGAAGGTTCATATTCGACGACATAATAAGGAATACTATATTCATTGTGACGTTTGCAATAAAGGGTTCTACAACAAAAGCGAGCTGAGACTTCACATGATCAGTCATACCAATCGGGAAACCAATCGTCCATTTGTCTGCCAAATTTGTGGACGTTCTTATCGCTCTGGTTGTTATCTCAAGTTACACGTGAAAATCGCACATGTCGAGGCTGAGGAATATAAACGCAAGCGGTACAAATGCGATATCTGCGATTTCGAAACTCATCTTTTAAAGTgcttaaaaatacataagcAAACGCACACTGGAGAGAATTTGATATCTTGCCAATTGTGTAACAAAATGATTAATAAGAGGTCTGTCGAGGTGGCAGTGGATTCATCAGGAAACGATCTCAAGTTGGAGACGTATGAAATTGAAGACGAAACAATTGAGGTGCCCCACGAGCAGATTATAGAATATACACCCGACGAAACTGGAGAGATCCAAACAGAACTCAAAATAAACACActtttaaatgataataacATTGAGGAACTTTTGCAATCAAGTTCAATTGAGGCAGATGATCAGgctaaaattagtaaaatatatGAGTGTGATGTCTGtggaagaaaaatgaagaagaaggCTTTGTTCATGAAACACAAGCTGCGCCATGAGAGGAAACTTTCTGGGGAAAGTACACGCTGTGATAAATGTGAAAAGGATTTTAGTAACGAGGAGAAACTGCGAAAGCATGAGATCAAAGCTCATCAAAATGAAAAACCGCATCAGTGCAGTCTTTGTGGAAAGTGTTTCAAAAccgaagaatttttaagaacacATCTGAAACAACATAACAAGCGATTCGTGTGTGACGTTTGCGGAATCTCGAAGGTTTCAGGTTACGATCTTAGGCTTCATAAAAAGAAACACAATCAGGAATTTGTTACACACTGTAATATCTGTAAGAAAGGCTTTTACACTAATCAAACTTTGGAACGGCATCTATTAACGCACACGGGTGAAAAACCATTTCCTTGTAGGATTTGTAATACTGCTTATGCCAGTGCAGCATATTTAAACATgcacatgaaatctcatgGAGAGCGACAAAAACACAAGTGCAATCTTTGCGACTTTGAAAGCTACTGGAAAGCAGCATTAAAGGTCCACCTTAGAATTCACACTGGCGAAAACCAAATTTCATGTGATATTTGTGGGAAATCGGTTTCTAGCAAAACTTATCTTCAGATTCATAATCGAATACATTCGGGAGAAAAACCACATGTTTGCGAAGTTTGCGGCAAGGCTTTTAGCGTtcgaaaatatctaattgttCACCTCAGAACACACACTGGTGAACGTCCCTATGAGTGTAAAGTTTGTCAAAAAAGGTTCACACAACAAGGATCTCTTAATTCGCATATGAAGTCGCATAACGAGTCGCGAATCCATGAAAATCTGCAATTGGAGAAAGAAGAATGTCGGACTGACCAGGTTTTCCCTTTTATTTGCAGATGGCACCAAATCATTGCAAATGTGTTGGACGAAAGTATGCAAGCGCCCAAGCAGGAATATAAGGAATCTCtggacaataataataaatcgcTGGATAATGACCTCGAATTCAAATCCTGGTCCGAAGATATAAAGGCTGAATGTGATCTGAAAATGATCCCCAAGAATAAGGATCTGGAAATgtctatatttgaaaatgattccTTACACAGAGAGCAACTTAACGGTGAAGctaaaaatagaaatcatGAAAGCTACGACTCTGTAAAAAAAGTCTATCAGTGCAGAATATGTAAGAAACAGTTCAAAGCTAAGACCCTATTCGATGGACATTTAGTGGCGCACAGCGACGTTCGTCCATTTGAATGCGAAATTTGTGGCAAGCGCTTCAAACGTACAAATACACTAGCAGTTCATAGAAGAATTCACACACGAGAGCGAAATTTCGTCTGCGATGTCTGTGGTCGTGCTTTTGTGCAAGCTTCTCAATTAGCAACTCACCACAGAAGACACTTCGAAAAATACACTAGGCATTGTAGTATATGCAACAAAGGCTTCTTCACAAATGCTGAACTTCATGGTCATATGAATGTCAAGCATGGTGCTAAGGAACACGTTTGTCATGTATGCAATAAGTCTTTTCCAAACAATCATACCCTGGTTCGTCATTCGAAAAGTCACGATCCAAACTTCAAACCCGATTTTTGGGTTTGTCAATTTTGTGGAAAAACCTTCGCCTACAAAAACTCTCTTGTGGTTCACGTCAAATCCCACACAGGAGAAAATAAATACGACTGCCATCTTTGCGGTAAGTCTGTTTCTTCCAAAGGATCTCTACAAGATCATCTACGACTACATGGAGGAGAAAAGTCTCTGGTGTGCGACGTTTGTGGCAAAGCTTTTCATAAAAGGACTACATTAGTGGTTCACAAAAGAACACATACTGGAGAAAAACCATATACCTGTGATACTTGTGGAAAATCTTTCACCCAACACTCTACTTTAGTTATTCATAAGCGATATCATACTGGCCAGCGACCTTATGAATGCAATTTCTGCAACAAGTGTTTCGTCTCGAGAGCTTTACTTAATGTTCACAAAAGAGTACATGCTGTAGACAATGTAGATGTCACAGTTTTATAG
Protein Sequence: MKEGTKRKRGRPVAEKKKSSSRGKLKKKTSKIESNKAHNTKESKVLVEAVKESLEIKKQPEVSPILKRKRGRPPKNSQITSNSIVKSTRGRPRKSLPDQKAKLNPIAKVPENVKPLKNFEEYGSTSDDPSDDSDFLPPVPTQKSAKEKIQYRCRFCNFKTCYKNSYLNHMERYNETPGKFECELCDECFPLKRELHIHWKNHRPTFFPDGPDKPGFYKCDECNERFTKRFQLGRHRQSHRLNFVPEREPRKMKRCRICAKRFYSEVALFKHMEEAIEEHQPVECDLCKKIFRSKRSLIMHLRIHIGPLICHICGSRKYSDASMKVHIRRHNKEYYIHCDVCNKGFYNKSELRLHMISHTNRETNRPFVCQICGRSYRSGCYLKLHVKIAHVEAEEYKRKRYKCDICDFETHLLKCLKIHKQTHTGENLISCQLCNKMINKRSVEVAVDSSGNDLKLETYEIEDETIEVPHEQIIEYTPDETGEIQTELKINTLLNDNNIEELLQSSSIEADDQAKISKIYECDVCGRKMKKKALFMKHKLRHERKLSGESTRCDKCEKDFSNEEKLRKHEIKAHQNEKPHQCSLCGKCFKTEEFLRTHLKQHNKRFVCDVCGISKVSGYDLRLHKKKHNQEFVTHCNICKKGFYTNQTLERHLLTHTGEKPFPCRICNTAYASAAYLNMHMKSHGERQKHKCNLCDFESYWKAALKVHLRIHTGENQISCDICGKSVSSKTYLQIHNRIHSGEKPHVCEVCGKAFSVRKYLIVHLRTHTGERPYECKVCQKRFTQQGSLNSHMKSHNESRIHENLQLEKEECRTDQVFPFICRWHQIIANVLDESMQAPKQEYKESLDNNNKSLDNDLEFKSWSEDIKAECDLKMIPKNKDLEMSIFENDSLHREQLNGEAKNRNHESYDSVKKVYQCRICKKQFKAKTLFDGHLVAHSDVRPFECEICGKRFKRTNTLAVHRRIHTRERNFVCDVCGRAFVQASQLATHHRRHFEKYTRHCSICNKGFFTNAELHGHMNVKHGAKEHVCHVCNKSFPNNHTLVRHSKSHDPNFKPDFWVCQFCGKTFAYKNSLVVHVKSHTGENKYDCHLCGKSVSSKGSLQDHLRLHGGEKSLVCDVCGKAFHKRTTLVVHKRTHTGEKPYTCDTCGKSFTQHSTLVIHKRYHTGQRPYECNFCNKCFVSRALLNVHKRVHAVDNVDVTVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -