Basic Information

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.087 1.1e+02 3.4 0.3 5 18 70 83 68 86 0.88

2 4 0.24 3e+02 2.0 0.0 2 19 86 103 85 111 0.69

3 4 0.011 14 6.3 0.0 27 45 142 160 139 161 0.91

4 4 7.6e-05 0.097 13.2 0.0 2 45 167 214 166 215 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.087	1.1e+02	3.4	0.3	5	18	70	83	68	86	0.88
2	4	0.24	3e+02	2.0	0.0	2	19	86	103	85	111	0.69
3	4	0.011	14	6.3	0.0	27	45	142	160	139	161	0.91
4	4	7.6e-05	0.097	13.2	0.0	2	45	167	214	166	215	0.93

Coding Sequence: ATGTCAcaagaaaaagtgaaaaaagtaaataaatcttcTGTCGGTGACATGTGTGATAATGACcctgaatatttaattcaggAGTACAGAAAGAAGAATAAACTCTCCGAGGCAGAAATACAAATGTTGCGGGATTTAAGAGTACAACTTATTCACGAAGTGCCACCTCAACATAATATCGAATCAAAAGCTGGATCTCACGCACTCACTAAAGAAGagaaggaaaaatttaaaaaatacgcTGAATTAAAACAAGGTCCTTATAGTCCTAATgaggataaaattatttgtaaaaattggaagaaattttgtaaGAAACATAATTGGAACAGAAACAACTGTAAACCATTTTTGTATATGAGACACGATCAAAGagtacttataaaatttataagcgagaggaaaaaatttgtacaatttcTAGCACATAACTTACCCAATCGAAGTTTGTACAGTGTTTATCAACGGTTTAGGAAGTTATACAGCGGCGTTGTTCACGGGAGGTTTACACCTAGAGAAGACAGTCTTATCTTGGCGCACATTGAACAAAATCCCGAAGTTGATCCAAAACATATGCACGCAGACTTAGTGGACGTATTAAATCGGTCGAGAGAAGCCATCTGGCGTCGTTACCAAgtgctaaaaaaattaaagaaaaaagcaGAAGAAGATTGA
Protein Sequence: MSQEKVKKVNKSSVGDMCDNDPEYLIQEYRKKNKLSEAEIQMLRDLRVQLIHEVPPQHNIESKAGSHALTKEEKEKFKKYAELKQGPYSPNEDKIICKNWKKFCKKHNWNRNNCKPFLYMRHDQRVLIKFISERKKFVQFLAHNLPNRSLYSVYQRFRKLYSGVVHGRFTPREDSLILAHIEQNPEVDPKHMHADLVDVLNRSREAIWRRYQVLKKLKKKAEED

Sequence clustering based on sequence similarity using MMseqs2