Basic Information

Insect: Synergus itoensis
Gene Symbol: Sall1
Assembly: GCA_904066005.1
Location: CAJFCP010000504.1:13333-18734[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.00012 0.016 16.4 0.3 2 23 327 349 326 349 0.92

2 4 0.00056 0.077 14.3 0.0 2 23 375 397 374 397 0.97

3 4 3.6e-05 0.0049 18.0 0.8 3 23 423 443 422 443 0.99

4 4 8e-07 0.00011 23.2 1.7 1 23 449 472 449 472 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.00012	0.016	16.4	0.3	2	23	327	349	326	349	0.92
2	4	0.00056	0.077	14.3	0.0	2	23	375	397	374	397	0.97
3	4	3.6e-05	0.0049	18.0	0.8	3	23	423	443	422	443	0.99
4	4	8e-07	0.00011	23.2	1.7	1	23	449	472	449	472	0.95

Sequence Information

Coding Sequence: ATGGCGACAGAAAAAATGTCTATCGCCGCTTCAGAAAACTATCAACTGAAATGGCACAGCTACAGTGCTCATCTTCATAGTTCAGTCGCAACTTTGCTTCACTCTGAATCTTTTGCTGATGTCTTGCTGGCAACATCATGCGGAAGACATGTGGCCGCTCACCGATTTGTTCTTTCAGCCTGCTCTTCTTATTTGAGCCACATTTTTCAAACATGCCACTTTGGAGCAAACACCAACTCACCCTACATTGTGGTACTTCCAACCGAGATTGGTTACCGAACTCTGAAGATTTTGATTCAATACATGTACAGTGGAGAAGCAACTGTAACAAATGATCAACTGGAAGGTGTCCTGAAAGCCGGAGACATCCTCAGAGTCCGGGGACTCTGGAGATCCAACACCGGAGGCAGCAAGAAGGAAAATATCCAATCCAACAACCAGAAAGTTGAACGAGACAAGAAAGAACCACCTCCCTTAACCGGGCAAATCCAAAAGATAAAACTCATCCAACCGGCAGAAAAAACTGTCGTTGAAAGTTCAGTCTCTCAGGCAACAACACCTCAAGCAAATCTTCAGACCAATAACAGCAGTGCTCTTCCGACCCAAAATAAAATCGTCGAGAGGAAAAATAGTGAGAGGGAAGAATTTGACGAGGAAAAAATCGACGAGATTGAGGAGAAAATTCTTTTGGATGATCCAAAAAATTCGGAACAGGGCAAGAATAAAGAAAATGTTGATCTCAGTGCTAAAAAGAGAAAAAGTGCTACTGATTCTGAGTCTACAAAGTCTAAGAGTGAAAGTGGTGACAATACCGAGTTGAACTTGGATCTTCTGGTGAAGGACGAACCGATTGATTGGGATGAGTCGATGGATCCTTCGGATTCTCTGACGATTGATCATGAAATTGATATCAAACCTGAAATCGTACACAGTGCAGACGAGGATGGAGATATGGAAGAAGAGGAATACACCCCGCTCACATGCGACATGTGCAGTCAGACTTTCAACAGACCTTCCGATTGGGTTCGACACATAGAATTCACTCATGCCGACATGACTGAGAATCGAAGAAAAAGGCGAAAGGGTGACACTGAAGACGACAGCAAGGATTTTCCTCCCCTGAAATGCGACCTCTGCGGAAATATGTATCCAACGCCACAGGAATGGGTCCGACATATTCAGACCGAACACACGGAAGAGCAATTAGCATTGATGAACAATTCTGCACCACCTAAGCCTAAGAGAATTCACAGCCATCAAAAACTCTGTAATATTTGTCAGAAAGTATTTCCCAGTCACGCATCCATGGTCATCCATCAGAGAACGCACACAGGAGAGAGACCGTTCCTCTGTTCCTACTGTAAAAAAGGTTTTAATGTAAAAAGCAATTTGTTGAGGCACTTGAGGACGCTACATGACAAGTTTGTGCACCCAAGTTTGTTCGGGAGCAATGGAAACAAAAATGCTTAA
Protein Sequence: MATEKMSIAASENYQLKWHSYSAHLHSSVATLLHSESFADVLLATSCGRHVAAHRFVLSACSSYLSHIFQTCHFGANTNSPYIVVLPTEIGYRTLKILIQYMYSGEATVTNDQLEGVLKAGDILRVRGLWRSNTGGSKKENIQSNNQKVERDKKEPPPLTGQIQKIKLIQPAEKTVVESSVSQATTPQANLQTNNSSALPTQNKIVERKNSEREEFDEEKIDEIEEKILLDDPKNSEQGKNKENVDLSAKKRKSATDSESTKSKSESGDNTELNLDLLVKDEPIDWDESMDPSDSLTIDHEIDIKPEIVHSADEDGDMEEEEYTPLTCDMCSQTFNRPSDWVRHIEFTHADMTENRRKRRKGDTEDDSKDFPPLKCDLCGNMYPTPQEWVRHIQTEHTEEQLALMNNSAPPKPKRIHSHQKLCNICQKVFPSHASMVIHQRTHTGERPFLCSYCKKGFNVKSNLLRHLRTLHDKFVHPSLFGSNGNKNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00755038;
90% Identity: iTF_00011321;
80% Identity: iTF_01391343;