Basic Information

Insect: Synergus itoensis
Gene Symbol: -
Assembly: GCA_904066005.1
Location: CAJFCP010000069.1:1894310-1900999[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.7e-06 0.00063 20.8 1.2 1 23 161 184 161 184 0.97

2 15 0.12 16 7.0 0.1 2 23 246 268 245 268 0.88

3 15 0.81 1.1e+02 4.3 6.3 1 23 297 320 297 320 0.95

4 15 0.00047 0.064 14.5 0.2 2 23 356 378 355 378 0.90

5 15 0.082 11 7.5 2.3 1 19 449 467 449 470 0.98

6 15 0.0018 0.25 12.6 0.4 1 23 720 742 720 742 0.98

7 15 0.015 2 9.8 0.5 5 20 833 848 831 850 0.91

8 15 0.00028 0.038 15.2 0.7 1 23 1018 1040 1018 1040 0.98

9 15 0.15 21 6.6 0.3 6 23 1051 1069 1051 1069 0.94

10 15 0.82 1.1e+02 4.3 0.6 2 21 1074 1093 1073 1094 0.92

11 15 2.1 2.9e+02 3.0 1.2 1 23 1136 1159 1136 1159 0.92

12 15 0.009 1.2 10.5 3.2 1 23 1188 1211 1188 1211 0.89

13 15 0.54 74 4.9 5.5 2 23 1217 1237 1217 1237 0.97

14 15 0.002 0.27 12.6 3.7 3 23 1243 1264 1241 1264 0.93

15 15 0.0024 0.33 12.3 0.9 2 20 1272 1290 1271 1292 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.7e-06	0.00063	20.8	1.2	1	23	161	184	161	184	0.97
2	15	0.12	16	7.0	0.1	2	23	246	268	245	268	0.88
3	15	0.81	1.1e+02	4.3	6.3	1	23	297	320	297	320	0.95
4	15	0.00047	0.064	14.5	0.2	2	23	356	378	355	378	0.90
5	15	0.082	11	7.5	2.3	1	19	449	467	449	470	0.98
6	15	0.0018	0.25	12.6	0.4	1	23	720	742	720	742	0.98
7	15	0.015	2	9.8	0.5	5	20	833	848	831	850	0.91
8	15	0.00028	0.038	15.2	0.7	1	23	1018	1040	1018	1040	0.98
9	15	0.15	21	6.6	0.3	6	23	1051	1069	1051	1069	0.94
10	15	0.82	1.1e+02	4.3	0.6	2	21	1074	1093	1073	1094	0.92
11	15	2.1	2.9e+02	3.0	1.2	1	23	1136	1159	1136	1159	0.92
12	15	0.009	1.2	10.5	3.2	1	23	1188	1211	1188	1211	0.89
13	15	0.54	74	4.9	5.5	2	23	1217	1237	1217	1237	0.97
14	15	0.002	0.27	12.6	3.7	3	23	1243	1264	1241	1264	0.93
15	15	0.0024	0.33	12.3	0.9	2	20	1272	1290	1271	1292	0.93

Sequence Information

Coding Sequence: ATGGATGGAATAACACCTCAAGTTTTAGAGAGTGTTACAAATTCTGAAGTGAAAACTGTTGTCTCCGGCGCAACGTGCGATGAAGAAGTTACCATCAAGCAAGAAATCCAAGATATCACGGACAGAGATGAAAATTTTGAACTTCAGTCTACAATATCGACAGGATCTGTGATCAGTGATGTCAAGATGGATCACGAAAAAATGTATTCCTTTTACAAAGAAGGCTTCAATTTGAAAGACTGTTTTATTCGCCTCGAAAAATGCGATAAAATCTGGGAAACTCTAAAGGTTATAAAGAATCTCCAGCTCTCAAATCCCAAGGAAACGAAAACTGGGGACTATGCAGCAGCTTTCCAAGATGCCATGCACAGTCATTCGAAGCCCTCGACACCAGAACCGATGCAGTACCATCCCGTCTTAAACAACGGAAATACTGCCTTGCCCAATTTTCAGTTTGCCATCAAGAGCTGGAAACGATTGTACACTTGTACCTATTGCGGAAAGCAATATACCGAGAACCGAAATCTAAAATTGCACATGGCAAAAGTTCACTCCATATTTCCTACTTCCAAAAAAGTACTTACACCTAAGGAAGTTCCTCAAGTTCCTCTTAATAATGAAATTTCACGTCCTTTAGATATTCCTCGTTCCAAGGAGATTTCTCGTCCTAAAGAAGTTTCTCAAACTAAGGAAACTTCTCAACTTAACAAAAATTCTGTGAAGCCAAATCCTTTAGTCTGCCAAACATGTGGCAAAAGTTATGCTGATGGTCGTTCAGTGGCTTCTCACTCTCTCCGTGTGCACGGAATTCTAACCGAGTACCACGAACGATGGTTAGCTCAACAAGAAAATCCCAACGATTTCACCGTGGAAGATCTACTCAAACGACACTCATGCAAAACTTGTGGTAAAAGGTACAGCTGCATGAAAAGTTTACGTTTGCATTATTTGCGAGAACACAATGTCGTTATTCCTATGATGCGGGGAGGTCGGAATTCAGCCTCCTTCATGTCATTGCCGAAAAAAGCAGCAACACATTCCGGTGATATGCAAAAGCACATGAACGTCTGTAATATATGCGGGAAAATGTACACTAAAAACTGGTATCTGCGTGTACATTCGCTCGAAGTTCATGGCATTCCTATGCCTTGTGGCAGAGTGAAGTCAAACTTCCCTCCTAAGTTGCGAGTCATAAAGAAAGAAATTGTCGAAGGACCTCCATCTTCAAAAGAGGAACAGAAGTTTTCTCCACCGGTAAATTCCTCAATATCAAATCAAAAGCACAAGTTAGCTGAAACTAAAAATCTCAAATCCCCAATCACACCTGCGCGAGTATTAAAGATGTACCAATGTACGTCTTGTAAAAAGGAATTCATGTCTATTTCCAAATTACGCACACATTGCTTTGCTCGTCATGGAATTGTAATACCGAGGATACGAAAACCCTATCGGAAGAATAATTCTGTACCTGTAAAGGTGGAGTTTGAGACGAAGATTAAATTAGAGGAAAAAAGAAAACCTCAAGTTTCGACTCCAAAGCAAGTCAGTTTGGACCGATTCTTGAAAAGCTCTCCCATTGGGGGAAGCACATCCAACAAGATCAGCTCGAGTTTACCTCCACCACAGAGTGGTCCTATAAGAGAAAAAGTCATCAAGCAAACATTTCTTCCAAGAGAAACAGTTGCTCCAATGGAAAACGCTCCAGCCTCAGTGAAAGTAAACTCTCGTTCAAAAGAAAAGGTTTCGAAGATACCAACAGAGTTTGTCAAGTGCAATTTGTGTTCTCGGGCCTGTAAAGACATCAGGAAGCACTACATTGCTTATCATAAAATTCGTTATCCTGAGTCTGTACTGGAAGCTCCATTCTTCGTCAGTGAACCAGTTGGAAGCACTGTGACCCCGGCAGTTATTCCTGGAAAAGAACAAGTGTTGGCATCAGAATCAGAAACGCAAGAAAGGCTTTCAACAAATAGACCCACGAAGAAGAGAAGACGTAGATTTTTCACAATGATGCCGCGAAAGAGGCGCAGGACTGAAGAACCTCGGCAGCAAGAGGTTCCAGTGATTCAAAGTCCAGTAGCTCCAACTCCTGAAGTAAATAACTTTGGAGTCCAGGGTCCCAAAACTAAAACGGTTTCTGACCCTGACAAAACGACATTTAAATGCAACATCTGTGACGGATACTACGCGAATGCTAGAAGCTTGAGAATTCACAGAGAAAAACATAAATCGAAGGGTGAGACTAGAGAGAACATTCACCTTATTAAGCATAATTATAAAAATGGATGGAAGTCAAATAAGAAAGTCGAAATGTCAAGCTTTGATGAAACTGCAGTAAGCATGGATGCGGATATGGATGCAGATGTGGACGTTGAGAATGACTCCTTTACGTCTTACAATGACAGCGTTGCGCAGTCGTCTAGTTCAGAATCGAGGGATAGTAATCGAAGATCGACGAGGAGTACAAGCTCTTACACTTTGAGCGAAATTACTTGCGAATGCGGAAGGTCCTTCCGCGATCCTCATACGTTATTTGTGCACAAGGAGAAGTGCAGAAAAGCGCATAGAATCGAAAGAGAGAAATCGATGGTTACGAGATCCAGTAGCGATCGGGATTCCGGAATTGGAATAAGTATTACGATAAAGAAGAAGAATGATTCGTATGAAATAGTCAGCAGGGACAGTGGCGATGATGATAAATCTAAGGATTCTATTACTTCGAAGGAAATGGATCAGATGTCCCGTTCTTCCGACACTAATTCCTCTAGCTCAGTCTTTAACGGTAGGAATTACTGTGATCTGGTACCGGCGCAATGTAGTAAGGACCACAGCATCCTAAAGATTCAGGGAAATGGGAAAGAAAAGGGAAAGAGTGGAGCATTGTGGCGGAGCATATCAGCCAATATTTTACGACAATGGCAGGTTAAGCTCAAAGAGCGATTAATGGAGCCGCGGTATCAACCCGAATCCGTGGACGTAGACACACTCGAAAAGCAGCATGAATCTCTCAGAAGCGAGAGTAGGATGGTAGATCCCTTAGATGTAGACCTTTACAGATGTGCAACATGTCGTGAACTTTTCAAAACCGAAGGAGATCTAAGAAAGCACATGACCATTCATGAAAAACGTCCTGCCCGACAGGAATGTCCTTGTGGAAAGACCTTTAGAGGGTCTCAAAGTTTTCTCACCCACGTACAAGAATATCATCCTCTCTGGCTTCAGTGTGGATATTGCGACGCGAACTTTTTAAATAGTAAAGAGTATTATGCACATATTTGCAAAGTAAATCAAGGAAAAGATTTCCAAGATCTGCAAGAGGTTACCTGTAACATTTGCCAGTTTAAAGTCAAGATGATAAACTTTGATGCTCACGTAAAACGAGAACACTTGGTTCCCCAGGCTCCCTATTTATGCTATTATTGCCAAATGCGATTCTTCAATGGCATTCAAAGAAGAGCACACTTGAGTAAAGAACACACTAGACCCTCCTGTAGAGTTTGTGGCAAAGTTTTACGATTTGACTTTGCAGCAAAGCACGAGGCTTATCATGACGGTCTTGGTTATCCTTGTCATATTTGCAAAAAAGCTTTCTCTTCCATGAAACACGCGAATAGTCATAAATATGAAGTTCATGTCAGAGAAGATGAAGAGTGCAAAATTTGTAAAAAAGTTATCAGCCATAGGCATATGAGATATCATATGCGAATGCATTCTAGCAAGGATAATTGTAAAATTTGTAATAAGAATTTTCACAATAACCGTTCGTTACAAGATCACATTCATTTGATACATGCAAATAATTATCCATTTGTAAAGTGTGATAATTGTCAACTGTCCTTTACATCTGAAAGATATCTTAAACGACATTTTAATCAAGATGTATGCACAAATTTTAGTAAAGAATCGAATGTAATGGAAAGTAAGGAGGTAGAAGAAAGTGAGGAGGAGGAAGATGTGGAAGTGGGGGACACAGAGGAGTGTGAAACTGAGGATGTGGACGTAACTGAGGAAGTGGACGAGATTCAGGAGGTGATGAACGTTTCCAAAATAAGAGCCACTTTGAACAAGGAAACTGAGAATCACAAACCAAAAGAGGAGGAAGAGACTTTAAAGGAAGTAGCTTTGATTACGGAAACGAATGGGGAGACAGAAATTTCTGAGGAGGAAGAAACTGTGGTGCTGAACATGTCTGAAGATATAATAGAAACTGAAGAAATAGAAACCAAGGAGGTGAACATTCTTGAGAATATAAAAGAAACTAAGAAATCGGAAGAAATTTCGGTGATGAAAGAAATTGAAGAGAGAAAAGAAGATTCAGAAAAGGGAAAAATTTCAGAGATGGAAGTAGTTTTGAAGAAAGAAGACATTTTAGAAAAGGACGGAACTTCGCAGAAGGAAACTGAGGAGATGATAGAAAAGACTTTGGAGAAGGATGTTGTTTCAGAGAATAAGAAAGCTTCTTTGATACAAGAAAATTCAGATTTAAGAGGACTTGTTGAGACAAAAGAAACCTCCATGACGAAAGAAATTCCGAGCAAGAAACATGTTGAGTCGTAA
Protein Sequence: MDGITPQVLESVTNSEVKTVVSGATCDEEVTIKQEIQDITDRDENFELQSTISTGSVISDVKMDHEKMYSFYKEGFNLKDCFIRLEKCDKIWETLKVIKNLQLSNPKETKTGDYAAAFQDAMHSHSKPSTPEPMQYHPVLNNGNTALPNFQFAIKSWKRLYTCTYCGKQYTENRNLKLHMAKVHSIFPTSKKVLTPKEVPQVPLNNEISRPLDIPRSKEISRPKEVSQTKETSQLNKNSVKPNPLVCQTCGKSYADGRSVASHSLRVHGILTEYHERWLAQQENPNDFTVEDLLKRHSCKTCGKRYSCMKSLRLHYLREHNVVIPMMRGGRNSASFMSLPKKAATHSGDMQKHMNVCNICGKMYTKNWYLRVHSLEVHGIPMPCGRVKSNFPPKLRVIKKEIVEGPPSSKEEQKFSPPVNSSISNQKHKLAETKNLKSPITPARVLKMYQCTSCKKEFMSISKLRTHCFARHGIVIPRIRKPYRKNNSVPVKVEFETKIKLEEKRKPQVSTPKQVSLDRFLKSSPIGGSTSNKISSSLPPPQSGPIREKVIKQTFLPRETVAPMENAPASVKVNSRSKEKVSKIPTEFVKCNLCSRACKDIRKHYIAYHKIRYPESVLEAPFFVSEPVGSTVTPAVIPGKEQVLASESETQERLSTNRPTKKRRRRFFTMMPRKRRRTEEPRQQEVPVIQSPVAPTPEVNNFGVQGPKTKTVSDPDKTTFKCNICDGYYANARSLRIHREKHKSKGETRENIHLIKHNYKNGWKSNKKVEMSSFDETAVSMDADMDADVDVENDSFTSYNDSVAQSSSSESRDSNRRSTRSTSSYTLSEITCECGRSFRDPHTLFVHKEKCRKAHRIEREKSMVTRSSSDRDSGIGISITIKKKNDSYEIVSRDSGDDDKSKDSITSKEMDQMSRSSDTNSSSSVFNGRNYCDLVPAQCSKDHSILKIQGNGKEKGKSGALWRSISANILRQWQVKLKERLMEPRYQPESVDVDTLEKQHESLRSESRMVDPLDVDLYRCATCRELFKTEGDLRKHMTIHEKRPARQECPCGKTFRGSQSFLTHVQEYHPLWLQCGYCDANFLNSKEYYAHICKVNQGKDFQDLQEVTCNICQFKVKMINFDAHVKREHLVPQAPYLCYYCQMRFFNGIQRRAHLSKEHTRPSCRVCGKVLRFDFAAKHEAYHDGLGYPCHICKKAFSSMKHANSHKYEVHVREDEECKICKKVISHRHMRYHMRMHSSKDNCKICNKNFHNNRSLQDHIHLIHANNYPFVKCDNCQLSFTSERYLKRHFNQDVCTNFSKESNVMESKEVEESEEEEDVEVGDTEECETEDVDVTEEVDEIQEVMNVSKIRATLNKETENHKPKEEEETLKEVALITETNGETEISEEEETVVLNMSEDIIETEEIETKEVNILENIKETKKSEEISVMKEIEERKEDSEKGKISEMEVVLKKEDILEKDGTSQKETEEMIEKTLEKDVVSENKKASLIQENSDLRGLVETKETSMTKEIPSKKHVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01393846;
90% Identity: -
80% Identity: -