Basic Information

Insect: Synergus itoensis
Gene Symbol: -
Assembly: GCA_904066005.1
Location: CAJFCP010000132.1:433583-437161[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.52 70 4.9 0.4 1 20 105 124 105 128 0.93

2 13 0.01 1.4 10.3 4.6 2 23 268 290 268 290 0.91

3 13 6.4e-05 0.0087 17.2 1.5 2 23 376 398 375 398 0.96

4 13 6.1 8.2e+02 1.6 7.8 3 23 487 508 486 508 0.96

5 13 0.09 12 7.3 0.8 1 23 557 580 557 580 0.95

6 13 0.0003 0.041 15.1 0.5 3 23 630 650 629 650 0.97

7 13 0.00045 0.061 14.6 0.3 2 23 672 694 671 694 0.93

8 13 0.0077 1 10.7 3.6 2 23 734 756 733 756 0.96

9 13 0.1 14 7.1 4.2 3 23 771 792 769 792 0.92

10 13 0.00027 0.037 15.3 0.1 2 23 836 858 836 858 0.93

11 13 0.068 9.2 7.7 0.9 1 23 937 959 937 959 0.98

12 13 0.0001 0.014 16.6 4.2 2 23 974 996 973 996 0.96

13 13 0.0045 0.61 11.4 0.4 1 23 1067 1090 1067 1090 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.52	70	4.9	0.4	1	20	105	124	105	128	0.93
2	13	0.01	1.4	10.3	4.6	2	23	268	290	268	290	0.91
3	13	6.4e-05	0.0087	17.2	1.5	2	23	376	398	375	398	0.96
4	13	6.1	8.2e+02	1.6	7.8	3	23	487	508	486	508	0.96
5	13	0.09	12	7.3	0.8	1	23	557	580	557	580	0.95
6	13	0.0003	0.041	15.1	0.5	3	23	630	650	629	650	0.97
7	13	0.00045	0.061	14.6	0.3	2	23	672	694	671	694	0.93
8	13	0.0077	1	10.7	3.6	2	23	734	756	733	756	0.96
9	13	0.1	14	7.1	4.2	3	23	771	792	769	792	0.92
10	13	0.00027	0.037	15.3	0.1	2	23	836	858	836	858	0.93
11	13	0.068	9.2	7.7	0.9	1	23	937	959	937	959	0.98
12	13	0.0001	0.014	16.6	4.2	2	23	974	996	973	996	0.96
13	13	0.0045	0.61	11.4	0.4	1	23	1067	1090	1067	1090	0.98

Sequence Information

Coding Sequence: ATGACATCTACAGTCGTTCAAGAAATTCGGCTACCGGAACCAACTGATTCCGAACCAGCGGACAGCGATGGGTCCAGCAATGAGGACCGAGATGCGAGAAAACGTCTCCTTGGAGAAGCGGACTCTTCAGGACCCAAAAAGAGACGAAAACAAGCGACTCCTGTGAGATTTCCAACTTCCCTCATGCTTGGTGATCATCCTGAGTCTGAGGAAGAAGAGGAAGATGCAGATCCGGAAGGTAAGCCGAATTCGCCACGAGCGGAGGCACTTCAAGGCCATCCAACAACGAAAGATGAAAATTTAAATATAGAATTCCGGTGCCAGTACTGTAGTCAATTGTTCGATGGCAAAGCAACCCTCGACCTCCACCTCGAGTGTGAGCACAATTTTGTAAACGCGTCCCACATACCTTCAGATAGCCAATCACCTCAGCCGGGAAGTCAAAGTCAAACGACTGTAGAAACGATCAATCAGCAATCTGATCAATCTCTTCATTTACCTCATCTTCCCAATATCGAAATCAAAAACTTAGGCCCTTCCTGGTTCTCAGAGCATGTGCAATCTCAGAATCATAATCAAAATCAAACGCAGACTCAAACCCAACAACAGAGTGAGGAATGGTCGGCAAACTGTCATATGAATCCGATCACATCTATGCCAAATCTAGCAGGATTGCCAAATTTTACTGGAGGACTTCAACAGTATTTCCCTCTACCCCCAGGATTTACCCTTTCCGATTCTGGCCAGATCCATCGAACCACTTTGGGGCCAGCACCGGTGCGAATTTTTAATCCCGACGCTTACTGTGATCTCTGCAATAAGGAATTTTGTAACAAGTATTTTCTCAAAACGCACAAGGCTAACAAGCATGGTATTTATGTGGATCCTCCGAATCCAATGACAATGGGGGAGAACAATGTGGGGATTGGACCACTTTATCCGATAGGACCAATGCCTGGAAACAATATTAAATTGGAATCCAATCAAAAATTAGAAGGTGGTACTAGTGTTCAAGTACCACAATTGCAACAGATTTCACAATTAACGCAGTTGCCACAAATACAACAGTTGCCACAATTGTCACAATCACCTCAGATTCCACAACCACCTCCACCTCCAACCGTTCCCTGTGATATTTGCCATAAAAGGTTCCGAAGCGAGGAATCAGTTAGGAAGCACCAGCAAAAGGTGCACACTGTATCAGCATCAGAAGATCAGAAGAATCCTAATCATCAGGTCCAACAATCATCTGTAGCTGATGAGGAGAGGGAAGTGCATCACCAAAGTCCTGGAGCAATGGAGATGCTCTTCAAACAAGAATATGGAGTTGAGCAAGAAGACAATGCGTTCATGCCACCACCGAGACATCTTTCCCCTCAAGCTATTCAACAAGCCAAAGAATCCAACTTCAGTGCCGAACGACTTCGCAGACTGGGGGTCTTAAACCCAGACGCGTTTTGCGAAATTTGTTGTAAGGAGTATTGCAACAAATTCACCCTACGAACCCATAAGATGAAGAGACATGGGATAGTGATCCAGGACAACGAAAAGCCACCACTGAATCCGGGATCAGCTGCCACCTGGCATCAAGTGCAAACCACCCCCTTGAACTTGATCATCAACGAGGCAGGAAGTGGATCCGAGTACAGCGATAGATCAACTGACGATCACGAGTGCAAACCTTGTGGAATCCGTTTCCAAAACCTTGGACTATACGAGTCTCATCGTCAAAGAGTTCATGCTGAGGAAACTTCTCCTAAGATCGAGTTTGATTCAGAGTCTGTGGAACAACGAATTACAAGCAACGATGCCATTTCTGAGGATCTGCAAAAACTCCAAACAATGATTTTACAACTGAATGGTCTCGAAACTAACAAGATCTCTGCATGTTCGGTTTGTGGGAAAGAGTGTGATTCCAGAGTTAGTTTAAGAATTCATATGATGGAGCACGGTATCACGACAGAAGAGCCAGCATCACCATCTCAAGAAAAATCTTCAACACCTATTTCTACATACTGTACCTTGTGCGAGAAAGAATATCCAAACCAAGAAACTCTGAGGAAACATATCTCAGAAGATCACAAACAATCCTACGATTCGACTCTTGTGCCGCATGTACCATCTATTTCTATGCCCTCAACTCCAACATCTATTCAGGCATCCGAACGCAAAACTTCATCCTTAACTCCCACATCCAGTTACTGCGAAATTTGCAACAAGGAGCTGTGCAACAAGTACTTTATGAAAACGCACATGCAAAGGATGCATGGTATCGAAATTGAAAATGGGGCTCAGATCGGCGGAGTCATCTGCAACATCTGCAACAAGGAACTATGCAGCAAGTACTTCCTACGGGTCCACAAACATAATACCCATGGAATTGTCGAAGAAGGCTCGAATCTTGGAAACAAACAAGAAAACTTTGATCCGCAAACTACAGAGGATATAGCTTTAAAACCTGAACCTGGTGATTTGAATCACAGATACTTCACTCATTTTACAGAGGTTTGTCCTGTCTGTAACAGAAGATTCAGAAGCATCAAGTGGCTCAAAGCTCACTTATTGGGTGACCATGGAAAAATGGGGATTGACAAATGGAAGGAATTGGAACAACACTACCAAGCAAATCAGAGGACCAACAACAGACTAGCAGGAACTTCAAGACCCAGTCAGCCAAGTACGCCTCTGAAGATACCTAATGGTTTCGAATCCTCCCAAACCAAGGTTTCCGATTTGACTGCAACCCTAGGGAACCAAGTACTCTCAAACTTATTCGGGTCTTCAATCGAAGATCAACAATCTAAAAGTTACAGATGCTCCTACTGCAACTTTGCCACTACTGTCTTACCTTTCCTCTTCCTCCATGAAAGATCTCACACCAATCCCCAAGAACCTGCAACCGAAAATGACAAATTCTTACAGTGTCCTCTCTGTCCGCAAAGTTTTTCCCAACCAGAACACTTTCACCATCATCTTCTAACTCGTCATCAGTTCCCTAATATACTGTCCCAATTTCCAGCTCCTATTTTTAATAACCTCAGGCTAGAAGCCTTTGGAGAAAAGAACAGCGATACCAAAGAGATAGAAATGGAACCCGAGGAGCAGAAGAATCCGAGTCCTCAAGCCCAGAACAATTTAAATGAACCGAGTATTCAGAAGCAAAATGATACAGCTGTACAGGTGACACCTCAAGGGGTCTATAAATGTGCGCAGTGTGGATACGCGACAGCAAATTTGAATCGCATCAAAAAACACATCAGAAAAGATCACAAGGCATTTGGAGAACCGACGGAAAGTGTTATTGCAGAGTTGAGCAAAATTCTCAAGGAGGTTGCCAATAAGCATAAAGTTCCTGCAAGTTATGCGATGCCCCAGGACTTGAATTCGAATCCGGAGAAGACGATAATGCAACCTTTTTTGATTGAGGAGCAGCAGTTCTCCCCAAGTCAGGATTGCGGCACAACTGGAGGGGAAGAATCTGGACCTTTGAAACGTTTTGCACCGGCCTTGGTCTACCTGCCAGTTAAGGCAAGAGTCAATGGCTCTCTCACAGCATCTTTCACCTTGAGTCCTGCGTAA
Protein Sequence: MTSTVVQEIRLPEPTDSEPADSDGSSNEDRDARKRLLGEADSSGPKKRRKQATPVRFPTSLMLGDHPESEEEEEDADPEGKPNSPRAEALQGHPTTKDENLNIEFRCQYCSQLFDGKATLDLHLECEHNFVNASHIPSDSQSPQPGSQSQTTVETINQQSDQSLHLPHLPNIEIKNLGPSWFSEHVQSQNHNQNQTQTQTQQQSEEWSANCHMNPITSMPNLAGLPNFTGGLQQYFPLPPGFTLSDSGQIHRTTLGPAPVRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDPPNPMTMGENNVGIGPLYPIGPMPGNNIKLESNQKLEGGTSVQVPQLQQISQLTQLPQIQQLPQLSQSPQIPQPPPPPTVPCDICHKRFRSEESVRKHQQKVHTVSASEDQKNPNHQVQQSSVADEEREVHHQSPGAMEMLFKQEYGVEQEDNAFMPPPRHLSPQAIQQAKESNFSAERLRRLGVLNPDAFCEICCKEYCNKFTLRTHKMKRHGIVIQDNEKPPLNPGSAATWHQVQTTPLNLIINEAGSGSEYSDRSTDDHECKPCGIRFQNLGLYESHRQRVHAEETSPKIEFDSESVEQRITSNDAISEDLQKLQTMILQLNGLETNKISACSVCGKECDSRVSLRIHMMEHGITTEEPASPSQEKSSTPISTYCTLCEKEYPNQETLRKHISEDHKQSYDSTLVPHVPSISMPSTPTSIQASERKTSSLTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVEEGSNLGNKQENFDPQTTEDIALKPEPGDLNHRYFTHFTEVCPVCNRRFRSIKWLKAHLLGDHGKMGIDKWKELEQHYQANQRTNNRLAGTSRPSQPSTPLKIPNGFESSQTKVSDLTATLGNQVLSNLFGSSIEDQQSKSYRCSYCNFATTVLPFLFLHERSHTNPQEPATENDKFLQCPLCPQSFSQPEHFHHHLLTRHQFPNILSQFPAPIFNNLRLEAFGEKNSDTKEIEMEPEEQKNPSPQAQNNLNEPSIQKQNDTAVQVTPQGVYKCAQCGYATANLNRIKKHIRKDHKAFGEPTESVIAELSKILKEVANKHKVPASYAMPQDLNSNPEKTIMQPFLIEEQQFSPSQDCGTTGGEESGPLKRFAPALVYLPVKARVNGSLTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00011446;
90% Identity: iTF_01389736;
80% Identity: -