Basic Information

Insect: Synergus itoensis
Gene Symbol: -
Assembly: GCA_904066005.1
Location: CAJFCP010025832.1:3736-14455[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00082 0.11 13.7 0.9 1 21 390 410 390 411 0.96

2 17 0.0096 1.3 10.4 0.7 1 23 552 575 552 575 0.98

3 17 0.013 1.8 9.9 0.7 1 23 604 627 604 628 0.97

4 17 0.00011 0.014 16.5 3.7 1 23 627 649 627 649 0.96

5 17 0.027 3.7 8.9 0.9 1 23 654 676 654 676 0.96

6 17 0.19 26 6.3 2.8 1 23 678 701 678 701 0.94

7 17 0.057 7.8 7.9 0.0 2 19 705 722 704 726 0.92

8 17 0.87 1.2e+02 4.2 0.4 3 13 735 745 734 747 0.88

9 17 0.0095 1.3 10.4 0.3 1 23 926 949 926 949 0.97

10 17 0.00011 0.015 16.5 2.9 1 20 989 1008 989 1010 0.94

11 17 0.0018 0.24 12.7 2.3 2 23 1012 1033 1011 1033 0.96

12 17 0.00063 0.086 14.1 0.5 3 23 1037 1058 1036 1058 0.97

13 17 0.42 57 5.2 1.0 3 23 1063 1084 1062 1084 0.93

14 17 0.011 1.5 10.2 1.1 1 23 1091 1113 1091 1113 0.97

15 17 0.0026 0.36 12.2 0.2 1 20 1119 1138 1119 1140 0.92

16 17 0.00057 0.078 14.2 1.1 1 23 1150 1172 1150 1172 0.97

17 17 0.00074 0.1 13.9 2.5 1 23 1556 1578 1556 1578 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00082	0.11	13.7	0.9	1	21	390	410	390	411	0.96
2	17	0.0096	1.3	10.4	0.7	1	23	552	575	552	575	0.98
3	17	0.013	1.8	9.9	0.7	1	23	604	627	604	628	0.97
4	17	0.00011	0.014	16.5	3.7	1	23	627	649	627	649	0.96
5	17	0.027	3.7	8.9	0.9	1	23	654	676	654	676	0.96
6	17	0.19	26	6.3	2.8	1	23	678	701	678	701	0.94
7	17	0.057	7.8	7.9	0.0	2	19	705	722	704	726	0.92
8	17	0.87	1.2e+02	4.2	0.4	3	13	735	745	734	747	0.88
9	17	0.0095	1.3	10.4	0.3	1	23	926	949	926	949	0.97
10	17	0.00011	0.015	16.5	2.9	1	20	989	1008	989	1010	0.94
11	17	0.0018	0.24	12.7	2.3	2	23	1012	1033	1011	1033	0.96
12	17	0.00063	0.086	14.1	0.5	3	23	1037	1058	1036	1058	0.97
13	17	0.42	57	5.2	1.0	3	23	1063	1084	1062	1084	0.93
14	17	0.011	1.5	10.2	1.1	1	23	1091	1113	1091	1113	0.97
15	17	0.0026	0.36	12.2	0.2	1	20	1119	1138	1119	1140	0.92
16	17	0.00057	0.078	14.2	1.1	1	23	1150	1172	1150	1172	0.97
17	17	0.00074	0.1	13.9	2.5	1	23	1556	1578	1556	1578	0.97

Sequence Information

Coding Sequence: ATGGGCGAATCAAGTTTGCAAGATTTTCAGAGATGCCGACTTTGTGCTCTTCCATTTTCTTCAAATTCACTAATTGCTTTCAGCAATACTATCTACGAGCCCATGATTGACAAACTTCGCCCATTTGGAGTGAATATAAAGAGAGATGATGGTTTACCGGAAAGTATTTGCAATGGCTGTACCAGTATACTGGAAACATTCATCGAGACAATGGAACTTTTCTTAGAGGCTGACAAAAAGTTTAAAAAACTACTGGAAGCCAGTAAACCAACCATAATTGAAAAACCTATTCACGAAAAGAGAAAGTCAATAAAAAGCACCGAGGATAAGGAAACAAAAGGATTGAAAAGAAAAGTTGAAGAAGAGGTTGTTGAAATCAAAAGAACCAAAAGAAGAGATCATCTCAATCTTTTAAGAAAAATGCGAACTCCAGCCGCAAATCATTCAAAAGACGTGGATGGCAAAAGCACAAAAGAAAAATGTAAAGAGATAGCAAACGCGAAGAATGACTTGATCGAGCAAACAGAGATTAAGAATAATAAAGATTCAGGAGTAAGACAAAAACAAGAAAGAAAACAAACACTAGAAACGAGAGAATCTGAGGAAGACTCGGAGAATAATATATCCGACGAAGTTACAGCTGTAAATGTTACAGAAAAACAAGATCACGACTATAGTTTGGACGCTGATTTTAATGTGACTGACAAAACGGGCGCAAGAAATAATTCAAATGATAAAGAAGAAATAGACATTTCACAGGAAAGTGACCATGAAACCCGAAACAAACAAATTCCCCTTAAACCTGTCAAAATATTAACAATCGATAGAAAGTGTTTGCCGGAGAAAGACAAAGTAAATTTACCTGGGACTTCGAACCCTGTCTCTCGAATTTACACCCAGCCTTCAGATGACAAAGAAATTGATATTTTCATTTGCTTAGAGTGCCATCAGCTTTCTTGGAACAGAGAGACAACGCTTGAACACATTTACAAACAACACGCAGGAGGTGCTTTGACTTATAAAGCAAGATATATGGTGAAAAGGATAAATCACACAAAAGGTTACAATTCTCAGAAGCAAATTGTATGTATGCTTTGCTATTTCACCTTCTCTGATTCGGATTTCACTTCTTACTTAGAACATCTAACGGGTCATTATATGGCAATGTATAAATGTGTTCACTGCGCACAAAACTTTTCATCAAAGGAAGCTTTGGAAAAACACAAGCGCCTCTATAAGAATGATATTATAACCTGCAAAATTTGCAACGAGTCTATGGCTTTAGAGTTTTATGCAGGGCATCAAAGAAGTCATTCTTTGAGTTCCCGCACTTTATCAAAAATTAAGAAAAAGGCATTGAAAAGAAAGGAAAGTAAGCTATTGAAGCAAAGTAAGGAAAAATCAAAAAAGTCTGTTCAAATAAATGATAATGAAAAAGGAAGAGAAAAGATTCTGAAAAATCCAAATACTCTCTTGAAATCGAAAACAGCTGTGGAAAGTGACTTGGAAACGGTGATTATCGATGGGGAAGTCCAAATAGATGAAATAAAATGTAAAGATAATGAAAATTCTAGCAAAACGGACGATGAAATCCAAGAAATATCTCAAGAGAAATCAAGTAACATCACTCAAAAGAAGAGAGATCCGTGTTTCTATAAATGTACAAATTGTCTTCGAATTTTCCAAGATCGAGGTACTATCCTAAAACACATTCAAAGAATCCACCCTCTGATATGGGGGAATAAAAAGAGTCTTTTGGGAGCTAAAAAATTAAAATCTGAAGACCAAGAAGAAGATGCAAATGAAATTTACATGTGTAGAATTTGTCCGGTTGATTTCGACAATGATAGTACGTATTTCCAACATTTAAAAATGAATCATCATTGCAACAAATGCACTAAAACTTTCTACGATAAAGAAGAAATGAATAAGCACTTACGAGCTCACGAAAAGCGATTGCACATATGTGAACTCTGCGATGCAAGTTTCTACGTGGAAAAAAATTACCTGGATCATAAATTGACCCACAATCACAATTGCGAACTCTGCAAGTCAAGTTATCGCTCGTATGAGTCTCTCGTCAATCACAAGAAATTATCACATCCAAAAATCTCGTGTCCAATCTGTTTATTGAGTTTTGACAGTCCCGCGCTTTTAAGTAAACATGACGCAATGCATAGCAAAAAGAAAACCCCTACTCTCTGCGAACTTTGTGGAAAAAGTTACACCAAATCGAAGAAAAAAGTCAATGCAAAGGAAAATTTAAATTCAGAAGTTCAGATTGGAAGATTTGAGGAAATCACGGTACAGGAAGAAAATCATGAAATTGATCCAGAGATGGAAAGTGCTGTGAAAAATAAGGAAATTTTGTCAATTATTAGAGAAAGTAATGAAAATGATAAAGAAGAGTTCGACACATTCGTAGAAGATGGAGAAAACCAAGAGGAAGCAGAAGATATTGAAAGTGATACAGGAGAGCCTGATACTTACCAGAAATCTTTCTCGCAATATCTAAAAAATTTAAATGATTCAAGAAATGAAAATATCATTCCAAAAAATCAAAAGTTAAAACGGAATAATAAAACGTGGATTCAAGAGAGTCTTCCAAAGAAGAAGAGAACAGAAATTCCTACACCAATATCATCAACCGAAGAAATCCAAGAAATCTGTACAATAACAACTCCAGGACGACTCATTCCACCCGAAAACTCGGAATATCCCTTTTCAGTCGAAAAATCTATTCCATACAGTAAAATAGAAAAAGAAATCTTTCTCTTCGAGTGCGCAAGGTGCGGACGAAATTTCGTGAGCAGGAGGGCAATTTTAGAGCACTTGATGAAAAAACACAGCGACGAATTTAGACTTTGGGAGACTCTATACACAAAAAAGAAGTTAGAAGATAAAAAACCGAATGCAAAAACATTTAATAACGCATCAATGTGCTCGGATGATTTAAACATCCAGTACGTCTGCAGTAACTGTGATAAAACATTCTCAAGTAAAAATCTCCTCAAAACTCACAAGTGTGAATTAATCTGTCGTCTTTGCGACAAACACTTCGTTTTCAGAAATAACTACATAGAGCATTTAAAAACTCATGAAAATGATTGCGAAATTTGCAAAAAGCAATTCATTTCAGAATCGTTTTTAACAATCCACCGAAAGTCCGCTCATCCCGAAGGAATTTGCTACGTGTGTCACAGGTGGTTTTCTACAGAGACTCTTTTAAAAGATCACAAGACAATCGTTCATAATCTTTCTGTAATGACTTTTTTTTGTTTGATCTGTGAAAAGAACGTTTATTCAGAGAAAAAATTTCGCGCCCATATGGAAACTCACGGAAATAAGCGCCCTTTTCCCTGTCCTCATTGCGGGCGATCTTACGCTCGTTATTTTGCAATGGCATCACACACTGAAAGATGCAAAGAATTCGATGAAACAAACATCTTTGAGTGCGATATTTGTAAGAAAGCATTTTACAATAAAGAAAAATTCATACCTCATATGAAACAGCATATTAAGAATAACAAAATCTTGGAGGACGCTGAAGTCAAAGACGAAAAAGTTCAGAAACTTGTATCGAATACGCAGGTTTCGAAGCATTTATTGCAGAAAATTCCGAGTTCCAAGCTTAAGGATTCAAAGAATTCTGAAAAAAATAAAATCCTTCCAACTCCGTCTTTGAAGAATAAGAATTTGAAAAGTTTACACTTCGGTCCGAAGATTGTTTGGCGCGAGAGTACGATACAAACATCTTTACTCAACAAGCTTGAGAAAAGACGCGAAAGACAGGGGGAAAGAAAACAAGATAGGAATGTAACTGATCGACCCTTGCAAAGAGATAAAAATTCGAATCATTTTCCTGAAATGAGATTTAAGCTAAAGAAAAGGGTGGAGATGATGGAAATTAAGCAATCAGAAAACAATACATCTTTAGTTCCTAAAGAAAAGCCAGCGGGAGGAAATTGCAAAGAACAATCGATAGAAAAGCTTTTAATACTGAGACCAATCACTAAAGTGACAATGGAAGGAAACTTCGAGAGTGGAAATGAAATTATAAAATTAGACTTGGGTTTTCAAGAAAAGTTACAAAAAAATCATTCGACGTTTAATTTAGTACCGATGAGGTTTGAAATCGATCAATTGAATTTAGAAGATCCTGTAATCGATTCTGTTAGTGAAATTATTAATTCAACATCCGATAACGAATCTGACCCGCTCGCCTTGGCAAATTTATCACTTGAGAATGATGAATCGGATCCGTTGGCTTTGGAGAATCCTCTATTGGATTCTAAAGCGGATTTGAAAATAATAGCTGAATCTGAAAGTCAAGATTTTGAAACTAAAGATTTGAAAAATGACGATTCTGAAACTATAACAGCTTCTGAAACTGAAAATTCTGAAATTGAAGAGTCTGAGAAATCGTTAATGAGTACAAATGAATATGTTTCGAAATTCCGATATTTCTCACGAAAAGCATCCAATGTTGTTTTAATTGAAGAAGGTGTAAGTAAAATAGGTTTGTTACAGAAAAAGGAAGATTCGAAAAATTCGAGAGAGGTGAAAAGGATTGGAAGTTACTTTTTTTGTACAATATGTAAAAGGCCAATTTTGTTGCGTTTGAAAGTTGAGCACATGAAGATTCATGACGAAGGTTTGAAGATGTTTGAATGCAGCATATGTGAGAAAAAATTTAATACCCGGGCGAGTAGAAAAAGGCATGAATTTACTCATACGAAAAAGCTAAACAGTAGTTAA
Protein Sequence: MGESSLQDFQRCRLCALPFSSNSLIAFSNTIYEPMIDKLRPFGVNIKRDDGLPESICNGCTSILETFIETMELFLEADKKFKKLLEASKPTIIEKPIHEKRKSIKSTEDKETKGLKRKVEEEVVEIKRTKRRDHLNLLRKMRTPAANHSKDVDGKSTKEKCKEIANAKNDLIEQTEIKNNKDSGVRQKQERKQTLETRESEEDSENNISDEVTAVNVTEKQDHDYSLDADFNVTDKTGARNNSNDKEEIDISQESDHETRNKQIPLKPVKILTIDRKCLPEKDKVNLPGTSNPVSRIYTQPSDDKEIDIFICLECHQLSWNRETTLEHIYKQHAGGALTYKARYMVKRINHTKGYNSQKQIVCMLCYFTFSDSDFTSYLEHLTGHYMAMYKCVHCAQNFSSKEALEKHKRLYKNDIITCKICNESMALEFYAGHQRSHSLSSRTLSKIKKKALKRKESKLLKQSKEKSKKSVQINDNEKGREKILKNPNTLLKSKTAVESDLETVIIDGEVQIDEIKCKDNENSSKTDDEIQEISQEKSSNITQKKRDPCFYKCTNCLRIFQDRGTILKHIQRIHPLIWGNKKSLLGAKKLKSEDQEEDANEIYMCRICPVDFDNDSTYFQHLKMNHHCNKCTKTFYDKEEMNKHLRAHEKRLHICELCDASFYVEKNYLDHKLTHNHNCELCKSSYRSYESLVNHKKLSHPKISCPICLLSFDSPALLSKHDAMHSKKKTPTLCELCGKSYTKSKKKVNAKENLNSEVQIGRFEEITVQEENHEIDPEMESAVKNKEILSIIRESNENDKEEFDTFVEDGENQEEAEDIESDTGEPDTYQKSFSQYLKNLNDSRNENIIPKNQKLKRNNKTWIQESLPKKKRTEIPTPISSTEEIQEICTITTPGRLIPPENSEYPFSVEKSIPYSKIEKEIFLFECARCGRNFVSRRAILEHLMKKHSDEFRLWETLYTKKKLEDKKPNAKTFNNASMCSDDLNIQYVCSNCDKTFSSKNLLKTHKCELICRLCDKHFVFRNNYIEHLKTHENDCEICKKQFISESFLTIHRKSAHPEGICYVCHRWFSTETLLKDHKTIVHNLSVMTFFCLICEKNVYSEKKFRAHMETHGNKRPFPCPHCGRSYARYFAMASHTERCKEFDETNIFECDICKKAFYNKEKFIPHMKQHIKNNKILEDAEVKDEKVQKLVSNTQVSKHLLQKIPSSKLKDSKNSEKNKILPTPSLKNKNLKSLHFGPKIVWRESTIQTSLLNKLEKRRERQGERKQDRNVTDRPLQRDKNSNHFPEMRFKLKKRVEMMEIKQSENNTSLVPKEKPAGGNCKEQSIEKLLILRPITKVTMEGNFESGNEIIKLDLGFQEKLQKNHSTFNLVPMRFEIDQLNLEDPVIDSVSEIINSTSDNESDPLALANLSLENDESDPLALENPLLDSKADLKIIAESESQDFETKDLKNDDSETITASETENSEIEESEKSLMSTNEYVSKFRYFSRKASNVVLIEEGVSKIGLLQKKEDSKNSREVKRIGSYFFCTICKRPILLRLKVEHMKIHDEGLKMFECSICEKKFNTRASRKRHEFTHTKKLNSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -