Basic Information

Insect: Synergus itoensis
Gene Symbol: -
Assembly: GCA_904066005.1
Location: CAJFCP010000075.1:1230103-1235572[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.072 9.9 7.6 0.5 3 23 72 92 70 92 0.94

2 24 0.00027 0.037 15.3 0.5 1 23 98 121 98 121 0.96

3 24 0.00011 0.014 16.5 0.1 1 23 193 216 193 216 0.96

4 24 0.0072 0.98 10.8 0.4 1 23 222 245 222 245 0.96

5 24 0.11 15 7.1 1.5 1 23 258 280 258 280 0.97

6 24 3.2e-05 0.0044 18.2 0.9 3 23 325 346 324 346 0.96

7 24 0.74 1e+02 4.4 0.7 2 23 409 432 408 432 0.92

8 24 2.8 3.8e+02 2.6 0.0 2 23 441 463 441 463 0.84

9 24 0.17 24 6.4 0.1 2 23 470 492 469 492 0.93

10 24 1.2e-05 0.0016 19.6 1.2 1 23 500 522 500 522 0.98

11 24 0.61 83 4.7 0.9 1 23 554 578 554 578 0.92

12 24 0.00019 0.026 15.8 3.3 1 23 581 604 581 604 0.97

13 24 0.0032 0.43 11.9 0.8 2 23 611 633 610 633 0.95

14 24 0.34 46 5.5 1.1 1 23 674 697 674 697 0.94

15 24 0.0071 0.97 10.8 2.8 2 23 704 727 703 727 0.94

16 24 9.4 1.3e+03 1.0 0.2 2 23 735 757 735 757 0.92

17 24 3.3 4.5e+02 2.4 0.0 2 23 764 786 763 786 0.87

18 24 0.2 28 6.2 2.7 2 23 795 817 795 817 0.96

19 24 0.34 47 5.5 1.0 2 23 823 845 822 845 0.93

20 24 0.0014 0.19 13.0 0.5 1 21 945 965 945 966 0.96

21 24 0.29 39 5.7 1.9 2 23 1063 1085 1062 1085 0.94

22 24 0.29 39 5.7 0.3 2 23 1092 1114 1091 1114 0.94

23 24 0.27 37 5.8 1.8 1 23 1125 1147 1125 1147 0.97

24 24 0.0077 1 10.7 0.4 3 19 1156 1172 1155 1174 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.072	9.9	7.6	0.5	3	23	72	92	70	92	0.94
2	24	0.00027	0.037	15.3	0.5	1	23	98	121	98	121	0.96
3	24	0.00011	0.014	16.5	0.1	1	23	193	216	193	216	0.96
4	24	0.0072	0.98	10.8	0.4	1	23	222	245	222	245	0.96
5	24	0.11	15	7.1	1.5	1	23	258	280	258	280	0.97
6	24	3.2e-05	0.0044	18.2	0.9	3	23	325	346	324	346	0.96
7	24	0.74	1e+02	4.4	0.7	2	23	409	432	408	432	0.92
8	24	2.8	3.8e+02	2.6	0.0	2	23	441	463	441	463	0.84
9	24	0.17	24	6.4	0.1	2	23	470	492	469	492	0.93
10	24	1.2e-05	0.0016	19.6	1.2	1	23	500	522	500	522	0.98
11	24	0.61	83	4.7	0.9	1	23	554	578	554	578	0.92
12	24	0.00019	0.026	15.8	3.3	1	23	581	604	581	604	0.97
13	24	0.0032	0.43	11.9	0.8	2	23	611	633	610	633	0.95
14	24	0.34	46	5.5	1.1	1	23	674	697	674	697	0.94
15	24	0.0071	0.97	10.8	2.8	2	23	704	727	703	727	0.94
16	24	9.4	1.3e+03	1.0	0.2	2	23	735	757	735	757	0.92
17	24	3.3	4.5e+02	2.4	0.0	2	23	764	786	763	786	0.87
18	24	0.2	28	6.2	2.7	2	23	795	817	795	817	0.96
19	24	0.34	47	5.5	1.0	2	23	823	845	822	845	0.93
20	24	0.0014	0.19	13.0	0.5	1	21	945	965	945	966	0.96
21	24	0.29	39	5.7	1.9	2	23	1063	1085	1062	1085	0.94
22	24	0.29	39	5.7	0.3	2	23	1092	1114	1091	1114	0.94
23	24	0.27	37	5.8	1.8	1	23	1125	1147	1125	1147	0.97
24	24	0.0077	1	10.7	0.4	3	19	1156	1172	1155	1174	0.94

Sequence Information

Coding Sequence: ATGTCGAGTAACGATTCGACCAACGAGACTAAAGATTACAAGAACGCTGAGGCTAAACTTGCAAAAAATCCTCAGCTTACAATTCTTAAACAGGCGCTCACCAAAGGGGACATTTTGAAGAGAAGCTACGATGAAAAATACAAGACTAGTTCCAAAACCAAAAAGCAAGCAAAAATCGATAGTAATGATATTGATGTAAACAAGCGGTGGTTCTGTGAATCCTGCCCCCAGAACTTTACCTCGTTCGACAGTTTCAAAGAACACGAACTTTTACATGAAGCTGAAAAACCCTATTTTTGTTTATTATGTGAGAAAGATTTCGCTCAAAAATCTTCCTTAAGTAATCATATTGTGACTATGCATGGAGTTGATCCCCATCCTATCATCGACAGCGATAAGTGTTTAAAAAAGTCTGTTTTATCTCATGGATGGAATAAAAAATCAGAGGCTACGAACGGAGAACCCAATCTGGTCATCAAAAAAGAGGACGTTTCTTCGCCTTATCCCGAAATATCTATAGAAAACGAAGAAGAACTGCCAAGTAGCCAAGACAAGATTATCGAAATCGACACAGTCTTCGTTTGCGAAATCTGTACTCGAGATTTTAACGACAGAGCATCCTTGTGGCTTCATATCCGAGCCACCCATAAGGAATTCGCCGCCTTTGCTTGCGGAGTCTGTTTAAAAATCTGTTCTGATAACGCCCAGCTGCTCAACCATGTGAATATGTATCACGGAGGTTCCAAACTTCTCATGTCTGAGCAAAGGCGCTACAGCTGTACAATTTGCGGAAGACAGCACGATTCTCGAAAAAAGTTAATCACCCACGTTTCGATTCACAACGTGGATCCCAGTTACGATCCTGCGAGTTTCGTTCAACTCAACAGCAATTATTACAACGAAAATCTAAATAGCAACGAAGCCATCGAGCAACCAGTTGATGGCGATGTCGAGGATGGAGAGAAAGTTGACTGCTACATCTGTTACAAATCATTTCCCAACGAAGATCATCTTATCAGGCATCAACGAAATGCTCATAAATCCGATCCAGCGGTAGTGATTGGAGAATCCGCAGCGAATGGCAGTGGATCTGGGTCTAATGGAAATGGAAATAGAGCGCAGTATCATTTATTCTACATCTGCGAACTTTGCGGCAATTCGCATCCCAGTAAATGGGAACGTTGGCTACACGTTTCCAGTATTCACGGAGACGATCCAGAAATCAAGTGTGAGAGGCCAGATTGTGCGAAGATTTTTGCGACAAAGACTCTTCGAAACGAACACGCTCAGCATCATTTAATGCAAGGTAGTTCGCCAAACACTTGTGAGATCTGCGGGAAATTGTGGGGAAGCCGAGTGGATTATTGGAAGCACGTGATGGGAGTTCACTCAGATACTGTTCCTCTAATCTGTGGAGTTTGTCTTAAAGTATTCCCTAATGTTCTTCAGTTAAGTTCTCACGTGAAGCAGAAACACTGGCCTTTAACAAATGGTGATTTTAGTTGTGATATTTGTGGCAGGCCTTATTCCAACAAGTCCAAAATGTCCAGGCACAGGAAGATTCATGGCCTCGATGGCGAGGGTCACGTGCTTCCAGATCCTAGTGAATACATCAACGATTCAGGGAGACTTGACAATGGAGAAGCCATGGAGGTTGATTTCAGTTGTGAAATGTGTGGAGATTTGAAATTCCTGACCCTAGAAGACCTCTGCAATCATCGAAGAATTATTCACAACCTTTTCCCCTGTGATTTGTGTAACAAATGTTACGGTAGAACTTCGCACTTGTGGAAACATGTTAATCGGGTTCACAAGGGTCACAAGGACGTCACCTGTCGGTTCTGCAAGAAGACGAGCGCTTCAAGAGATCACTTAGCAGCCCATATTGCTAAAATTCATAGATACAAGTCTGATGTGAAAAACGATACAAGAGAACCTGTGAATTTCAGGGTCGCAGCTCCTGAAGACGAGGCTCTTCACCATTGTGACAGATGCAAGAAGGACTTTTACAAACGTAGTTACACTTGTCATTTATGTAACGAAACGATAACTTCGAAGCTGGGGATCATGACTCATAATCGGATTAACCACATGGATCATCCAGATCTTACATGCGAACTCAGCCATTGTAAGAAGCTTTTCCGCACAAAGGAGGATCTTGAATCTCATAAAAAGGATCACAGGATTCACACAACACCGAATGTTTGTGATTTCTGTGGAGACACTGCCGAAAATAAACTTAAATTGAAGATGCATGTTTTGTCCTTGCATCGAAACGAAATCGGTGTTTCTTGTGGAGTCTGTCTTATTCCGATGAAAGACCCGAAGGATTTGAAAAAACATGTGGAGGACACTCACGGAAGTATACTTTCAAAGCCAAATACTTGTCAGGTTTGTGGAAAGCAGTATGCATCGAAGTGGAAAGCCTTTGATCATACGAAGAAGTGCCATGGAAAGGTTTTTAAGACCTGCAAACAATGCCTGGCTGTGTTTATTACCGAAGAAAGTATGAGGAATCATTATGAACACGTTCACAACGTTCCAAAAGACCAACTAGCTACATTCGAATACCGCCTCGAAATCGGACGCAAGCGTCACTACGATAACTTGGAAGTCGTAATGAAAGAAGAGCCTGAGGAATTGGAATTTGATGAGGAACCGACAGAGGATTATTCGAATGATTATAAGAAAAGAATATCTGATTCTGATGACTATGATGCTCGAGCTGATTTCTATGCAAGGATGAACATCGAGCAGGAGGAACAAATGCAACCTTTGAAAAAGATAAAGCTGGACTCAAAGGCTAAAAAGAAATTAAAAGATCGACAAACTTACGAGTGCGAGAACTGCAAGATACAGTTTAATACCAAGACTCAATTTTGGAATCATATTAACCTTTGCCCAAAGCGAAATATGATTACCAAGGAGGAAGATATAAGTTTCCCAACTTCGATTCTTGAGGCGCACTTAAAGAATAATAATCAGATTAAGAGAGAGGAACCTGAACAGGAACTTGACGAGAATAACTTAAACATTCCAGACTTCAATCTCTTTGAAGATATCAATATGCAGTTATCAGGTCAGAAACCAGTTCAAAATCTTTCGCTTAAATCTTCCTCGAGTAGTAATAAATGTTCGAGGAAGGATTCACGGAAAGTTTACGATGAATCTACAAACACCGAGTGTACTTGCGAAGTTTGTGGGAAGCAATGGCCGGCGAAGAAGCACCTGTGGCAGCATTTGATTCGTTTTCATCGAGCAGAGGCTGCTGTAACATGCGGGGTTTGCCTGAAACTTTGCACAACTTATGATGACTTGGCTTATCATCTGAAAGCTGCTCACGAGGCTTTGCTATCTTGTGAGGGGAACAACTTCACTTGTAAGGTTTGCGGAAGGTACCACAATGCCAGGAGCAAATTGTTGTTGCATATGAGCATTCATATCAACTGCAAAAATAATCCGATGTGCAAGAAGTGCAAACGCAGCTTCGAGACGGAGGAAAAATTGAAAGAGCACGTTGGGAATTGCGAGGGAAGACAGTCGGGACTGGGAATCAGACATGATGCAGAAGATGTGAAGAATGAAGACAACGATGAAAATGAAGATAATGACGAGAATGATGAAAAGGGAAGTTTTATTGGTGATGAGGGAGACGAGAGGGAAGAGAAGGAAGGAAATTATGGATCGGGAGGAGAAAAGGGTTCTGATAATGAAGATAGCAGCTCGGATGATTCTGCAGATTCAGGAACGGATAGTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTAGCAGCTGAATCAAGAACTACAAGTAGACTCGGGGAACTAAGTTGCACGAGTGATAGTGATGAAGACTCAGACTCGGAAGCCCTTGAGGATGCTGCCGAGATTAAATCTAATGTAAGGTCTGAAGATGGTAGAGAAAATTTAGTGAACAAAGATGTAAAAATAGAAGGCATAGGAATTGAGTCTACTTTGGTATTGTCCGATTCCGATACAAAAGATTCTACAGCATTTGGAGGGTTGGAGAACAAGCTGATGAAGATTGAAACGAATAATATGGATTATTCGGATGATGAAGGTCCTCCGGTTTTGAGTCCAATGATGCCGTTATTACCACCACAAGAGGAAGATATGAATAGTCAGATGGATGAGATGAGTCATAAATTGAGTCCGATGGTCACTTTGGAAACAAAGATGGAGCAGGAAATGCAGGATTGTAATTTTGAAGATATGCAGATCAACTACCAGAATATTGAAAATAAGAATCAAACGAAGAGTATCAATTTAGAGGAGTCTGAAGATTCAGAGTCTGAGAGTGAGGATGAAAATAAAATGTGTATCTATGAAGAAGCTGGGAATCGAGAGATAAAAATAGAAGGCTCAAGTGCGATCAGTGACGATGAAGAAGATGCAGAAATGCAGGAAGAAAACAAGGAAGAGGAAATTGCAGAAGAGAAAGGAGCGGAAGTAGCTTCTGCAGAATCTGAAGAAGAAAGTGAAAACGAGGAAATAGAAGAGGAAGAGGAAGAAGAATCCGAAGTTGAAAGCGAGCAGGTCCAAATTGCAAACCACGGTAGTCCCGCAACAATCGATCACTCAGAAACACTTTCACAAGATCTTGAAGGGGAAGTTTCAGACCAAGAAGAGGTTGAAATAGGTGAAGAAGATGAAGAGGAGGAAGAGGAAGAAGTTGAAGAAGAGGAACCAGAAGAGAACTTCACAAATGAAAACGCTGAAGTTGAAGAGGAACTAGCCGAGAATAATTCTCTTATGGAGGAAGAAGTCATAGGAGAAGAAAACTACGAAGATGAAGCGATGATGGACGACGAAATGAACAACGAAGATCATTCCTTGCAGAATTTAAATAAAACCATCCTCACTGTCGGGAAGGATTCTGAAGGTAATCCCATCTTGATTCACGAAGTAGTAACTGAATATCCTTATCAGGACGAATACGATTGCGAATCTGAATATCCAAATGTTTCACATGAACAAACTCCTCTTTTTAATGCCGACGAAAATCAAAGATTATCGGGAGAAAACTTTGGCTTAAATAGTGATAGCCTCGACCAAACCATGACTGAGCCAGAAGTACAGACGGTAGATGAATTAGATCATCACGAGGAGGTGGAGACCGATGAACAGGTCGAAGACAAAGCTGATAGTGATATCGAAGAGTCAAGAACGAGTGCCAAAAGTTAA
Protein Sequence: MSSNDSTNETKDYKNAEAKLAKNPQLTILKQALTKGDILKRSYDEKYKTSSKTKKQAKIDSNDIDVNKRWFCESCPQNFTSFDSFKEHELLHEAEKPYFCLLCEKDFAQKSSLSNHIVTMHGVDPHPIIDSDKCLKKSVLSHGWNKKSEATNGEPNLVIKKEDVSSPYPEISIENEEELPSSQDKIIEIDTVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPSYDPASFVQLNSNYYNENLNSNEAIEQPVDGDVEDGEKVDCYICYKSFPNEDHLIRHQRNAHKSDPAVVIGESAANGSGSGSNGNGNRAQYHLFYICELCGNSHPSKWERWLHVSSIHGDDPEIKCERPDCAKIFATKTLRNEHAQHHLMQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLSSHVKQKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEGHVLPDPSEYINDSGRLDNGEAMEVDFSCEMCGDLKFLTLEDLCNHRRIIHNLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCRFCKKTSASRDHLAAHIAKIHRYKSDVKNDTREPVNFRVAAPEDEALHHCDRCKKDFYKRSYTCHLCNETITSKLGIMTHNRINHMDHPDLTCELSHCKKLFRTKEDLESHKKDHRIHTTPNVCDFCGDTAENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDTHGSILSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFKTCKQCLAVFITEESMRNHYEHVHNVPKDQLATFEYRLEIGRKRHYDNLEVVMKEEPEELEFDEEPTEDYSNDYKKRISDSDDYDARADFYARMNIEQEEQMQPLKKIKLDSKAKKKLKDRQTYECENCKIQFNTKTQFWNHINLCPKRNMITKEEDISFPTSILEAHLKNNNQIKREEPEQELDENNLNIPDFNLFEDINMQLSGQKPVQNLSLKSSSSSNKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTTYDDLAYHLKAAHEALLSCEGNNFTCKVCGRYHNARSKLLLHMSIHINCKNNPMCKKCKRSFETEEKLKEHVGNCEGRQSGLGIRHDAEDVKNEDNDENEDNDENDEKGSFIGDEGDEREEKEGNYGSGGEKGSDNEDSSSDDSADSGTDSSXXXXXXXXXXXXXXVAAESRTTSRLGELSCTSDSDEDSDSEALEDAAEIKSNVRSEDGRENLVNKDVKIEGIGIESTLVLSDSDTKDSTAFGGLENKLMKIETNNMDYSDDEGPPVLSPMMPLLPPQEEDMNSQMDEMSHKLSPMVTLETKMEQEMQDCNFEDMQINYQNIENKNQTKSINLEESEDSESESEDENKMCIYEEAGNREIKIEGSSAISDDEEDAEMQEENKEEEIAEEKGAEVASAESEEESENEEIEEEEEEESEVESEQVQIANHGSPATIDHSETLSQDLEGEVSDQEEVEIGEEDEEEEEEEVEEEEPEENFTNENAEVEEELAENNSLMEEEVIGEENYEDEAMMDDEMNNEDHSLQNLNKTILTVGKDSEGNPILIHEVVTEYPYQDEYDCESEYPNVSHEQTPLFNADENQRLSGENFGLNSDSLDQTMTEPEVQTVDELDHHEEVETDEQVEDKADSDIEESRTSAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -