Basic Information

Insect: Synergus itoensis
Gene Symbol: -
Assembly: GCA_904066005.1
Location: CAJFCP010000114.1:280806-285497[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.024 3.2 9.1 1.8 1 23 351 373 351 373 0.97

2 18 0.071 9.7 7.6 1.6 2 23 431 452 430 452 0.94

3 18 3.6e-05 0.0049 18.0 2.2 1 23 505 527 505 527 0.98

4 18 0.017 2.3 9.6 1.1 2 23 531 552 530 552 0.97

5 18 4.4e-06 0.0006 20.9 1.2 1 23 601 623 601 623 0.93

6 18 0.00057 0.077 14.2 0.8 1 21 629 649 629 653 0.92

7 18 0.00047 0.064 14.5 3.5 2 23 721 742 720 742 0.95

8 18 3.9e-05 0.0053 17.9 3.8 1 23 793 815 793 815 0.97

9 18 0.00052 0.07 14.4 1.1 1 20 820 839 820 841 0.94

10 18 0.045 6.1 8.3 0.3 2 23 852 873 852 873 0.97

11 18 2.7e-05 0.0037 18.4 0.6 2 23 912 933 911 933 0.97

12 18 2.5e-05 0.0034 18.5 1.6 1 23 938 960 938 960 0.95

13 18 0.00014 0.019 16.2 2.9 1 23 966 988 966 988 0.98

14 18 4.4e-06 0.0006 20.9 0.4 1 23 1004 1026 1004 1026 0.95

15 18 2.4e-07 3.3e-05 24.9 0.8 1 23 1032 1054 1032 1054 0.99

16 18 9.9e-05 0.013 16.6 0.2 1 23 1060 1082 1060 1082 0.98

17 18 0.00073 0.1 13.9 4.2 1 23 1088 1110 1088 1110 0.96

18 18 0.01 1.4 10.3 0.4 1 20 1116 1135 1116 1137 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.024	3.2	9.1	1.8	1	23	351	373	351	373	0.97
2	18	0.071	9.7	7.6	1.6	2	23	431	452	430	452	0.94
3	18	3.6e-05	0.0049	18.0	2.2	1	23	505	527	505	527	0.98
4	18	0.017	2.3	9.6	1.1	2	23	531	552	530	552	0.97
5	18	4.4e-06	0.0006	20.9	1.2	1	23	601	623	601	623	0.93
6	18	0.00057	0.077	14.2	0.8	1	21	629	649	629	653	0.92
7	18	0.00047	0.064	14.5	3.5	2	23	721	742	720	742	0.95
8	18	3.9e-05	0.0053	17.9	3.8	1	23	793	815	793	815	0.97
9	18	0.00052	0.07	14.4	1.1	1	20	820	839	820	841	0.94
10	18	0.045	6.1	8.3	0.3	2	23	852	873	852	873	0.97
11	18	2.7e-05	0.0037	18.4	0.6	2	23	912	933	911	933	0.97
12	18	2.5e-05	0.0034	18.5	1.6	1	23	938	960	938	960	0.95
13	18	0.00014	0.019	16.2	2.9	1	23	966	988	966	988	0.98
14	18	4.4e-06	0.0006	20.9	0.4	1	23	1004	1026	1004	1026	0.95
15	18	2.4e-07	3.3e-05	24.9	0.8	1	23	1032	1054	1032	1054	0.99
16	18	9.9e-05	0.013	16.6	0.2	1	23	1060	1082	1060	1082	0.98
17	18	0.00073	0.1	13.9	4.2	1	23	1088	1110	1088	1110	0.96
18	18	0.01	1.4	10.3	0.4	1	20	1116	1135	1116	1137	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTAGAGATAAATACGTCGGAGCCACCGCAAAATGAGGAGGGAATTGTATCTGAAATGGAAATATGTCGTGTTTGCCTTCTTGGAAACGTTGTGATGAGAGACCTGTTCCACGAGAGCGAAGTGAACTCTCTATCTGTTAAAGCCATGAGCTTCGCCAGCGTTAAGATGGTGCCAGGCGACGGACTGCCAGGACAGGTATGTTGCGTTTGTGCAGACAAACTGGAATCAGCATACGAGTTCAAATTGCAAGTCGAACAAGCCGACAGTGTTCTCAGAGAAAAATTTGATGCACTTAACATTAAAGAAGAACTATTTTTCAACGATGTCGAAGTTCATTTGGAAGGAGAGAGAACTCGCACGAGGCGTGAAATAAATGACAATGGTGAATACGTGGAGACAACCGAAACATTGCATGATGATGGCAGAAACACACTTTTGAAGGATCATCTCGCTCTTTTACAAGTTCAAAAACTGTCAGAACAAGAAAGCATGTTACAAGAAGAAGAAATCATACAAAAAGATGATCTACAAGAAAACGATATTGTGAACGTAAACAAGCAGTCTAATCAAGAACTCTTGCAATTAGAACATATTTCGCAAACCGTGCACCACTTTGTCGATCAGAGCAACGTCAAGCATGAAAGACTTCATGAAACAGAATCTGTAAACATGCAACAGCAAAGTTATCTTGATCAACAGGATTGTACTCAGATGAGTGACGATGATTTCAACAATGACGAACCTTTCGCAGTTACTCAAGAGTCTATGGAATATTCTTCGTCCTCAGCTAAAGAAAGAGAAACCGAGCAAGAACAAGCCCAAGACCAATTTCAGCAATCTACAGAAGACACGCCCACCGAACAAATAAATCTAAACTTGGAAGAAGAATCTCCTCAGAGTGAAACACGCAGAAGCAAACGCAAAATTGCACGTCGCTCTACTGGTTCTGAACACAACTCCGACGAAGAGAATTATTTCGAAAATCTAAACCTTAGTTCACGACTGAAGAAGACTCAGATGGATAAATCAGAGAAAATCTTTTTTATGTGTTACCTCTGTGACAAAGAATTCCTCTCTAAGGGAGTTTTGAAAGAACACATGCACTCTCACGAGGAAGTGAGAAGGACCCTTTCCTTGAAAAAAATGGAAGAAAAGCCTCAAAAGACAGCGACACCTCAAAAAACAGCAGCAACACAGAAACTATCCTCTACATCGAAAACCTCTACTCCTCAGAAATCTGCTACTCCTTTGAAAACGCCACCATCGGGAAAGAAACTGAATAAATGTCCTCATTGCGGAAAAGAGTATCTCTACATAATTTCATATAATAAGCATTTGAAGCAACATGAAAAAGAAACCAGGGCAGTCAAGAGCGAGTCAATGCCACTGACGGAAATTTACTTCCGTGAGGATGAAGATTCTGATGACTTTCATGGGTATACAAACACTCCCGCTATTACTGGAAATTATTCAGATTCAGATGAGCAAGGGAAGGAAGAAGTTTATCAATGCAACAAATGCTCAGAGAAGTTTAATACAAAACGAGCACTTCGAAAACATGCTATTAAACATACAAATTTGAAGTGTTCCGTTTGTGAGGAGAAATTCGATTCCATGGAAAAGATGAAGGAGCACCGAATGAAACACGTGGAAGAAGGGGTTTTAACGGGAGAAGATTTGAAGAAGGACCTTGAGAACTTGAAAGATCTTTTACAGGATGAGGAGGAAGATGAACAAACAGGAGATAAAAAGTCTCTTTCGAGAAATTCCGAGACTAATACAGGCAACAAGTATAGTTGTAAAATTTGTGGACAAGAGTTTTCGAGAAAGGAGCAGTTACAAAAACACTCGGATCAGCACGAGAAAGTAAAGTCCTTCAAGTGCACTCAGTGCAATAAAACCTTCGGTAATGAACTCACATTACGTAATCATTTGATAGCTACTAATCACAAGACGATTTTGCATGGTCAAGAATACGACCCGAACAAGAGAATTAAACGAGTTGCGGCAAAGGCTGCCCAGAAGATTATCGACAAAATTAAAATTGAAAATGAGAGTGATTACGAGGAGGATGATAAAAGTAAAAAAGACAGCAACTATCAGGAGGAATCGAAAACTCCAGGTAAAAGGACTTACAATAAAAAGGTTCTGGAATGCGCGACCTGTAATAAAAAATGCAGTTCTAAACAATCCTTGACAAAACACATGGAACAGCACGTCAAGGATGAAAAGGGAGATAAAGAAAAGATAGATAAGATAAAATCAGAGAGGTCAACGAAACAAGATACTAACAGATCACTAGATGACGATGATGACGATGATCTCGATGATGATTTCGAAAGTGGTCTGGATTGGCCGATGGACACTCACGAGTGTCCCACCTGTAAAAAGAGATATAGTACCAAGAAATCTTTATTAAGACATCAACTTTTACACGAGGAGCCGAACTTTGAGTGCGATATTTGCAACGTTAAGTTCTACCGCAAAGATAAACTTAAATCCCACTACGACAAATGTTCAGAGAAAAATCCCGATCAGGTGCGAAAATGCAACATCTGCGGGGACAGTTTCGAAAATAATGAAATTCTCCGTGAGCACCGAGCAAAGCACGTGACTGAAGGTATTTTGACGGAGGAGGATTTGAGGGAAATCGAGCCTAGACCCGAGGAAAGAAAATCAGGAGAGAAAGTCGCAAGGAAGAGAAGAACAGATATTGTTGGTCTCGAGTGTACAGAATGCAATAAACAATATACTTCTAGAAAGGGACTTTTGCGACATATCCAAGTTCACGAAGGAAAGAAATACCTCTGCGATATCTGTCCAAAGAAGTTCTACAGAAGAGAACATCTGAAGATTCACGTAGCGAAACACAACATGCTCAAGCCTTATAAATGCACGCGTTGTACAAAGCGTTTTATTAAAGAAGAACAACTAACAAACCACCTTTCGAAACACGACAGGACCTTTAAAAAGAACAAGGAAACTGACAGTTCAAAGAGATTCCTCTGCGAAATATGCTCGAAGAGCTTTACTCAATCAACGACCTTGATTGCGCATCTCAGAGCGCACAACGGAATAAAGCCTTACGTTTGTGAAGTTTGCAAGAGACCTTTTACAACAAATGCTTATCTCAAGATGCATATGAGAACTCACACGCAGGAGCGACCTTATGTTTGTCAGTTCTGTTCGAGGGCTTTCGCCAGAGCTGATACTTTGGCTAATCATCTGACTTCTCATACTGGAGAGGCCAAGTATCACTGCAAGTTCTGCCCGAAGAACTTTAGAAGATTGAAGTCGTTGAAGGAACATGTTTTTATCCACACGGGACAGAGACCTTATGCTTGTCCCACTTGTGATCGCAGGTTCAACAATAATGGAAGTAGATACGCACATAGTAAAAGGTGCAAACAAAACATGCTGCAGAATCAGAACCGCGTTCAAGTCGTAGCACCAGAAATGCAACCGAGGTTACATCAAGCCCTCACCCAGCCGCCTATAATTAAATCGCAGAATATCAAGACGATAACGATTGCTAGACAGGACCCCCTGACAGCTCAACAGGTTCTGCAACATCAGGAACTTCTGATGCCACTCATTTTACCCCTGACAGTGACTCTCGCCGATGTAGGAGAAGAAGTTATTTTACCGGAAGGTACCAAAATCTTCACCACGTCTTAA
Protein Sequence: MDAVEINTSEPPQNEEGIVSEMEICRVCLLGNVVMRDLFHESEVNSLSVKAMSFASVKMVPGDGLPGQVCCVCADKLESAYEFKLQVEQADSVLREKFDALNIKEELFFNDVEVHLEGERTRTRREINDNGEYVETTETLHDDGRNTLLKDHLALLQVQKLSEQESMLQEEEIIQKDDLQENDIVNVNKQSNQELLQLEHISQTVHHFVDQSNVKHERLHETESVNMQQQSYLDQQDCTQMSDDDFNNDEPFAVTQESMEYSSSSAKERETEQEQAQDQFQQSTEDTPTEQINLNLEEESPQSETRRSKRKIARRSTGSEHNSDEENYFENLNLSSRLKKTQMDKSEKIFFMCYLCDKEFLSKGVLKEHMHSHEEVRRTLSLKKMEEKPQKTATPQKTAATQKLSSTSKTSTPQKSATPLKTPPSGKKLNKCPHCGKEYLYIISYNKHLKQHEKETRAVKSESMPLTEIYFREDEDSDDFHGYTNTPAITGNYSDSDEQGKEEVYQCNKCSEKFNTKRALRKHAIKHTNLKCSVCEEKFDSMEKMKEHRMKHVEEGVLTGEDLKKDLENLKDLLQDEEEDEQTGDKKSLSRNSETNTGNKYSCKICGQEFSRKEQLQKHSDQHEKVKSFKCTQCNKTFGNELTLRNHLIATNHKTILHGQEYDPNKRIKRVAAKAAQKIIDKIKIENESDYEEDDKSKKDSNYQEESKTPGKRTYNKKVLECATCNKKCSSKQSLTKHMEQHVKDEKGDKEKIDKIKSERSTKQDTNRSLDDDDDDDLDDDFESGLDWPMDTHECPTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKSHYDKCSEKNPDQVRKCNICGDSFENNEILREHRAKHVTEGILTEEDLREIEPRPEERKSGEKVARKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMLKPYKCTRCTKRFIKEEQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCKRPFTTNAYLKMHMRTHTQERPYVCQFCSRAFARADTLANHLTSHTGEAKYHCKFCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNMLQNQNRVQVVAPEMQPRLHQALTQPPIIKSQNIKTITIARQDPLTAQQVLQHQELLMPLILPLTVTLADVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00980354;
90% Identity: iTF_01390523;
80% Identity: -