Basic Information

Insect: Synergus itoensis
Gene Symbol: -
Assembly: GCA_904066005.1
Location: CAJFCP010000059.1:3905293-3907196[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.21 29 6.2 0.5 2 23 124 145 123 145 0.96

2 15 0.021 2.8 9.3 0.2 2 23 150 171 149 171 0.97

3 15 5e-06 0.00068 20.7 1.1 1 23 177 199 177 199 0.97

4 15 3.6e-07 4.9e-05 24.3 0.4 1 23 240 262 240 262 0.98

5 15 1.8e-05 0.0025 19.0 1.3 1 23 268 290 268 290 0.98

6 15 1.7e-06 0.00023 22.2 2.1 1 23 296 318 296 318 0.97

7 15 7.7e-07 0.0001 23.3 1.7 1 23 324 346 324 346 0.95

8 15 3.2e-05 0.0043 18.2 0.6 1 23 352 374 352 374 0.98

9 15 1.9e-05 0.0026 18.9 7.2 1 23 380 402 380 402 0.97

10 15 1.9e-07 2.5e-05 25.2 0.8 1 23 407 429 407 429 0.97

11 15 5.6e-05 0.0077 17.4 1.1 1 23 435 457 435 457 0.97

12 15 1.7e-06 0.00023 22.2 5.8 1 23 463 485 463 485 0.98

13 15 1.2e-06 0.00017 22.6 1.3 1 23 491 513 491 513 0.98

14 15 5.4e-06 0.00074 20.6 0.9 1 23 519 541 519 541 0.99

15 15 2.7e-05 0.0037 18.4 1.0 3 23 549 570 548 570 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.21	29	6.2	0.5	2	23	124	145	123	145	0.96
2	15	0.021	2.8	9.3	0.2	2	23	150	171	149	171	0.97
3	15	5e-06	0.00068	20.7	1.1	1	23	177	199	177	199	0.97
4	15	3.6e-07	4.9e-05	24.3	0.4	1	23	240	262	240	262	0.98
5	15	1.8e-05	0.0025	19.0	1.3	1	23	268	290	268	290	0.98
6	15	1.7e-06	0.00023	22.2	2.1	1	23	296	318	296	318	0.97
7	15	7.7e-07	0.0001	23.3	1.7	1	23	324	346	324	346	0.95
8	15	3.2e-05	0.0043	18.2	0.6	1	23	352	374	352	374	0.98
9	15	1.9e-05	0.0026	18.9	7.2	1	23	380	402	380	402	0.97
10	15	1.9e-07	2.5e-05	25.2	0.8	1	23	407	429	407	429	0.97
11	15	5.6e-05	0.0077	17.4	1.1	1	23	435	457	435	457	0.97
12	15	1.7e-06	0.00023	22.2	5.8	1	23	463	485	463	485	0.98
13	15	1.2e-06	0.00017	22.6	1.3	1	23	491	513	491	513	0.98
14	15	5.4e-06	0.00074	20.6	0.9	1	23	519	541	519	541	0.99
15	15	2.7e-05	0.0037	18.4	1.0	3	23	549	570	548	570	0.94

Sequence Information

Coding Sequence: ATGACAAATTATGTGGATAAACTGGCTAACAGAATTGTGAGTATTTTTTTCAAGGAGGGAACTGGAAAATCTGATTCTGGCTTCATGGAGGATATTTGTTCTGCCATTTTTGAAAAAGCATTATTATCTATGGAGAATCATGAAGTGGACTTCTCTGATGAAATGGTCAAACTGGACCTGGAAGGAGAGACGAGTACTCATCAAAACTGGGTAACTCAAATCGCAAACACAAATCTTTGCGACAAGGAAGACGGATCCTTTCAGCGATGTCTAATAAACGTAGGTTTTGGCTCTATAATCCAAGAAGACATCCTCGAAAAGTTGCAATTCGTGCCAACAAGTCCTCAGCGGCAAAAATTTTGTAAAGTCCAATGCTCTATTTGCAAAAAATGGTTCCTGAACAACGACTCTATGGTAACTCACCTAAAACTCCACTGCAGTGGAAATCGTTGCGAAGTCTGCGAAGAAAATTTCCTCGACACTGCAACTCTCTACACTCACATGTTAACCCACATGGGGATGAATTTGTTCGAGTGCAACATTTGCCAAAAGAAATTCCCCTACAAATTAAGTCTTCGGAACCACATGCAAGCTCACTCTCTCGAAAAAGAATTCGAAAACGAGCTTGCAAAAAAATTCGACACGGAAATTCAGGGGGAAATCTACAACGAGGAATTAAATTCTACCCCCATTCAAAATTCTATCGAAGAAAAGTCTTTTTCTTGCGATATTTGCGAGGTTTCCTTCAGAGAAAAGGGAAATTTAAATCGCCATATGCTGACCCACTCCGAAGAAAAAACCTATAAATGCGACCTTTGTTTCGCTTCTTTTAGACAAAAAGGCAAGTTAAATATCCACATGACTTCTCACACAGGGAACAAACAATTCAAATGCTCGATGTGCCATAGATCTTTTGCCCAGAAGAATGCTTTGAATAATCACATGCTAGCTCATAGTGAAGAAAAACCTCATGCTTGTAATATCTGCGACAAGACTTACAAAAGAAAATCCGAATTGATAAGACATTCAATGGTTCATACTGGAGAGAGACCTTATGAATGTAAAGAATGTCTGATGACCTTTAGAGAAAAGGCAAAACTGAATTCTCATATGTTGGTTCATACTGGTGAAAAACCTCACGAGTGTCATATTTGTCACAAGGCTTGTGCAAGAAAATCTGATTTAAATAGTCATATGCTTTCTCACACTGGGGGACAGTACGATTGTACAATTTGCGAAAAGATTTTTACTAGGAAGTCGGATTTAAACAGACATACTTTGATTCATACGGGGGAGAAACCATTTGCTTGTGAACATTGCGATATGGCTTTTAGAGAAAAAACAAGACTGAATTCCCATATGCTTGTTCACACTGGTGACAAAAGACACACTTGTCATATTTGCCAAAAGTCGTTCAAGGAGAAGGCAATGCTGAAAAAGCACATGTTAACTCACATGGGCGATCGACCTTATGAATGCTACGTGTGCCAAAAAACTTTTACCCAGAAGACGACGTTGAATAGTCATATTTTAATACACGAGGGCGAGTCTTCCTATGAATGTAGCACTTGCAATAAGGCTTTTAGAGATAGAATTGTGTTGAAAAAACATTTATTGACACATGCTGGGGATAAATTTAATGACTGTCCGATTTGTTTGAAGAAATTCACGCACAGATCGGCTTTAAATAATCATATTGCGAATTCACATAGTTCCTGA
Protein Sequence: MTNYVDKLANRIVSIFFKEGTGKSDSGFMEDICSAIFEKALLSMENHEVDFSDEMVKLDLEGETSTHQNWVTQIANTNLCDKEDGSFQRCLINVGFGSIIQEDILEKLQFVPTSPQRQKFCKVQCSICKKWFLNNDSMVTHLKLHCSGNRCEVCEENFLDTATLYTHMLTHMGMNLFECNICQKKFPYKLSLRNHMQAHSLEKEFENELAKKFDTEIQGEIYNEELNSTPIQNSIEEKSFSCDICEVSFREKGNLNRHMLTHSEEKTYKCDLCFASFRQKGKLNIHMTSHTGNKQFKCSMCHRSFAQKNALNNHMLAHSEEKPHACNICDKTYKRKSELIRHSMVHTGERPYECKECLMTFREKAKLNSHMLVHTGEKPHECHICHKACARKSDLNSHMLSHTGGQYDCTICEKIFTRKSDLNRHTLIHTGEKPFACEHCDMAFREKTRLNSHMLVHTGDKRHTCHICQKSFKEKAMLKKHMLTHMGDRPYECYVCQKTFTQKTTLNSHILIHEGESSYECSTCNKAFRDRIVLKKHLLTHAGDKFNDCPICLKKFTHRSALNNHIANSHSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01389646;
90% Identity: iTF_01389646;
80% Identity: -