Basic Information

Gene Symbol
Snapc4
Assembly
GCA_904066005.1
Location
CAJFCP010000074.1:2835533-2838201[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.48 8.8e+02 0.9 0.0 3 16 175 188 174 190 0.92
2 6 0.47 8.7e+02 0.9 0.0 13 43 223 258 221 261 0.77
3 6 1.5e-05 0.028 15.3 0.3 3 44 269 312 267 314 0.93
4 6 3.7e-10 6.9e-07 30.1 0.3 2 43 321 366 320 369 0.95
5 6 3.5e-13 6.5e-10 39.7 0.0 1 44 375 419 375 421 0.93
6 6 2.7e-12 5e-09 36.9 0.1 4 44 428 468 425 470 0.95

Sequence Information

Coding Sequence
ATGAGTGATACAGAGGATCAGCTTATCCTCGAGGATATCCGAGCATTGGAAGATGCTTTATCCCGGACAAGTGCACCACGCCCTATACATGAAAATTCGCTCAAAAAAGAAATTATACCTTCCAACGATCGACCTTCGCAAGAAGTCAAAATCCATGCAATAAATCATTGTCCAACCTCCGAATCTGTTCCAGACAATAACGAAGAATGCAGCGAAACCCCCATTGAAGAGACTACCAATTCTCTCAATGCATTAGAACTTAATCGAAAGCTAATTGAACATCTGCTCGCTACTCGCAACGAAGTCGCTGCAATTCTCGATGAATGTAAAAGAAAAAGGGGAGATGTCAACGCAAGAATTAAACAGCGTTTAAGAGTGCAACCAACTAAAAGAGTTTTATCTTCACATGCTGGCATGCCTTACTTCAAGGATAAAAATTTTTTCATGGCTCCTGAAAATGAGGACACGAAATTAAAAAAAGCTAGATGCGAATTGCAAATAAACAACCTTCGACGTGTCACTCGCTGGACAGTAAAAGATAAAGAGACTCTTCTGAAAGCTATTTACCACGAAGTGCTCTCCAATTTGAAGAATATTGATGAAAAAGAAATGGATTCGGTTGAAAAAATGACTTTGAGGAAGACTCACTCTTTGCCAACTTTTGTTATAAATGCCATTGGACATCTAGGGGAGAGAGAATTTGATTGGATGAAGATTGCTGTGACAGACTTTCAAAATAAACATTCTCCAGAAGAATGTCGCGTTATGTGGAACGTTTTTTTGCATCCGGATATCAATAAGTTCAAGTGGAAAAATAAAGAGCTGTCTAATTTGCATAATCTTGCCAAAAACTATAAATATCAAAACTGGTCTATGATTGCCACGGATTTAGGTACTCAGAGAAGCGGCTACCAATGTTTTGTGAAATACAACACCACCAAAAAGTCTCAGGTCAATGAAAAACCGTGGGTTAAAAAGGAGGATAGAAAGCTCATGCACCTTGTGAACAAATTCAAAATCGGCGACTTCATCAACTGGGGAGACGTCGCAAGCTGTATGGAAAACCGTACCAAACAGCAAATTTACTTTCGTTGGATGTATAGTCTCGCCCCTCACATAAAAAAGGGCAGATTCACAGATGAGGAAGACAAGCTTCTAATAGACGCTGTTGATAAGTATGGTACTAATTTTAAAAAAATATCTACCCTCGTCCTACCAGCTAGGACTTCCGCCCAGCTCAGCGATCACTACAACACCATCGCCAACAAGGACCCAAACATCTGGACCCTCCAACAAGACACACATCTTGTCGAATTGTATAACGAACACGGAAACAACTGGGCCAAGATATCAACTTTATTTGAAGGCAAAAGCAGAGTTCAACTTCGTCATCGATATTCCTCCATCCTTCGATATCAAAAAAGAGGAATTCCACTCAATGAAATTCCTCGGAATTATTTTCAAAACAAATTAATAAAGCAATCTCTCATATTTCATAAAGTGCCGAGAAACATTAATCAAAATCAACCTCAGAAAATTAACGAGGTAGACAAGGAAATAATCGAGTATTTTTACAAACTCAATGCTGTTCCTTCCAAAGTCGGTCGTAGGCAAAAGTTTTATCATCCAAATGAACTTGAACTTATCACCAAGAAAATGTACAACATTCTTGAACTGTTACATGCAAAACTGAATATTCCCTACGATTTAGACGAATACGATTGTCTGTCTGAGAAAGACAAGCAGCTTTTACATTCGCTGAAACATCTTCCTCAAAATGCAGTGGATGGATCATTTTCCAGACATGTGGAGCAAATGCGAGTTACTATGTTTGGTCCTGATCAACAAGAAGAGAATCATTTTGTACCGCCTTTGCCTTTTGGGACTCTTTCGAAAGGGGATAAAATTCATCAAATGATAGACTACAGTATCTTCATCGACCAGAAGTTTTTTCAAGAACGAGAAATGATCATCAAAACACCTTACAATATCATCGAACCAATCGGTGAAGATATGAATTATGAATTTGACAAACTTGGCGAGCTGCTTACCAGAAAAAATTATAAATTCGAGAATCAACTTATAAATAGTATTTATGTATTGACGCCTGATGAATTGGGAAGGAGGGAAATGGCAAATCGAAACAAGGCTCTACGGAGTTATTATTTACCAAGTACCTCGAGTGTTTCAAATTCAGATGTCATTGTCCTAGGCAATTATAAAAATTACCCTATCAGTAATGATTACGAAATAAATCAATTCCCTTCGATGAAACCAAATTTTTGGACGTTACGTGGCTATCAAAAAATTCTCGATGCCATCAAAGAAATAAATCCGGATGATAATGTGATCGATTGTCTGGTACCTAAGACGAAAATGAACGACAGTGGAAAACATGCTTTAGAAATGCTGAGAATGCGGTTGATTCAATTATTTAAGTACCCTATTATTATGTCACAAGTCATACCGCCGGAGTTTTTCCAAGAAGCACAAGAAACTTTCAACCAGGGAGCTAAAAGGAAAAGTGAATCTACAAACGCTAGTAAATCTGGGAAAAGACAAAAAATTCAAGAGGATGATACATAA
Protein Sequence
MSDTEDQLILEDIRALEDALSRTSAPRPIHENSLKKEIIPSNDRPSQEVKIHAINHCPTSESVPDNNEECSETPIEETTNSLNALELNRKLIEHLLATRNEVAAILDECKRKRGDVNARIKQRLRVQPTKRVLSSHAGMPYFKDKNFFMAPENEDTKLKKARCELQINNLRRVTRWTVKDKETLLKAIYHEVLSNLKNIDEKEMDSVEKMTLRKTHSLPTFVINAIGHLGEREFDWMKIAVTDFQNKHSPEECRVMWNVFLHPDINKFKWKNKELSNLHNLAKNYKYQNWSMIATDLGTQRSGYQCFVKYNTTKKSQVNEKPWVKKEDRKLMHLVNKFKIGDFINWGDVASCMENRTKQQIYFRWMYSLAPHIKKGRFTDEEDKLLIDAVDKYGTNFKKISTLVLPARTSAQLSDHYNTIANKDPNIWTLQQDTHLVELYNEHGNNWAKISTLFEGKSRVQLRHRYSSILRYQKRGIPLNEIPRNYFQNKLIKQSLIFHKVPRNINQNQPQKINEVDKEIIEYFYKLNAVPSKVGRRQKFYHPNELELITKKMYNILELLHAKLNIPYDLDEYDCLSEKDKQLLHSLKHLPQNAVDGSFSRHVEQMRVTMFGPDQQEENHFVPPLPFGTLSKGDKIHQMIDYSIFIDQKFFQEREMIIKTPYNIIEPIGEDMNYEFDKLGELLTRKNYKFENQLINSIYVLTPDELGRREMANRNKALRSYYLPSTSSVSNSDVIVLGNYKNYPISNDYEINQFPSMKPNFWTLRGYQKILDAIKEINPDDNVIDCLVPKTKMNDSGKHALEMLRMRLIQLFKYPIIMSQVIPPEFFQEAQETFNQGAKRKSESTNASKSGKRQKIQEDDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01392694;
90% Identity
iTF_01391893;
80% Identity
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