Sgif017598.1
Basic Information
- Insect
- Synergus gifuensis
- Gene Symbol
- grn
- Assembly
- GCA_904066015.1
- Location
- CAJFCO010000145.1:507715-509788[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-18 3.4e-14 52.9 6.3 1 35 87 120 87 121 0.96 2 2 2.2 7.7e+03 -2.6 0.0 7 14 189 196 187 199 0.79
Sequence Information
- Coding Sequence
- ATGTCTTGCGTCAAAAAGGTTTTGGTTCGGTTCGAAAATACTGTGTCATCTCAGAGGTTAAGTGGCCCAGGAGGAGGAGGAGAAAAGAGGCTGGACGAGGATACCTATTATACACTTAAGTGTTTGCCACTCGGGATCACTGGCACAGGTGTTAAAACCGTACTCGGTACACTAAAAGGTTCTAGACTCCTAGTGGAAGGATTAAGGACCACTTCTGACCGAGAAAAACGCAGTGCTGCAAGAAGGGCGGGTACGAGTTGTGCAAACTGCAAAACGGCCACAACGACACTCTGGCGAAGAAATCAAGCCGGCGAGCCTGTTTGCAACGCATGTGGTCTCTACTACAAACTTCATAACGGCAAGCGTGTTTGGCGGATCACGGTTCTCTGTTGTGTTGTATTTGGGCCCTTACGTGTGCGTCAACCACTCAAGGGTGGAGCGTGCTCAACTGCGTGTGACACAGGAAGTGCCGGAAGTGAGCTCTGCCGGCACGGAGAAGCCCTCCACCAAAGGTTTTTGCTCCCATTATTTTCCCTCGGAATCTTTCACGGGACCAACCAGGAAGACAATTCTCATATGTGGAGAGGGGCAATCCGCAAAGGATTTAGTTCTAGCCCATCTTCCAGTTTCCCAGACTTCCGGGTCCAGGAAGTCCTCCACGAAGAGTGCTTCCGAGAAACATTTACGAAAATAAAGTTTTTTGCAAGTTTAAATTCGCCACGTACAAGCTTTTCGTCTGATTTAGTTCTTCCAGACCTCGTTCCAGACTCTAGTCAGTTTTCCTGGTCAGAGCCACATTCGAAGTTACGAAAATTCTCCAGAAAACTACTAGACCCACATGGAGATTTCTGCACGGGAAGTAGTGCATGTAATCGATTTGCGGAAGTATTAAAGTATCATTGGGAACAATTTCTTTTATTATTTTTGAAGAAAAGACATACGAATTAG
- Protein Sequence
- MSCVKKVLVRFENTVSSQRLSGPGGGGEKRLDEDTYYTLKCLPLGITGTGVKTVLGTLKGSRLLVEGLRTTSDREKRSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNGKRVWRITVLCCVVFGPLRVRQPLKGGACSTACDTGSAGSELCRHGEALHQRFLLPLFSLGIFHGTNQEDNSHMWRGAIRKGFSSSPSSSFPDFRVQEVLHEECFRETFTKIKFFASLNSPRTSFSSDLVLPDLVPDSSQFSWSEPHSKLRKFSRKLLDPHGDFCTGSSACNRFAEVLKYHWEQFLLLFLKKRHTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -