Basic Information

Gene Symbol
-
Assembly
GCA_904066015.1
Location
CAJFCO010000154.1:119162-126643[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 3.5 4.9e+02 2.3 4.3 2 23 856 878 855 878 0.89
2 15 0.031 4.3 8.8 1.2 2 21 886 905 885 908 0.93
3 15 0.0028 0.38 12.1 0.1 2 23 968 989 967 989 0.96
4 15 0.13 18 6.8 0.8 3 21 1155 1173 1154 1174 0.96
5 15 0.57 79 4.8 0.3 3 23 1191 1211 1189 1211 0.96
6 15 0.043 5.9 8.3 1.1 1 23 1287 1310 1287 1310 0.95
7 15 0.031 4.4 8.8 1.4 2 22 1342 1362 1341 1365 0.89
8 15 1.2 1.7e+02 3.7 0.1 1 23 1385 1407 1385 1407 0.95
9 15 0.24 33 6.0 1.4 1 21 1454 1474 1454 1475 0.93
10 15 0.0023 0.32 12.3 1.7 3 23 1936 1956 1934 1956 0.95
11 15 0.61 84 4.7 0.3 2 23 2179 2200 2178 2200 0.96
12 15 0.64 89 4.6 0.5 1 23 2268 2290 2268 2290 0.96
13 15 0.18 25 6.4 2.1 1 23 2366 2390 2366 2390 0.94
14 15 0.024 3.4 9.1 0.2 1 23 2409 2434 2409 2434 0.94
15 15 0.017 2.3 9.6 2.8 1 23 2436 2458 2436 2458 0.97

Sequence Information

Coding Sequence
ATGGCCGACCCTGTAAAATCTTCCTTTGACCCTGAACCTTCTTGTTCTAATACCATCATACTTGGGATTAATGAGCAAAAAGTAAATACCATTAAAACGCGAGATTATCGCCCAGCCCCAGCATCTAGGAAACGAAAAAGAGAAGAAAAGAACTACCAAAGGAACAATATAGAATTATTCAAAATGTGCAAACCCTTCTCCATTAAATTAGAGCGTTTACCCCAGCTAGCGATATCCAAAAGTTTAACAAAATGTGACCAGGTGGTTCGCACTAAGAGAAGACACAGGTGGAGCAAAGGGTTTGCAGATAAAGTAAGAAAGAGATCAAAATCTGAGAAGCCTACTGAGAAATCCACTGAGATGTCAACTGAGAAGTCAATTGAGAAATCTAAAAAATCTGAGACACTCGAGAAATGTTCAGAGGCTAATAACATTTCTAATTCATCTATGGAACCAGAACATCCTTGGGGCTGTTGTCGAATGATACCTTTCAAAATACATCAATCAAGGAATCACAGAAAATCCTCCTTGAGCAAAAACAGAAACTCGATTGAACCCAGTCGCTCACAAACCGAAGTTCCAAACACCAATATTACGGAACATACCGTGTCAACAATGTTCTTAAGAGACAAGAAACTATCTCAAGAGGACAAACGTTCTAGCTCAAAGTCAAAAGAGAACGAAACTCCGACTGATATTGTAAAAAAGCACGACTCACATTCCCTACTTTTATTGCCAGTTGAAGAAAAGAGAACTTCCTCTGCCAAGGAAGAATCTACGTCTAAAACTGTAGAAGACGAATTGGTCTGCAGAAGAATATTACCTTACACACGAAAAACAAAGTGCAAACCATTGCTTAACTCGCCAAATAATGCCATTCCACAAGCTTTGAGTAGTAAACATTCAGCTCAGTCAAAATCCGTCCAAAATCACAATCTCAAAGAACTAAAACAAAAAGCTTTTGAAAGTTGTTTGAAAAGGGAAACAAGGATTTCTGAAACCGAGAAATATTCAGGTTGCAGCAAAACAGAACCTTTACCGTTAAAGACCGGTTTTAGAGAGAAAGAACAAAGTCTCCATAAACTGAGTAATAATGACACGACTGTTGAGATTCGTAAAAGACCCTCGAAACTCGAATTCAAAGTTTGTGAAAAGACTGATGAAACCAAAGTACCAGAACCAAAGGTCTCGAGGGATTACGATAATGACGAGAATGTGGAAGACAACAATTTCACGTGGAATAGTTCTAATATGTGGAAATATAAAAGAAAACACAGAATCAGACGCATCAGCAGCAGTTCAAGTGAAGAGGAGATTCTCAGGAAAAAGCCTAAATTATCGCCCACAGTTGATTACAGAAGTTCGAGTGAAATGAAACCAGGTCCGAGTTCTACAAAAGGTAAAAGAAGATCATATTCGGGTATGCAAACGTTGTGTCCTTCTTCATGTATGCATACGGAACATCAAGGTCACATTAATTTCTTATACAACAAACCAAAGGTCAGACCTCTTAAAGAAAGTCGAGTTCTTCTTCAAAGATTGGAAGATATAAAGAATGATCTTGAAGTTATAAGATGGAGGAATAGGTTGATTAAGTTAGAAATAGAAGAAGTGGAGGATGAAGAAAGAGAAGAAGAAAAAGTTGAAAGAAACTTAGAAGATGATGAGAAAGATTCAAGATACCATATGTATGATGATAGGACCGTATCGAATGAAGCTTTAAGAGAACCAATATATCAAAAAATGCGAGAAATGACTGATTTTGACACAATGGGCGCACCTTATCAAGATTATGATAAGAGCAATCTTTCTGAAGGTCAAATGTTGAGTAATTCCACGCTAGATATGACGAGGTATTGCAATAACACAGTGGATGAACCTCAATATTTGAAGGATGACATATGTCAAGTTAACCTGTCAAAAGATGATGAAGCTTTAGATGATCTTCTGAGAGATGATGATGACATCCCTCTTGAATTTAGCGAGTACCCAAAAGTACTCTTGATACGGTTAGAAAATCTAGTTGGGTCTTTTGAAACCGAGTATTCTGCTTTCGAAATTGAAAACTTAGAACAGAAGTTCATAGATTTTATGATGAACTCTAATTTTACTTATGACAAGCAGTCACAGTCATTTTTCGCAGTTTACAAACGGCTTCACGCTAAGAGAGCAAAGGATAGGGAGTTGGAGATGATAAATCGAGAATCCCCATTTTATGTCAATGACGATGCTTCAGAGGTACATGAATTGGAGGAGACGGATTCTCAAGACGATTATGTTGATGAAAAGCCTTTGGTAATTGCCTTGGATACTGAAAGAGAAGTTTCTAGGAATGTTGAATGGGTCTCCGACGTAAGTAGTAACAATAGTGCTTCCGAGAATATTCTTCCTTCTTCAGTTAATCACGATTCCGAATTGGCAACAATTACACCTCTGCCGAATGATGCGAATCAATCAATTGAGTCTCCTATCTGTGGTAATAATGAAATAAGGCCCATTGAGTTTGTTACCTGCGAAAATGTTTCTAAAGAAGCAGAATCGCCGAAAGAAGATCCTTTGTACATTACATGCAAATTTTGTAAAGTAAGTTTTATAAATCTGCATACGTTTTCTTTGCACAAAGCAGAATGCCACGTGAAAAATAAACAGTCCTTGATGTGTGAATATTGCGGTAATCAGTATAAATCTAGCCGAGCTTTGAAGTTACATATTCAATGTGTTCATGATCAAGATAATTCTGTCCTTCAAAAACAGAAAACAAGCAGTAAGGCTAGTGAGAAAACAAGCAGTAAGGCTAATGACAAAGCAAGCAATAAGACTAATGAGAAAAGTAAAGCTAATGAGAATAAAAGTGCTAGTGGTCATCAAAAGAAAAAGTTAATACCGGCGGCTCAGCATTTATCTTGTGGCGTTTGTTCGGTCACTTTTGAATCCAAAGAAACTCTTTGGGATCATATTCTCAAGCACACAGAACGAGAATTGCAGGATGCCTACAATGATGCAAAGAAAAACAAGGATCTAGGATTAGAGAATAAAGTTGAAAATTCGAAAAAGAAAAAAAGCAAGAAGAGTAAAAGCACGTCAAAGGAAAATGGTGAACCGAAGAAGGATCAAAAACAATTGCCGACTAAGTATACTCAATGGAAAGATCGGATTCTTTATAAAATCAGTACTAATGACGAAGCGGATAAGAATGTTTCTATAAGTCAAGATCCTAATGAAAACCAGGCTGAAGAAATCATTTTGAGTTCTTCAGGGAGTGAAATATGCATAGAAAGCAATAAGGATTGTGAAATTTTGGATATCAATTCATCTGCATCACGAAGCTCTGTCATCAAGAATACAAAGTCGGCTCAAGAAAGTGACGTAAATTCTTCGAAAGTTGTTACAATGTGTCCTTGTCATAGAAATGATACGTCTACGATGGTCAATGGAGACATGCAAATAGAAATGGTCCTTCTTTGTAATATTTGTCAAGTTCTTTTTAGACGACGAGATTGCTTTGAAGTGCACTATAGGGTCAATAAGTCATGCAATATGGACAGAACGAGTAGAACTCCAAAATTATTTTGCAGCTATTGTCAGATTATTTTGAATTCATTGCCGGAGATGCGCGATCATTTGAAGAAACACGCACAAATTAATCTTCAGGGTCATATCACCTTCTTATGCAACATCTGCAAAGTCATGTTCTTTGGTGTTGGGTCCCTTTTCTACAGTCACTGGTTTAATCACAACAAGGACGTAAGTTTCCTAGCCAGTCGGTATTCATTCCCAAAGTTGTCTATAGTACAGATTGTGAACACACCCAGCAGTACAATACAGAATCAGGAAGAGGAGTATCTTTTCGTTGCAGAGTTCGTTTGCAAGGAGTGCAAAATACCTTGCGGATCAGAGGTTGATTTGCAAAAGCATGCTTGTATCATGCATCGAGCTTCAGCTCAAGTTCCCGTTCTAGCTCCAGTTCCACCGAGCAAGACACAAGAGACAGCACAGTCAACCCAAAATGTTACTGTAAGAGTAACCTGCTTGGAGTGCAGTAAAGTATTCTGTAGCAAAAAAGAATATGACATACACGAGAGAATTTACAATCATTTGAATTCTATTAAGCCACAATATATTTGTGTGTCTTCAGATTACAATGAAAAGGCTTATATTTGTACTCAATGTAAAACTGTACGTATGTCTATAGAAGACTTAAAAGAACATTGGATTCTTCATCGTGCGTTGAGAGAAAAGTTTGTATGTGCCAACTGTCCTGAATTGCGCTCCAGTTCATTTGAAGAAATTGAGACCCATTGCAAAAGTTGCTTTAAAAACTTAGTTGCCGTGTGCGTAGTTGTTTTGGTTTTAGCTTCTCATGAATGTAAATCCTGCAATCTTCATTTTGAAACCAGTAATGAATGGAAAGAACATCGTCTAATGTGTTTGCCTTCACCATTGTCGCAAACAACTTGCATTAGAATCACTGACTTGGGAAATGACCCCTCAAATCCTCCAGTTTTACCTTCGGTTATAGATTCAGTTGAATCTTCAGTTTCATCTGCAGCTCCTCCTCCTGCTCCATCTGCAGTTGTATCTTCAGTTCCACCTACTTTGTCATCTTCAGATACAACTTCTTCACCATCTCTAATTCCCCTTACAAAAGCCACTTCAACTGCAGTTTCAGTTACACCTTCATTATCGCCAACAAATAACACTAACCCTGTTTTATCGAAACCTGCATCTAGTAAACCTAAATTTACTTCTGTTAATTTGTTAAAGAAGTACTTATCGTTGAGTTCAACTCCCGCGACAAAATCCAAAAAGAAACATCAAGTCAGTCAAGACGTGGAGATAATTGATATTCTTTCCGAAAGCAGTTCAAGAAGCTCCGTAGCTGAAGATCATAGAAAGAAAAATCCTGTGTTGAATACATATGATGAACCATCGACTTTAGAAATTGATCCATTTGAATCCTACATTCCTGGTAATCTAAAGAATAAACATAGACAAAAAGATGCTTCACTTTCTAAATCTGTTGTCTGTTATCCACCAAAAAGAAAGAATATTAAAATTAAGTCAAAACCGACACCGACAAAAGTTCCCACGAACACAACTAATACGCAAGAGAACACTATCAGTGTAGATTCAGAGAAGACGAGTTTAGCCATGACTGTCGTGAATCCAGAGTTTGAATTCCTGCTTTCAGAATTGGAAAATTTAGAAAAAAGTACCGAACCTTTAAAGAAGTCCAATACTCTCCGAAATATTCGAAAAAAATCTACAAGTACAGAATTTAATCACGAGACTTCTCTTTTAAATACTCGAAGTGCAGAAAATTCTCCGAATATTTTTGAAGATGCTAGTTCATCAGTCGTATCCGAAACATCCTCATCTTCAAAGAAGGCAGAGAAAGAAACTCCTCTTCCCTTTGAAGTCGTCCTTTTACAGGATGAAGACGCCGATAGTCTAAAATCAGGAGCTGTTTCTCAAATTTCAACTGCTCAAGTGGATATTAATTCTAATAAATCAACGAATCCAGAAAATGCACAAATTGATGTTCCTGATCAGTTCACTAATAACAACAGTACTTCCAGTGATAAAGATACTCCATCCGAAACAAATACCGCAAGCATAATTGAGGAGTACATCGAATACATCATGATGGATGAAGCTGCAGGTGCCAAGTCTCCAGCTAAAGTGAAGGATCCTGTTCCTGATAATCCAGAACCCGTTGAAGTTACCTCGAAGGTTGAGAAAGTAGCTCCCTTGCGTCTGCGTGTCAGGAGCTTGGCGGAACTACAGGAGATAAAAATGCATCTCTGTGATTATTGCGGACAGAGTTTCGATTCAAGGGAGAAGTTCGAGGAACATACCCAATTACATTGCGGAGAGGCTCTACCCGCAGATTTTCTACAACACCCACCACCACCTTATAGAGAACCTATTCAAAATTCAAGGCCCCAAACCGGGAATTCAAACGAAATTGATTACCGGGAAGCTTTGACACAAAATTTAGTGAGGAGAGGTGTCATTCCTGCAAATAAGGACTTTGTTCCTTCTCTATTACCCTTTACTATTCAAGAGCTAAACTCATCGACGTCTAAGGCAAATATGACACCTGTTTCACCAAACATCGTCATTCCAGACACAAAAAGAAAGCAGCCTCAGGCAACCTCTTTGTTGAAGAATCAACAAACTTACAGTAATAATACTGGTGTGATTATACCTTCCAGTACTTCACGTTTCAACACTTCAGGTTCTAATAGCGCTCCTCGTTCAGGTACGATTCAATTACCAGAACGAACTGGTGTAAGTGTCTTGCAGAAACGACCCTCAGGTGCTGCAACGAGGATTCAAAATCTCTCCCATTCTCAAAGATCTATGACTCCTAGTGTGATACAACATCATGGCCTCCCACAAGTTTACGCGAGCAGGCAATCTGGGAAAATTAGTAATTCACTTGGATCTTTGACTAGACCACCACGGAATTATACCTCTGGTGGATCAATGTCTATTCAACCTGGACTAGAGAATCCCAGTAGCTCGTTGACCTGTGAGACTTGTAACTTCACTGCTAAAAGTTTGCCTGAGTTCTCTTCCCATTTGATAATGCACTACGTGGAGAATTCAACAGAGCAAAAGAACCATAATGTCAATCATAATCATCTTCAAAATCACAATCAGTTGATTGAAGAAACTTTGAGGAACAGTCCGAACACCTCAAGATGTCAGACTTTATCTTTATCTGTGGGCGATGTGATTAACGAAAAATCTGCTTCGGCCAGTGGAAACTGGCAAACTCCACCGCGATATGTCTACGCTTGTCAATTGTGTGATTTTCGAACAGAGTCCAAAGCTTCAATTCGTCTTCATGAGAAAAATCATTCGACGGTAGCAGTTATGCGGCAGAAGAATTTAGAACGTTTGCAAAATCATCAGATGATTCAACAAACTTTCCAAACACAGCAGCAGCAACAACAACAGAGTCAGATGCACTTTGTTCCAACCTTTTCCCAGCTGATTGAGACGTGCAAACCAAGTCAACCAGCTACGTTGACTAATCATGACAAAAATGGGGTCAGTCTTTACAGTAGGGTAAGCGGTGATATTTTCCAGTGTCAATTGTGTAACCAATTTCTATTTAAGTCACAAGAAGAGTTTAATAGACATTTGAATAGTTCTCATAAAGAAACTCGCAAAGAGGTTGTCATAGAAACTGCTGATTCAAGTACGGTATGCTTTGTTTGCGATTATTGTGAAACACCACAGATTTTTGAGTCGGAAGTTAACTTGAGAAAACATATGAACTTTTTGCATAATCACGTATGTCAAATTTGCTCGCTACGGTGCACGTCTAGGGAACTATTACAGAGTCATGTGTTGAGTCATAAGTTGGAGAATCAGACTTAA
Protein Sequence
MADPVKSSFDPEPSCSNTIILGINEQKVNTIKTRDYRPAPASRKRKREEKNYQRNNIELFKMCKPFSIKLERLPQLAISKSLTKCDQVVRTKRRHRWSKGFADKVRKRSKSEKPTEKSTEMSTEKSIEKSKKSETLEKCSEANNISNSSMEPEHPWGCCRMIPFKIHQSRNHRKSSLSKNRNSIEPSRSQTEVPNTNITEHTVSTMFLRDKKLSQEDKRSSSKSKENETPTDIVKKHDSHSLLLLPVEEKRTSSAKEESTSKTVEDELVCRRILPYTRKTKCKPLLNSPNNAIPQALSSKHSAQSKSVQNHNLKELKQKAFESCLKRETRISETEKYSGCSKTEPLPLKTGFREKEQSLHKLSNNDTTVEIRKRPSKLEFKVCEKTDETKVPEPKVSRDYDNDENVEDNNFTWNSSNMWKYKRKHRIRRISSSSSEEEILRKKPKLSPTVDYRSSSEMKPGPSSTKGKRRSYSGMQTLCPSSCMHTEHQGHINFLYNKPKVRPLKESRVLLQRLEDIKNDLEVIRWRNRLIKLEIEEVEDEEREEEKVERNLEDDEKDSRYHMYDDRTVSNEALREPIYQKMREMTDFDTMGAPYQDYDKSNLSEGQMLSNSTLDMTRYCNNTVDEPQYLKDDICQVNLSKDDEALDDLLRDDDDIPLEFSEYPKVLLIRLENLVGSFETEYSAFEIENLEQKFIDFMMNSNFTYDKQSQSFFAVYKRLHAKRAKDRELEMINRESPFYVNDDASEVHELEETDSQDDYVDEKPLVIALDTEREVSRNVEWVSDVSSNNSASENILPSSVNHDSELATITPLPNDANQSIESPICGNNEIRPIEFVTCENVSKEAESPKEDPLYITCKFCKVSFINLHTFSLHKAECHVKNKQSLMCEYCGNQYKSSRALKLHIQCVHDQDNSVLQKQKTSSKASEKTSSKANDKASNKTNEKSKANENKSASGHQKKKLIPAAQHLSCGVCSVTFESKETLWDHILKHTERELQDAYNDAKKNKDLGLENKVENSKKKKSKKSKSTSKENGEPKKDQKQLPTKYTQWKDRILYKISTNDEADKNVSISQDPNENQAEEIILSSSGSEICIESNKDCEILDINSSASRSSVIKNTKSAQESDVNSSKVVTMCPCHRNDTSTMVNGDMQIEMVLLCNICQVLFRRRDCFEVHYRVNKSCNMDRTSRTPKLFCSYCQIILNSLPEMRDHLKKHAQINLQGHITFLCNICKVMFFGVGSLFYSHWFNHNKDVSFLASRYSFPKLSIVQIVNTPSSTIQNQEEEYLFVAEFVCKECKIPCGSEVDLQKHACIMHRASAQVPVLAPVPPSKTQETAQSTQNVTVRVTCLECSKVFCSKKEYDIHERIYNHLNSIKPQYICVSSDYNEKAYICTQCKTVRMSIEDLKEHWILHRALREKFVCANCPELRSSSFEEIETHCKSCFKNLVAVCVVVLVLASHECKSCNLHFETSNEWKEHRLMCLPSPLSQTTCIRITDLGNDPSNPPVLPSVIDSVESSVSSAAPPPAPSAVVSSVPPTLSSSDTTSSPSLIPLTKATSTAVSVTPSLSPTNNTNPVLSKPASSKPKFTSVNLLKKYLSLSSTPATKSKKKHQVSQDVEIIDILSESSSRSSVAEDHRKKNPVLNTYDEPSTLEIDPFESYIPGNLKNKHRQKDASLSKSVVCYPPKRKNIKIKSKPTPTKVPTNTTNTQENTISVDSEKTSLAMTVVNPEFEFLLSELENLEKSTEPLKKSNTLRNIRKKSTSTEFNHETSLLNTRSAENSPNIFEDASSSVVSETSSSSKKAEKETPLPFEVVLLQDEDADSLKSGAVSQISTAQVDINSNKSTNPENAQIDVPDQFTNNNSTSSDKDTPSETNTASIIEEYIEYIMMDEAAGAKSPAKVKDPVPDNPEPVEVTSKVEKVAPLRLRVRSLAELQEIKMHLCDYCGQSFDSREKFEEHTQLHCGEALPADFLQHPPPPYREPIQNSRPQTGNSNEIDYREALTQNLVRRGVIPANKDFVPSLLPFTIQELNSSTSKANMTPVSPNIVIPDTKRKQPQATSLLKNQQTYSNNTGVIIPSSTSRFNTSGSNSAPRSGTIQLPERTGVSVLQKRPSGAATRIQNLSHSQRSMTPSVIQHHGLPQVYASRQSGKISNSLGSLTRPPRNYTSGGSMSIQPGLENPSSSLTCETCNFTAKSLPEFSSHLIMHYVENSTEQKNHNVNHNHLQNHNQLIEETLRNSPNTSRCQTLSLSVGDVINEKSASASGNWQTPPRYVYACQLCDFRTESKASIRLHEKNHSTVAVMRQKNLERLQNHQMIQQTFQTQQQQQQQSQMHFVPTFSQLIETCKPSQPATLTNHDKNGVSLYSRVSGDIFQCQLCNQFLFKSQEEFNRHLNSSHKETRKEVVIETADSSTVCFVCDYCETPQIFESEVNLRKHMNFLHNHVCQICSLRCTSRELLQSHVLSHKLENQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01391602;
90% Identity
iTF_01394727;
80% Identity
-