Basic Information

Insect: Synergus gifuensis
Gene Symbol: -
Assembly: GCA_904066015.1
Location: CAJFCO010000081.1:771768-775349[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.51 71 4.9 0.4 1 20 105 124 105 128 0.93

2 13 0.01 1.4 10.3 4.6 2 23 269 291 269 291 0.91

3 13 0.0003 0.041 15.1 1.8 2 23 377 399 376 399 0.95

4 13 6 8.3e+02 1.6 7.8 3 23 488 509 487 509 0.96

5 13 0.089 12 7.3 0.8 1 23 558 581 558 581 0.95

6 13 0.00019 0.026 15.8 0.6 3 23 631 651 630 651 0.97

7 13 0.00048 0.067 14.5 0.2 2 23 673 695 672 695 0.93

8 13 0.0076 1.1 10.7 3.6 2 23 735 757 734 757 0.96

9 13 0.1 14 7.1 4.2 3 23 772 793 770 793 0.92

10 13 0.00015 0.021 16.1 0.1 2 23 837 859 837 859 0.93

11 13 0.067 9.3 7.7 0.9 1 23 938 960 938 960 0.98

12 13 9.9e-05 0.014 16.6 4.2 2 23 975 997 974 997 0.96

13 13 0.0044 0.62 11.4 0.4 1 23 1068 1091 1068 1091 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.51	71	4.9	0.4	1	20	105	124	105	128	0.93
2	13	0.01	1.4	10.3	4.6	2	23	269	291	269	291	0.91
3	13	0.0003	0.041	15.1	1.8	2	23	377	399	376	399	0.95
4	13	6	8.3e+02	1.6	7.8	3	23	488	509	487	509	0.96
5	13	0.089	12	7.3	0.8	1	23	558	581	558	581	0.95
6	13	0.00019	0.026	15.8	0.6	3	23	631	651	630	651	0.97
7	13	0.00048	0.067	14.5	0.2	2	23	673	695	672	695	0.93
8	13	0.0076	1.1	10.7	3.6	2	23	735	757	734	757	0.96
9	13	0.1	14	7.1	4.2	3	23	772	793	770	793	0.92
10	13	0.00015	0.021	16.1	0.1	2	23	837	859	837	859	0.93
11	13	0.067	9.3	7.7	0.9	1	23	938	960	938	960	0.98
12	13	9.9e-05	0.014	16.6	4.2	2	23	975	997	974	997	0.96
13	13	0.0044	0.62	11.4	0.4	1	23	1068	1091	1068	1091	0.98

Sequence Information

Coding Sequence: ATGACATCTACAGTGGCTCAAGAAATTCGGCTACCGGAACCAACTGATTCCGAACTAGCGGACAGCGATGGGTCCAGCAATGAGGACCGAGATGCAAGAAAACGTCTTCTTGGAGAAGCGGACTCTTCAGGACCCAAAAAGAGACGAAAACAAGCGACTCCTGTGAGATTTCCAACTTCTCTCATGCTTGGTGATCATCCTGAATCTGAGGAAGAAGAGGAAGATGCAGATCCGGAAGGTAAGCCGAATTCGCCACGAGCGGAGGCACTTCAAGGCCATCCAACAACGAAAGATGAAAATTTAAATATAGAATTCCGGTGTCAGTACTGTAGTCAATTGTTCGATGGCAAAGCAACCCTCGACCTCCACCTCGAGTGTGAGCACAATTTTGTAAACGCGTCCCACATACCTTCAGATAGCCAATCACCTCAGCCGGGAAGTCAGAGTCAAACGACTGTAGAAACGATCAATCAGCAATCTGATCAATCTCTTCATTTACCTCATCTTCCCAATATCGAAATAAAAAATTTAGGCCCTTCCTGGTTCTCTGAGCATGTGCAATCTCAGAATCATAATCAAAATCAAACGCAGACTCAAACCCAACAACAGAGTGAGGAATGGTCGGCAAACTGTCACATGAGTCCGATCACATCCATACCAAATCATCTAACAGGATTGCCAAATTTTCCTGGAGGACTGCAACAGTATTTTCCTCTACCTCCAGGATTTACCCTTTCTGATTCTGGCCAGATCCATCGAACCACTTTGGGGCCAGCACCAGTGCGAATTTTTAATCCCGACGCTTACTGTGATCTCTGCAATAAGGAATTTTGTAACAAGTATTTTCTCAAAACGCACAAGGCTAACAAGCATGGTATTTATGTGGATCCTCCGAATCCAATGACAATGGGGGAGAACAATGTGGGGGTTGGACCACTTTATCCAATAGGACAAATGCCTGGAAACAATATTAAATTGGAACCCAATCAAAAGTTAGAAAGTGGTACTAGTGTTCAAGTACCACAATTGCAACAGATTTCACAATTAACACAATTGTCACAAAAACAACAGTTGCCACAAGTGTCACAATCACCTCAGATACCACAACCACCCCCACCTCCAACCGTTCCCTGTGATATTTGCCATAAAAGATTCCGAAGCGAGGAATCAGTTAGGAAGCACAAGCAAAAGGTGCACACTGCATCAGCATCAGAGGATCAGAAGAATCCTAATCATCAGGTCCAACAGTCATCTGTAACTGATGAGGAGAGGGAAGTGCATCATCAAAGTCCTGGAGCAATGGAGATGCTCTTCAAACAAGAATATGGAGTTGAACAAGAAGACAATGCATTCATGCCACCACCGAGACATCTTTCCCCTCAAGCTATTCAACAAGCCAAAGAATCCAACTTCAGTGCCGAACGACTTCGCAGACTGGGGGTTTTAAACCCAGACGCGTTTTGCGAAATTTGTTGTAAAGAGTATTGCAACAAATTCACCCTACGTACCCATAAGATGAAGAGACATGGGATAGTAATCCAGGACAACGAAAAGCCACCACTCAATCCGGGATCAGCTGCCACCTGGCATCAAGTGCAAACTACCCCCTTGAACTTGATCATCAACGAGGCAGGAAGTGGATCCGAGTACAGTGATAGATCAACTGACGATCACGAGTGCAAACCTTGTGGAATTCGTTTCCAAAACCTTGGACTATACGAGTCTCATCGTCAAAGAGTTCATGCTGACGAAATTTCTCCTAAGATCGAGTTTGATTCAGAATCTGTGGAACAACGAATTACAAACAACGATGCCATTTCTGAGGATCTGCAAAAACTCCAAACAATGATTTTACAACTGAATGGTCTCGAAACTAACAAGATCTCTGCATGTTCGGTTTGTGGGAAAGAGTGTGATTCCAAAGTTAGTTTAAGAATTCATATGATGGAGCACGGTATCACGACAGAAGAGCCAGCATCACCATCTCAAGAAAAATCCTCAACACCCATTTCTACATACTGTACCTTGTGTGAAAAAGAATATCCAAACCAAGAAGCTTTGAGGAAACATATCTCAGAAGATCACAAACAGTCATGCGATTCGACTTTTGTGCCGCATGTACCATCTATTTCTATGCCCTCAACTCCAACATCTGTTCAGGCATCCGAACGCAAAACTTCATCCTTAACTCCCACATCCAGTTACTGCGAGATTTGCAACAAGGAGCTGTGCAACAAGTACTTTATGAAAACCCACATGCAAAGGATGCATGGTATCGAAATTGAAAATGGGGCTCAGATTGGCGGAGTCATCTGCAATATCTGCAACAAGGAACTATGTAGCAAGTATTTCCTACGGGTCCACAAACACAATACCCATGGAATTATCGAAGAAGGATCAAATCTTGGAAATAAACAAGAAAACTTTGATCCACAAAGTACAGAGGATACAGCTTTAAAACCTGAAATCGGTGATTTGAACCACAGATACTTCACTCATTTTACAGAGGTTTGTCCTATCTGTAACAGAAGATTCAGAAGCATCAAATGGCTCAAAGCTCACTTATTGGGTGACCATGGAAAAATGGGGATTGACAAATGGAGGGAATTGGAACAACAGTACCAAGCAAATCAGAAGACCAACAACAGACTAGCAGGAACTTCAAGACCCAGTCAACTAAATACGCCTCTGAAGATACCTAATGGTTTCGAATCCTCTCAAACCAAGGTTCCCGATTTGACTGCAACCCTAGGGAACCAAGTACTCTCAAACTTATTCGGGTCATCAGTCGAAGATCAACAATCTAAAAGTTACAGATGCTCCTACTGCAATTTTGCCACAACTGTCTTACCTTTCCTCTTCCTCCATGAAAGATCTCACATCAATCCCCAAGAACCTGCAACCGAAAATGACAAATTCTTACAGTGTCCTCTCTGTCCTCAAAGTTTTTCCCAACCAGAACACTTTCACCATCATCTTCTAACTCGTCACCAGTTCCCTAATATACTGTCCCAATTTCCAGCTCCTATTTTTAATAACCTCAGGTTAGAAGCCTTTGGAGAAAAGAATAGCGATACCAAAGAGATAGAAATGGAACCCGAGGAGCAGAAGAATCCGAGTCCTCAAGCCCAGAACAATTTAAATGAACCCAGTATTCAAAAGCAAAATGATACAGCTGTACAGGTGACACCTCAAGGGGTCTATAAATGTGCACAGTGTGGATACGCGACAGCAAATTTGAATCGCATCAAAAAACACATCAGAAAAGATCACAAGGCATGTGGAGAACCGACGGAAAGTGTTATTGCAGAGTTGAGCAAAATTCTCAAGGAGGTTGCCAATAAGCATAAAGTTCCTGCAAGTTATGCGATGCCCCAGGACTTGAATTTGAATCCGGAGAAGACGATAATGCAACCTTTTTTGATTGAAGAGCAGCAGTTCTCCCCAAGTCGGGATTGCGGCACAACTGGAGGGGAAGAATCTGGACCTTTGAATCGTTTTGCACCGGCCTTGGTCTACCTGCCAGTTAAGGCAAGAGTCAGTGGCTCTCTCACAGCATCTTTCACCTTGAGTCCTGCGTAA
Protein Sequence: MTSTVAQEIRLPEPTDSELADSDGSSNEDRDARKRLLGEADSSGPKKRRKQATPVRFPTSLMLGDHPESEEEEEDADPEGKPNSPRAEALQGHPTTKDENLNIEFRCQYCSQLFDGKATLDLHLECEHNFVNASHIPSDSQSPQPGSQSQTTVETINQQSDQSLHLPHLPNIEIKNLGPSWFSEHVQSQNHNQNQTQTQTQQQSEEWSANCHMSPITSIPNHLTGLPNFPGGLQQYFPLPPGFTLSDSGQIHRTTLGPAPVRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDPPNPMTMGENNVGVGPLYPIGQMPGNNIKLEPNQKLESGTSVQVPQLQQISQLTQLSQKQQLPQVSQSPQIPQPPPPPTVPCDICHKRFRSEESVRKHKQKVHTASASEDQKNPNHQVQQSSVTDEEREVHHQSPGAMEMLFKQEYGVEQEDNAFMPPPRHLSPQAIQQAKESNFSAERLRRLGVLNPDAFCEICCKEYCNKFTLRTHKMKRHGIVIQDNEKPPLNPGSAATWHQVQTTPLNLIINEAGSGSEYSDRSTDDHECKPCGIRFQNLGLYESHRQRVHADEISPKIEFDSESVEQRITNNDAISEDLQKLQTMILQLNGLETNKISACSVCGKECDSKVSLRIHMMEHGITTEEPASPSQEKSSTPISTYCTLCEKEYPNQEALRKHISEDHKQSCDSTFVPHVPSISMPSTPTSVQASERKTSSLTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIIEEGSNLGNKQENFDPQSTEDTALKPEIGDLNHRYFTHFTEVCPICNRRFRSIKWLKAHLLGDHGKMGIDKWRELEQQYQANQKTNNRLAGTSRPSQLNTPLKIPNGFESSQTKVPDLTATLGNQVLSNLFGSSVEDQQSKSYRCSYCNFATTVLPFLFLHERSHINPQEPATENDKFLQCPLCPQSFSQPEHFHHHLLTRHQFPNILSQFPAPIFNNLRLEAFGEKNSDTKEIEMEPEEQKNPSPQAQNNLNEPSIQKQNDTAVQVTPQGVYKCAQCGYATANLNRIKKHIRKDHKACGEPTESVIAELSKILKEVANKHKVPASYAMPQDLNLNPEKTIMQPFLIEEQQFSPSRDCGTTGGEESGPLNRFAPALVYLPVKARVSGSLTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00011446;
90% Identity: iTF_01389736;
80% Identity: -