Basic Information

Insect: Synergus gifuensis
Gene Symbol: -
Assembly: GCA_904066015.1
Location: CAJFCO010000127.1:170618-180435[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0015 0.21 12.9 2.3 1 21 389 409 389 410 0.96

2 18 0.011 1.5 10.2 0.7 1 23 541 564 541 564 0.98

3 18 0.04 5.6 8.4 0.8 1 23 593 616 593 617 0.97

4 18 0.00027 0.037 15.3 2.5 1 23 616 638 616 638 0.96

5 18 0.031 4.3 8.8 0.9 1 23 643 665 643 665 0.96

6 18 7.7 1.1e+03 1.2 0.3 1 11 829 839 829 843 0.83

7 18 0.07 9.7 7.7 3.2 1 23 870 892 870 892 0.98

8 18 0.03 4.2 8.8 0.2 2 20 898 916 897 918 0.93

9 18 0.0002 0.027 15.7 1.6 2 23 922 943 922 943 0.97

10 18 0.029 4 8.9 0.4 1 23 1128 1151 1128 1151 0.95

11 18 0.00019 0.027 15.7 3.9 1 21 1191 1211 1191 1212 0.94

12 18 0.00085 0.12 13.7 2.0 2 23 1214 1235 1213 1235 0.96

13 18 0.00072 0.1 13.9 0.5 3 23 1239 1260 1238 1260 0.97

14 18 0.22 31 6.1 1.2 3 23 1265 1286 1264 1286 0.95

15 18 0.011 1.6 10.1 0.3 1 23 1293 1315 1293 1315 0.97

16 18 0.006 0.83 11.0 0.2 1 19 1321 1339 1321 1342 0.91

17 18 0.00065 0.09 14.1 1.1 1 23 1352 1374 1352 1374 0.97

18 18 0.00047 0.065 14.5 2.1 1 23 1752 1774 1752 1774 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0015	0.21	12.9	2.3	1	21	389	409	389	410	0.96
2	18	0.011	1.5	10.2	0.7	1	23	541	564	541	564	0.98
3	18	0.04	5.6	8.4	0.8	1	23	593	616	593	617	0.97
4	18	0.00027	0.037	15.3	2.5	1	23	616	638	616	638	0.96
5	18	0.031	4.3	8.8	0.9	1	23	643	665	643	665	0.96
6	18	7.7	1.1e+03	1.2	0.3	1	11	829	839	829	843	0.83
7	18	0.07	9.7	7.7	3.2	1	23	870	892	870	892	0.98
8	18	0.03	4.2	8.8	0.2	2	20	898	916	897	918	0.93
9	18	0.0002	0.027	15.7	1.6	2	23	922	943	922	943	0.97
10	18	0.029	4	8.9	0.4	1	23	1128	1151	1128	1151	0.95
11	18	0.00019	0.027	15.7	3.9	1	21	1191	1211	1191	1212	0.94
12	18	0.00085	0.12	13.7	2.0	2	23	1214	1235	1213	1235	0.96
13	18	0.00072	0.1	13.9	0.5	3	23	1239	1260	1238	1260	0.97
14	18	0.22	31	6.1	1.2	3	23	1265	1286	1264	1286	0.95
15	18	0.011	1.6	10.1	0.3	1	23	1293	1315	1293	1315	0.97
16	18	0.006	0.83	11.0	0.2	1	19	1321	1339	1321	1342	0.91
17	18	0.00065	0.09	14.1	1.1	1	23	1352	1374	1352	1374	0.97
18	18	0.00047	0.065	14.5	2.1	1	23	1752	1774	1752	1774	0.97

Sequence Information

Coding Sequence: ATGGGCGAATCAAGTTTGCAAGATTTTCAGAGATGCCGACTTTGTGCTCTTCCATTTTCTTCAAATTCACTAATTTCTTTCGTCAATACTATCTACGAGCCCATGATTGACAAACTTAGCCCATTTGGACTGAATATAAAGAAAGATGATGGTTTACCGGAGAGTATTTGCAATGGCTGTACCAGTATACTGGCAACATTCATCGAGACAATGGAACTTTTCTTAGAGGCTGACAAAAAGTTTAAAAAACTACTGGAAGCCAGTAAACCAACCAAAATTGAAAAACGTATCCACGAAAGGAGAAAGTCAATAAAAAGCACGGAGGATAAGGAAACAAAAGGATTGAAAAGAAAAGTTGAAGATGAGGTTGTTGAAATCAAAAGAATCAAAAGAAGAGATCATCTCAATCTTTTAAGAAAAATGCCAACTCCAGTCGCAAATCATTTAAAAAACGTGGATGGGAAAATCACAAAAGAAAAATGTAAAGAGATAGCAAACACGAAGAATGTCTTGATCGAGCAAACAGAGATTAAAAATAATGAAAAATCAGAAGTAAGAAAAAAACAAGAAAGAAAGCAAACACTAGAAACGAGAGAACCTGAGAAAGACTTGGAGAATAATATATCCGACCAAGTTACAACTGTAAATGTTACAGAAAAACAAGATCACGACTATAGTATGGATGCTGATTTTAATGTGACTGACAAAATGGGCGCAAAAAATAATTCAAATGATAAAGAAATAGACATTTCACAGGAAAGTGACCTTGAAACTCGAAACAAACAAATTGCCCTTAAAAATGTCAAAATATTAACAATCGATAGAACGTGTTTGCCGGAGAAAGACAAAGTAAATTTACCCGGGACCTCGAACCCTGTCTCTAGAAATTACATCCAACCTTCAGATGATAAAGAAATTGATATTTTCACTTGCTTAGAGTGCCATCAGCTTTCTTGGAACAGAGAGACAACGCTTGAACACATTTACAAACAACACGCAGGAGGTGCTTTGACTTATAAAGCAAGATATATGGTGAAAAGGATAAATCACACAAAAGGTTACAATTCTCGGAAGCAAATTGTATGTATGCTTTGCTATTTCACCTTCTCTGATTCGGATTTCAATTCATACTTAGAACATCTAACAGGACATTATATGGCAATTTATAAATGTGTTCACTGCGCACAAAACTTTTCATCAAAGGAAGCCTTGAAAAAACACAAGCGCTTCTATAAGAATGATATTATAACCTGCAAAATTTGCAACGAGTCTATGGCTTTAGAGTTTTATGCAGGGCATCAAAGAAGTCATTCTTTGAGTTCCCGCACTTTATCAAATATTAAGAAAAAGACATTGAAAAGAAAGAAAAGAAAGCAATTTAAGCAAAGTGAGGAAAAATCAAAAAGTTGTGTTCAAATAAATGCTAATGAAAAAGGAAGAGAAAAGTCGAAAACAGTTGTGGAAAGTGACTTGGAAACAGTGATTTGCGATGGGGAAGTCCAAATAGATGAAAGAGAATATAATGATAATGAAAATTCTAGCAAAACGGACGATGAAATCGAAGAAAAATCTCAAGAAAAATCAAATAACATCACTCAAAAGAAGAGAGATCCGTGTTTCTATAAATGTACAAATTGTCTTCGAATTTTCCAAGATCGAGGTACTATCCTAAAACACATTCAAAGAATCCATCCTCTGATCTGGGGGAATAAAAGGAGTCTTTTGGGAGCTAAAAAATTAAAATCTGAAGACCAAGGAGAAGATGCAAATGAAATTTACATGTGTAGAATTTGTCCGGTTGATTTCGACAATGATAACACGTATTTCCAACATTTAAAAACGAATCATCACTGCAACAAGTGCGCTAAAACTTTCTACGATAAAGAGGAAATGAATAAGCACTTGCGAGCTCACGAAAAGCGATTGCACATATGTGAACTCTGCGATGCAAGTTTCTACGTGGAGAAAAATTATCTGGATCATAAATTGACCCACAATCACAATTGCGAACTCTGTGCTGAAAAATGCTCAAAATATGCTGAGAAATATGAACTAGGTTATGAAATAAACACAACAAAAATAAACGTCTTTTTTTATCATAGGAGGTTTGACATTTTAGACATTATGAACGACCCTGGAGAAGTGGAAGACATAATAGAAATAGAAAACATCAAGCCAGAACCGCAAATAAAGCAAGAAGTAGATTTGTCATGCAATGAAGAATTTGACTACATTTTAGGCGAAGAGCCCATCAACAATAATCTTGAAATAAATGGATTGGAAACCATTACCACTCAGGTGGAACCACTAAGTGTCGAGGATGATTCTCAAAATACGAGTGAAAAGTATTTTATACTCACGGAAAATCCTTTCTGCGATATACAAATTGCAAATATTAGTTACACCAGGAATGCAGAAGTCTATGAGTTGAGCAACCTAGAAGTGGAAGAATCGATTCCTGAAAACCCGATCGACAAAATTTTATTTCAATGTGAGAATTGCAATAGGCCAAGTAAATACCTTAAAGAACACAATTATGCGAAAGTGCCCAACCGACTAAAAGAAGTTATAGAAAACGAGGAATTGAAAAAAAATGTCTATCAAACTTACTCGTGTAAATTCTGTCAATATGTTCGAATCAATCCACATAAATATTTAATACATATGCAGAGACATGAATCGGAAGTCTGCTCCTGTCAATCCTGCTCTGAAATTTTTACAGTCTCTGACTTATTAAAAGTCCACATGGTCATTAACTTTCGCACTTGCGAATTTTGTCAAAAAGTATTTACGCAAGAGAAAGGTTATAGGAAGCATTTAAAAATTCATTTTCCGGTATCGAAGAAAAAAGTCAATGCAAAGAAAAATTCAAGTTCAGAATTTCAGACTGGAAGATTTGAAGAAATCACGATACAGGAAGAAAATCATAAAATTGATCCAGAGGTGGAAAGTGCTATGAAAAATAAGGAAATCCTGTCAATTACTAGAGAAAGTAATGAAAATGATAAAGAAGAGTTCGACACATTCGTAGAAGATAGGGAAAACCAAGAGGAAGTAGAAGATATTGAAAGTGATACAGGAAAGCCTGACACTTACCAGAAATCTTTCTCGCAATATCTAAAAAATTTAAACGATTCAGGAAATGAAAATGTCATTCCAAAAAATCGAAAGTTAAAGCGGAATAATAAAACGAGTATCAAAGAGAGTCTTCCAAAGAAGAAGAGAAAAGAAATTTCTACATCAATATCATCTACCGAAGAAATCCAAGAAATCTGTACAATAGCAACTCCAAGACGACTCACTCCACCCGAAAACTCGGAACATCCCTTTTCAGTCGAAAAATTCATTCCATACAATAAAATAGAGAAAGAAATCTTTCTCTTCGAGTGCGCAAGGTGCGGACGAAATTTCGTGAGCAGGAGGGCAATTTTAGAACACTTGACAAAAAAACACAGCGACGAATTTAGACTTTGGGAGACTCTATACACAAAAAGGAAGTTAGAAGATAAAAAACCGAATGTGAAAAAATTTAATAATGCATCAATGTACTCGGATCATTTAAAAATCCAGTACGTCTGCAGCAACTGTGATAAAACATTCTCAAGTAAAAATCTCCTCAAAACTCACAAATGTAAATTAATCTGTCGTCTTTGCGGCAAACACTTCGTTTTCAGAAATAATTACATAGAGCATTTAAAAACACATGAAAATGATTGCGAAATTTGCAAAAAGCAATTTATTTCAGAATCGTTTTTAACAATTCACCGAAAGTCTGCTCATCCCGAAGGAATATGCTACGTGTGTCACAGGTGGTTTTCTTCAGAGACTCTTTTAAAAGATCACAAGAAAATCATTCATAATCTTTCTGTAATGACTTTTTTTTGTTTGATCTGTGAAAAAAACGTTTATTCGGAGCAAGCATTTCGCGCCCATATGGAAACTCACGGCAATAAACGTCCTTTTCCCTGTCCTCATTGTGGGCGATCTTACGCTCGTTATTTTGCAATGGCATCACACAGTGAAAGATGCGAAGAATTCGATGAAACCAACGTCTTTGAGTGCGATATTTGTAAGAAAGCATTTTACAATAAAGAAAAATTCATACCTCATATGAAACAGCACATTGAGATGAACAAAATCTTGGAGGACGCTAAAGTCAAAAACGAAAAAGTTCAGAAGCCTGTATCGAATACACAGGTTTCGAAGGACATATTGCAGGACATTCCGAGTTCTAAGCTGAAGGATTCACAGAATTCTGAAAAAAATAAAGTCCTTTCAACTCCGTCTTTGAAAAATAAGAATTTGAAAAGTTTACACTTCGGTCCGAAGATTGTTTGGCGCGAGAGTACAATACAAACATCTTTAGTCAACAAGCTTGAAAAAAGATACGAAAGACAGGGAGAAAAAAAAAAAAATAGGAATTTAACTGATGGACCCTTGCTTAGAGATAAAAGTTCGGATCATTGTTCTGGAATGAGATTTGAGCTAAAGAAAAGGATGGAGATGATGGAAATTAAGCAATCAGAAAACAATACATTTTTAGTTCCTAAAGAAAAGCCAGCGGGGGGAAGTTGCGAAGAACAATCTATAGAAAAGCTTTTAATACTGCGACCGATCACTAGAGTGACAAAGGAGGGAAACTTCGAGAGTGTAAACGAAAATATAAAATTAGACGCGAGTTTTCAAGAAAAGTTACAAAAAAATAATTCCACGTTTAATTTAGTACCGGTGAGGTTTCAAATCGATCAATTGAATTTAGAAGATCCTGTAGTCGATTATGTTAGTGAAATTATAAATTCAACATCAGATAATGAATCTGACCCGCTCGCCTTGGCAAATTCATCACTTGAGAATGATGAATCCGATCCGTTGGCTTTAGAGAATCCTCCATTAGATTCTAGAGCGGATTTGGAAATAATAACTGAATTTGAAAGTCAAGATTTTGAAACTAAAGGTTTGGAAAATAAAGATTCTGAAACTGAGAATTCTGAAATTAAAGATTTTAAGAAATCGTCAATGAGTACAAATGAACATGTTCCGAAATTGCGATATTTCACACGAAAAGCACCCAATGTTGTTATAATTGAAGAAGGTGAAAGTAAAATAGACTTGTTACAGAAAAAGAATGATTCGATAAATTCGAGAGAGGTCAAAAGGATTGGAAGTTCATTTTTTTGTACAATATGTAAAAGGCAAATTTTGTTGCGTTTGAAAGTGGAGCACATGAAGATTCATGACGATGGTTTGAAGATGTTTGAATGCAGCATATGTGAAAAAAAATTTAATACCCAGGCGAGTAGAAGAAGGCATGAATTTACTCATACGAAAAAGCTAAGCAGTAGTTCAGCTCAGAATAACAAGTGTGATAACTGA
Protein Sequence: MGESSLQDFQRCRLCALPFSSNSLISFVNTIYEPMIDKLSPFGLNIKKDDGLPESICNGCTSILATFIETMELFLEADKKFKKLLEASKPTKIEKRIHERRKSIKSTEDKETKGLKRKVEDEVVEIKRIKRRDHLNLLRKMPTPVANHLKNVDGKITKEKCKEIANTKNVLIEQTEIKNNEKSEVRKKQERKQTLETREPEKDLENNISDQVTTVNVTEKQDHDYSMDADFNVTDKMGAKNNSNDKEIDISQESDLETRNKQIALKNVKILTIDRTCLPEKDKVNLPGTSNPVSRNYIQPSDDKEIDIFTCLECHQLSWNRETTLEHIYKQHAGGALTYKARYMVKRINHTKGYNSRKQIVCMLCYFTFSDSDFNSYLEHLTGHYMAIYKCVHCAQNFSSKEALKKHKRFYKNDIITCKICNESMALEFYAGHQRSHSLSSRTLSNIKKKTLKRKKRKQFKQSEEKSKSCVQINANEKGREKSKTVVESDLETVICDGEVQIDEREYNDNENSSKTDDEIEEKSQEKSNNITQKKRDPCFYKCTNCLRIFQDRGTILKHIQRIHPLIWGNKRSLLGAKKLKSEDQGEDANEIYMCRICPVDFDNDNTYFQHLKTNHHCNKCAKTFYDKEEMNKHLRAHEKRLHICELCDASFYVEKNYLDHKLTHNHNCELCAEKCSKYAEKYELGYEINTTKINVFFYHRRFDILDIMNDPGEVEDIIEIENIKPEPQIKQEVDLSCNEEFDYILGEEPINNNLEINGLETITTQVEPLSVEDDSQNTSEKYFILTENPFCDIQIANISYTRNAEVYELSNLEVEESIPENPIDKILFQCENCNRPSKYLKEHNYAKVPNRLKEVIENEELKKNVYQTYSCKFCQYVRINPHKYLIHMQRHESEVCSCQSCSEIFTVSDLLKVHMVINFRTCEFCQKVFTQEKGYRKHLKIHFPVSKKKVNAKKNSSSEFQTGRFEEITIQEENHKIDPEVESAMKNKEILSITRESNENDKEEFDTFVEDRENQEEVEDIESDTGKPDTYQKSFSQYLKNLNDSGNENVIPKNRKLKRNNKTSIKESLPKKKRKEISTSISSTEEIQEICTIATPRRLTPPENSEHPFSVEKFIPYNKIEKEIFLFECARCGRNFVSRRAILEHLTKKHSDEFRLWETLYTKRKLEDKKPNVKKFNNASMYSDHLKIQYVCSNCDKTFSSKNLLKTHKCKLICRLCGKHFVFRNNYIEHLKTHENDCEICKKQFISESFLTIHRKSAHPEGICYVCHRWFSSETLLKDHKKIIHNLSVMTFFCLICEKNVYSEQAFRAHMETHGNKRPFPCPHCGRSYARYFAMASHSERCEEFDETNVFECDICKKAFYNKEKFIPHMKQHIEMNKILEDAKVKNEKVQKPVSNTQVSKDILQDIPSSKLKDSQNSEKNKVLSTPSLKNKNLKSLHFGPKIVWRESTIQTSLVNKLEKRYERQGEKKKNRNLTDGPLLRDKSSDHCSGMRFELKKRMEMMEIKQSENNTFLVPKEKPAGGSCEEQSIEKLLILRPITRVTKEGNFESVNENIKLDASFQEKLQKNNSTFNLVPVRFQIDQLNLEDPVVDYVSEIINSTSDNESDPLALANSSLENDESDPLALENPPLDSRADLEIITEFESQDFETKGLENKDSETENSEIKDFKKSSMSTNEHVPKLRYFTRKAPNVVIIEEGESKIDLLQKKNDSINSREVKRIGSSFFCTICKRQILLRLKVEHMKIHDDGLKMFECSICEKKFNTQASRRRHEFTHTKKLSSSSAQNNKCDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01392294;
90% Identity: -
80% Identity: -