Basic Information

Insect: Synergus gifuensis
Gene Symbol: -
Assembly: GCA_904066015.1
Location: CAJFCO010018408.1:176122-185370[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.13 18 6.8 0.6 1 19 355 373 355 373 0.98

2 19 9.9 1.4e+03 0.9 0.4 2 23 399 420 398 420 0.79

3 19 0.0026 0.36 12.2 0.2 2 23 429 451 428 451 0.95

4 19 0.0025 0.34 12.2 0.1 1 23 454 478 454 478 0.91

5 19 1 1.4e+02 4.0 1.8 2 23 492 513 491 513 0.92

6 19 0.0048 0.66 11.3 0.2 1 23 521 544 521 544 0.95

7 19 0.0044 0.61 11.4 2.3 1 23 550 574 550 574 0.90

8 19 0.0018 0.26 12.6 6.5 1 23 658 680 658 680 0.98

9 19 0.0072 1 10.8 1.2 1 23 687 710 687 710 0.92

10 19 0.00012 0.016 16.4 3.1 1 23 716 738 716 738 0.98

11 19 0.00022 0.031 15.5 0.7 1 23 744 766 744 766 0.97

12 19 0.00013 0.018 16.2 0.9 1 23 772 794 772 794 0.97

13 19 0.099 14 7.2 3.8 1 23 807 829 807 830 0.95

14 19 3.7e-05 0.0051 18.0 1.9 1 23 844 867 844 867 0.96

15 19 0.00056 0.077 14.3 0.3 1 23 875 898 875 898 0.96

16 19 4.1e-06 0.00057 21.0 0.6 1 23 904 926 904 926 0.98

17 19 0.00016 0.022 16.0 4.9 1 23 932 954 932 954 0.99

18 19 3.1e-06 0.00043 21.4 0.8 1 23 960 983 960 983 0.98

19 19 0.089 12 7.3 0.2 2 23 990 1011 989 1011 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.13	18	6.8	0.6	1	19	355	373	355	373	0.98
2	19	9.9	1.4e+03	0.9	0.4	2	23	399	420	398	420	0.79
3	19	0.0026	0.36	12.2	0.2	2	23	429	451	428	451	0.95
4	19	0.0025	0.34	12.2	0.1	1	23	454	478	454	478	0.91
5	19	1	1.4e+02	4.0	1.8	2	23	492	513	491	513	0.92
6	19	0.0048	0.66	11.3	0.2	1	23	521	544	521	544	0.95
7	19	0.0044	0.61	11.4	2.3	1	23	550	574	550	574	0.90
8	19	0.0018	0.26	12.6	6.5	1	23	658	680	658	680	0.98
9	19	0.0072	1	10.8	1.2	1	23	687	710	687	710	0.92
10	19	0.00012	0.016	16.4	3.1	1	23	716	738	716	738	0.98
11	19	0.00022	0.031	15.5	0.7	1	23	744	766	744	766	0.97
12	19	0.00013	0.018	16.2	0.9	1	23	772	794	772	794	0.97
13	19	0.099	14	7.2	3.8	1	23	807	829	807	830	0.95
14	19	3.7e-05	0.0051	18.0	1.9	1	23	844	867	844	867	0.96
15	19	0.00056	0.077	14.3	0.3	1	23	875	898	875	898	0.96
16	19	4.1e-06	0.00057	21.0	0.6	1	23	904	926	904	926	0.98
17	19	0.00016	0.022	16.0	4.9	1	23	932	954	932	954	0.99
18	19	3.1e-06	0.00043	21.4	0.8	1	23	960	983	960	983	0.98
19	19	0.089	12	7.3	0.2	2	23	990	1011	989	1011	0.93

Sequence Information

Coding Sequence: ATGAAACTAGAAGATTTCCAAGGGGAAAGACACGTCGATTCGTCGACTAAATCACAAGATTCCAAAGTATGTAGGTTGTGTGGCATGAATACCACGAATTCAGTTGAAATTTTTAGTAAAAAAGATCCTGTTGCACAAAAACTAGATTACGTTCTGCCAATAAATATTTTCAAAGAAGATAATGTACCAGTCATTGTTTGTAAAAACTGTTGCACAAAAATCAACGTTCTTAGCGAATTTACAAATCAGTGTTTACAGAATGAACAAAAACTTTTAGAAGTTGCAACCTTGTTATCTTCTACAGAAAACGAACTTGTAGATACAAAAAAAGATGCCGCAAAATTACAGTTGAAACAAACTTGTCCACATTTTTATGCGAATTTACTCATTCCACAGAATAATGAATCATTTAATTTTCAAAATGATCTTCAGTTTTCGTTATGCGACGATAACGCCTCAAATTTAGAATTGGAAAATATTATTAACGAAGCTATTTCTTTGAATCTAGAATCGGAGAGCATCTTAAACGACATTACAACATTGAATTTAGAAACCGATACAATCTTAAATGATTATGCCAACTCAAATCCGAAATGCGATGATATTTTAAACGAAGCAACCCCTTTGAATGTAAAAGTGTCAAAATCAACTTCTGAAGTTTCAAAACCACTTCATGAAATATCAAAACCAATTTTTGAAGAATTAAAAGAAATCTGCGCAACATCAAAACCAATTTTAGATCAAGAGCTTGAAATTCAATGTACGAGGATTCAAAGTCTAAGTTGTGTCAAACTGACTAATATAGAGATAATGGATGACCTTAACAATGGGGTCAACTTAGAGAAGAAGTCGATTAAGACGAAAAAGCGAAGCCTAAAAGTGAAGAAGAAAAGGAAATCGAATTTGGGATTTCCCAAATCAAAAAAACAACGTAAAGAGATTATTGACTCTTTTCAAAATGAGAAAAAAGACTTGCAATGCTTTTTATGCAATTTAGAATTTCTTTCACGAGATCAATATCTTTTTCATTTAGAGCAGCATAAAAATCGAAACATAAAACAATTTACTTGCCAGAAATGCAAAATGGATCTGAGCACTGAGGATGATTTGTGGCATCACTGTGAAAATTTCTGTCTTCCAGGTAAAATTACAAGTTTAGAGGAAGGTTCTGATTTTAAAGCAGAAGATAAATTAACTTGTGAAATTTGCCAAGCATTGTTTATTCAGAAGGAGAGATATGACTTTCATATGCAGTTCCATACAAAGAGAGATTTTGATGTTTTAAAATGTCCCCAATGCAATAAAATATTCCAAACTGAAACCGTCCTTTGGGATCATTATCAGATTGAACACAAACATTTTTCATGTGTTGGATGTGACAGAATATTTGGAAGGAAAGCGAGTTTAGATTATCATTTGAAAATATCGGGTCACTCAAATGTTAAGAAAAATTTAGAAGAGGATAACTTGATAACTTGTGCCAAATGCGGAGCTCGATATCGTCACCAGGAAAGATACGAATTCCATGTGAAAAGACATGAATTAGGAAAAATAAACCAATTTATTTGTACAGAATGTGAGAAAGAATTCGCGAATGAAAACGTTTTATGGGATCATTATCAGTATACGCACAGAAAAACCGAATGTTTTAATTGTTTAACCTGCGGAAAAGTATTTCTAAAGCAGTATCTTTTAAATAAACACCAACTCAAGTTCAAACATGAGGGCACAAAAATTGAGGTTGAATCAGAGACCAATAATCAACGTTTTCCAGTGGAGAAAAATGGAATGAATTCTCAAATCAAAGATGCCGTCCCACCTAAGTTTCTGGACTGCGTTCTTTGTGGAGAACCAGTTTCAAATGTTGATCCCGATTCTCTGAATGACGTAGTAACTTGTGCCAAATGTAAGACACCTGGACTCTCTTTACAAGTCGATTCTGATGGTGCCAAAGTACTTTCTCGTCGAGAATATCATTGCAATTTATGTTACAAACATTTCTCGACTAAAGATAGATTAGAATATCATATAATGCGTCATTCGGAAAATATGGATGAATTTATTTGCAGTAACTGTGGTAAAAAACTCAGTACCGAACAGGCACTTTTCGAGCATCATCTCTTCGTTCATAAAGGAGCAAGACCTCATGTCTGTGACTTATGTGGTAAATCCTACCAATTTCGAACGAGACTCAGGGAACATATGAGAACGCACAGTGGAGAAAGACCTTTTGCGTGCGAATTTTGTGGCCAGGATTTCATGACGAACAACTCTTTACGCTCTCATGCAAAAACCCACCTCGACGATAAGAAATTTCCTTGCCAACTCTGTTCAAAGCTCTTTCGACGTCAGCAGGACTTAAATGAACACCTGGAACGTCACTGGAAAAACGACAAATCCCTAAACTTATCTAGATTCTTCCACTGCGAAAATTGTTCCGAATTTTTTCCAACTATTCGCGTTTTAAAAACCCATTTAAAAGAGCACCACGGAATTGAAAATGAAAATCTTACTGATCTCCAACCTTGGTTCGAGTGTGAAGACTGTCCAGAGAAATTCAAGCACCAAATGTCCCTGAAATCTCATAGAGAAAAAGTCCACAAGGGGAAAACTAAACCAGTTTATCGTTGTGATAAATGTGATATAATTTATAAAACGGCGAGGCTTTTGGCAAGTCACGTAAATAATAATCATGGAGGGGGAAAAAGATACAAATGTGTCCAATGTGGAAAGGAATATAATCAGTCAAAGTCCTTACAAAATCATATTTTGATTCACACTGGTGAAAAACCATTTAAATGCGAAATTTGTGAAATGACTTTTAGGACCAGGGAGTCTCGAAATCATCATCAGAGAAAACACACTGGGGAAAAACCTTATAAGTGTCCAGGATGCGATAAAACTTTTGCCACTGCTGGACAGAGAAGAGAACATAGAAGGAAAACTCATGAAGATGGAAACGAACTGCCTTGTCCTGAATGTGGTAAAATTTGCTTTGGTGAACGCGGAGTTCGTAGTCATTTGACTATTCACTCAATTGAGAAGCGCAAAATGCTAGCTTTGAATTAA
Protein Sequence: MKLEDFQGERHVDSSTKSQDSKVCRLCGMNTTNSVEIFSKKDPVAQKLDYVLPINIFKEDNVPVIVCKNCCTKINVLSEFTNQCLQNEQKLLEVATLLSSTENELVDTKKDAAKLQLKQTCPHFYANLLIPQNNESFNFQNDLQFSLCDDNASNLELENIINEAISLNLESESILNDITTLNLETDTILNDYANSNPKCDDILNEATPLNVKVSKSTSEVSKPLHEISKPIFEELKEICATSKPILDQELEIQCTRIQSLSCVKLTNIEIMDDLNNGVNLEKKSIKTKKRSLKVKKKRKSNLGFPKSKKQRKEIIDSFQNEKKDLQCFLCNLEFLSRDQYLFHLEQHKNRNIKQFTCQKCKMDLSTEDDLWHHCENFCLPGKITSLEEGSDFKAEDKLTCEICQALFIQKERYDFHMQFHTKRDFDVLKCPQCNKIFQTETVLWDHYQIEHKHFSCVGCDRIFGRKASLDYHLKISGHSNVKKNLEEDNLITCAKCGARYRHQERYEFHVKRHELGKINQFICTECEKEFANENVLWDHYQYTHRKTECFNCLTCGKVFLKQYLLNKHQLKFKHEGTKIEVESETNNQRFPVEKNGMNSQIKDAVPPKFLDCVLCGEPVSNVDPDSLNDVVTCAKCKTPGLSLQVDSDGAKVLSRREYHCNLCYKHFSTKDRLEYHIMRHSENMDEFICSNCGKKLSTEQALFEHHLFVHKGARPHVCDLCGKSYQFRTRLREHMRTHSGERPFACEFCGQDFMTNNSLRSHAKTHLDDKKFPCQLCSKLFRRQQDLNEHLERHWKNDKSLNLSRFFHCENCSEFFPTIRVLKTHLKEHHGIENENLTDLQPWFECEDCPEKFKHQMSLKSHREKVHKGKTKPVYRCDKCDIIYKTARLLASHVNNNHGGGKRYKCVQCGKEYNQSKSLQNHILIHTGEKPFKCEICEMTFRTRESRNHHQRKHTGEKPYKCPGCDKTFATAGQRREHRRKTHEDGNELPCPECGKICFGERGVRSHLTIHSIEKRKMLALN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01392220;
90% Identity: iTF_01392220;
80% Identity: -