Basic Information

Gene Symbol
Snapc4
Assembly
GCA_904066015.1
Location
CAJFCO010000137.1:204053-206721[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.39 8.2e+02 1.0 0.1 3 16 175 188 173 190 0.92
2 6 0.68 1.4e+03 0.2 0.0 13 43 223 258 221 261 0.76
3 6 1.4e-05 0.029 15.3 0.3 3 44 269 312 267 314 0.93
4 6 9.1e-10 1.9e-06 28.6 0.4 2 43 321 366 320 369 0.95
5 6 2.7e-13 5.8e-10 39.9 0.0 1 44 375 419 375 421 0.93
6 6 2.8e-12 5.9e-09 36.7 0.2 4 44 428 468 426 470 0.95

Sequence Information

Coding Sequence
ATGAGTGATACAGAGGATCAGCTTATCCTCGAGGACATCCGAGCATTGGAAGATGCTTTATCCCGTACAAATGCACCACGCCCTATACATGAAGTTTCGCTCAAAAAAGAAATTATACTTTCCAACGATCGACCTTCGCAAGAAGTCAAAATCCATTCAATCAATCATTTTCCAACCTCAGTATCTGTTCCAGTCAATAACGAAGAATGCAGCGAAAATCCCATTGAAGAGACTACAAATTCTCTCAGTGCATTAGAACTTAATCGAAAGCTAATTGAACATCTGATCGCTACTCGTAGCGAAGTCGCTGCAATTCTCGATGAATGTAAAAGAAAAAGGGAAGATGTCAATGTAAAAATTAAACAGCGTTTAAGAATGCAACCAACTAAAAGAGTTTTATCTTCGCATGCTGGTATGCCTTACTTCAAGGATAAAAATTTTTTCATGGCTCCTGAAAATGAGGACACGAAATTAAAAAAAGCTAGAGGCGAATTGCAAATAAACAACCTTCGACGTGTCTCTCGCTGGACAGTAAAAGATAAGGAGACTCTTCTGAAAGCTATTTACCACGAAGTGCTCTCCAACTTGAAGAATCTTAATGAAAAAGAGATGGATTCGGTTGAAAAAATGACTTTGAGGAAGACCCACTCTTTGCCAACTTTTGTTATAAATGCCATTGGACATCTAGGAGAGAGAGAATTTGATTGGATGAAAATTGCTGTGACAGACTTTCAAAATAAACATTCTGCAGAAGAATGTCGTGTTATGTGGAACGTTTTTTTGCATCCCGATATTAATAAGTTCAAGTGGAAAAATAAAGAGCTGTCTAATTTGCATAATCTTGCCAAGAACTATAAATATCAAAACTGGTCTATGATTGCCACGGATTTAGGTACTCAGAGAAGCGGCTACCAGTGTTTTGTCAAATACAATACAACCAAAAAATCTCAGGATAATGAAAAACCTTGGATTAAAAAGGAGGATAGAAAGCTAATACACCTTGTGAACAAATTCAAAATCGGTGACTTTATCAACTGGGGAGACGTCGCAAGCTGTGTAGAAAACCGTACTAAACAGCAAATTTACTTTCGTTGGATGTATAGTCTCGCCCCTCACATAAAAAAGGGCAGATTCACCGATGAGGAAGACAAACTTCTAATAGACGCTGTTGATAAGTACGGTACCAATTTTAAAAAAATATCTACCCTCGTCCTACCAGCTAGGACTTCCGCCCAGCTCAGCGATCACTATAACACCATCGTCAACAAGGACCTAAACATTTGGACCCTCCAACAAGACACCCATCTTGTCGAATTGTATAACGAACACGGAAACAACTGGGCCAAGATATCAACTTTATTTGAAGGCAAAAGCAGAGTTCAACTTCGTCATCGATATTCCTCCATCCTTCGATATCAAAAAAGAGGAATTCCACTTAATGAAATTCCTCGGAATAATTTTCAAAACAAAGTAATAAAGCAATCTCTCGTATTTCATAAAGTGCCTAGAAACATTAAACAAAATCAACCTCAGAAAGTTAACGAGGTAGACAAGGAAATAATCGAGTATTTTCACAAACTCAATGCTGTTCCTACCAAAGTTGGTCGTAAGCAAAAGTTTTATCATCCAAATGAACTTGACATTATCACCAAGAAAATGTACAACATTCTTGAACTGTTACATGCAAAACTGAATATTCCCTACGATTTAGACGAATACGATTGTTTGTCTGAGAAAGACAAGCAGCTTTTAAATTCGCTGAAAAATCTACCTAAAAGTGCAGTGGGTAGATCATTTTCCAGACATGTGGAACAAATACGAGTTACTATGTTTGGGCCTGATCAAAATGAAGAGAATCATTTTGTACCGCCTTTGCCGTATGGGACTCTTTCGAAGGGAGATAATATTCATCAAATGATAAACTACAGTCTCTTCATCGACCAAAAGTTTTTTCAAGAACGAGAAATGATCATCAACACACCTTACAATATCATCGAACCAATCGGTGAAGATGTGAATTATGAATTTGACAAACTTGGCGAGCTGCTTACCAGAAAGTATTACAAATTTGAGAATCAACTTATAAATAGTATTTATGTATTAACGCCTGATAAATTGGCGAGGAGGGAAATGGCAAATCGAAACAAGGCTGTACGGAATTATTATTTACCAAGTACCTCGAGTGTTTCAAATTCAGATGTCATGGTTCTAGGTAATTATAAAAATTACTCTATGAGTAATGATTACGAAGTAAATCAATTCCCTTCGATGAAACCAAATTTTTGGACGTTACGTGGATATCAAAAAATTCTCGATGTAATCAAAGAAATAAATTCGGACGATAATGCAATCGATTGTCTGGTACCTAAGATGAAAATGAACGAGAGTGGAAAACAAGCTTTAGAAATGCTGAGAATGCGGTTGATTCAATTATTTAAGTACCCTGTTATTATGTCGCAAGTCATGCCACCGGAGTTTTTCCAAGAAGCACAAGAGATTTTGAACCAGGGAGCTAAAAGGAAAAGTGAATCTATAAACACTAGTAAATCTGGGAAAAAGAAAAAGATTCAAGAGGATGATACATAA
Protein Sequence
MSDTEDQLILEDIRALEDALSRTNAPRPIHEVSLKKEIILSNDRPSQEVKIHSINHFPTSVSVPVNNEECSENPIEETTNSLSALELNRKLIEHLIATRSEVAAILDECKRKREDVNVKIKQRLRMQPTKRVLSSHAGMPYFKDKNFFMAPENEDTKLKKARGELQINNLRRVSRWTVKDKETLLKAIYHEVLSNLKNLNEKEMDSVEKMTLRKTHSLPTFVINAIGHLGEREFDWMKIAVTDFQNKHSAEECRVMWNVFLHPDINKFKWKNKELSNLHNLAKNYKYQNWSMIATDLGTQRSGYQCFVKYNTTKKSQDNEKPWIKKEDRKLIHLVNKFKIGDFINWGDVASCVENRTKQQIYFRWMYSLAPHIKKGRFTDEEDKLLIDAVDKYGTNFKKISTLVLPARTSAQLSDHYNTIVNKDLNIWTLQQDTHLVELYNEHGNNWAKISTLFEGKSRVQLRHRYSSILRYQKRGIPLNEIPRNNFQNKVIKQSLVFHKVPRNIKQNQPQKVNEVDKEIIEYFHKLNAVPTKVGRKQKFYHPNELDIITKKMYNILELLHAKLNIPYDLDEYDCLSEKDKQLLNSLKNLPKSAVGRSFSRHVEQIRVTMFGPDQNEENHFVPPLPYGTLSKGDNIHQMINYSLFIDQKFFQEREMIINTPYNIIEPIGEDVNYEFDKLGELLTRKYYKFENQLINSIYVLTPDKLARREMANRNKAVRNYYLPSTSSVSNSDVMVLGNYKNYSMSNDYEVNQFPSMKPNFWTLRGYQKILDVIKEINSDDNAIDCLVPKMKMNESGKQALEMLRMRLIQLFKYPVIMSQVMPPEFFQEAQEILNQGAKRKSESINTSKSGKKKKIQEDDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01392694;
90% Identity
iTF_01391893;
80% Identity
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