Sgif029723.1
Basic Information
- Insect
- Synergus gifuensis
- Gene Symbol
- lola
- Assembly
- GCA_904066015.1
- Location
- CAJFCO010000089.1:572462-575711[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-08 1.2e-05 25.7 0.1 9 40 393 425 392 430 0.87
Sequence Information
- Coding Sequence
- ATGGAGGACGATCAACAGTTCTGCCTAAGGTGGAACAATCACCAAACTACCTTAATACAAAATTTCGACACGTTACTAGAATCCGGTACCCTAGTGGATTGCACCTTAGCGGCGGAGGGGAAGTACCTAAAGGCCCACAAAGTCGTCCTCTCCGCGTGCAGTCCTTACTTTGAGGGCCTCCTCAGCGAACATTATGATAAGCACCCCGTTTTCATACTCAAAGATGTTAAGTTTAAAGAACTAAAAGCCATGATGGACTATATGTACAGGGGAGAAGTGAATATCTCCCAAGACCAATTGGCAGCCCTCCTTAAGGCCGCAGAGTCTTTACAAATCAAAGGCCTCTCGGAAAGTAGAACTGGTGGCAACGGTTGTCCGAAACCAGACACCAGGCAAACTAAAGTCAGCTCACAATCGACGGCTCCGTCGTTAGACATTCCACATGCGTCTTCCGGTCTCACTATAGAAAAGAACAACAAAGTTCCTAGGCAGAGTTTGGCACAGAGCTCTGTAGGTGACCTACCTGAAGATTCCGCCAGCCCATCCATCCCCAAAGGTCTCTCCTCCAGGGAAGGTTCACAAAGTCCAGTCTCAAGGAAGAGAAAAAGACTTAGAAGAAGAAGCGTCGGGGAAGATAACTCAGTAGAAAACCATGAATCCAACTCTAGTGATATGACCCAAGCCAATGTCCCTGCGATGGGAATCGCCCCTGTTGCTGATGAGAAGTCTCATGCCGACCCTGCCGACTCACTTGGCCGATCGGCGCTCATGCAACAGTTGACGAAACCTGCCGACGAACTTCTTCAACTTCCAGTTGAAAAACCCGAGCCTACCGAAGACATGATTCAACCAAAGTCTGAGTATATGGACGACCCGGAGGAGAGTGTGGAAGACTTAACGTTAGATGATGATATGAATGACCTCAATGAAATGGAAGATAGTAATAGAGCTGGACCAAGTACGCATGATCCTTCACAACATCCTGGTGGGGGGGCGGGAGCACGGTGTCGGTCAAGAGGGAATTCGGGTGGTGTCATTTGGGCAACCCATTTCCTCGATTATAAAAAAGGGCCGAATCCGAGACGTTTACCACCAGATGTTGACGTAGGCGCGTTGCTTAAGTCCTTGGCGAGCAAGCAGGGTCGAAAATATAGTTTAGATTCGGTTAAAATGTCCCTGGAGGCCATTTTGCAGCAAGGTGTGAGTACAACTCAAGCTTCCGAGATGTACGGCATTAACCGGTCAACACTGCAATTCTATTTGAAAAAATTGAACGTAGTCAGGAGACGATGGATTCAACCAAACGCCCCCGTTCGACACAGACAATCCTAA
- Protein Sequence
- MEDDQQFCLRWNNHQTTLIQNFDTLLESGTLVDCTLAAEGKYLKAHKVVLSACSPYFEGLLSEHYDKHPVFILKDVKFKELKAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSESRTGGNGCPKPDTRQTKVSSQSTAPSLDIPHASSGLTIEKNNKVPRQSLAQSSVGDLPEDSASPSIPKGLSSREGSQSPVSRKRKRLRRRSVGEDNSVENHESNSSDMTQANVPAMGIAPVADEKSHADPADSLGRSALMQQLTKPADELLQLPVEKPEPTEDMIQPKSEYMDDPEESVEDLTLDDDMNDLNEMEDSNRAGPSTHDPSQHPGGGAGARCRSRGNSGGVIWATHFLDYKKGPNPRRLPPDVDVGALLKSLASKQGRKYSLDSVKMSLEAILQQGVSTTQASEMYGINRSTLQFYLKKLNVVRRRWIQPNAPVRHRQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00089692;
- 90% Identity
- iTF_01393655;
- 80% Identity
- iTF_01390438;