Sgif023214.1
Basic Information
- Insect
- Synergus gifuensis
- Gene Symbol
- lov
- Assembly
- GCA_904066015.1
- Location
- CAJFCO010000086.1:1228652-1231217[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-18 4.9e-15 55.8 0.0 1 44 432 475 432 476 0.96
Sequence Information
- Coding Sequence
- ATGTCGAGTGTCGAGGAGAGTCCTGACGGGATGGCATTACAGTCACATTATTCCCTTCGATGGAATAATCATCAAGCCCATATTCTACAGGCTTTTGAGGCACTTTTACATGCTGAAATTCTCGTGGACGTGACCCTAGTATGCTCAGAAAGCAGCATAAGGGCGCATAAGGTCGTCCTCAGTGCCTGCAGCCCATTCTTCGAAAGGATATTCGCCGAGCATCCTTGTAAGCATCCAGTAATAGTGTTAAAAGATTTTCCGGGTCGCGAGGTAGCCGCCTTGATCGACTTTATGTATCGTGGTGAAGTTCGCGTGGGTCGCGAAGAACTTCCGGGTTTGATGCGAGCCGCCGAAAGTTTACAAGTTCGAGGTCTTGCTTCCTCCGAACCAAGACCAGCTAGTCCACCGGAAACACCGACCACGGATCTTTTGGGGGAGCCGTCAACACCAGAAGGTGTGAGACAAGGAACACCAGAAGAGGACGACAACGTCTCGGAAAGTACGGCACCAGCCAGCAGAGATATTTTCCCTAGGGACCACAGGTTACCTCACATGAGCCACCTGAACTTCTCCTTGAGAGAACTCCGAGACTCTTGCGGATCGCCCCTAATGCCGAGAAGGAAGCAAGCCAGGCCGAGGAGAAGGTCCGGCGAGTTGAGATCCGTTTCCCCTTCCGGTGTAACTGAACACAACATCAAGACAGAAAGCGAAGACGCCAGCAGCCCCAGAGGATCTCCTTTAACTGGTACCAGTCTTCATGCGGAGGGATCGCTACCTGATCTACCACCCACGAGTCTTCCCAGCATGTCGGCGTTATCCCTAACCCCGCCACATCATCAGAGTGAGTACCTGACAAGTTTGGGACAACTAGCGGCACAGTGGCTCCCAAATCACCCCCAAAGTCAACTCCACAGTCATCATCCCCGGGAAGACAGCCCACACAACAGGTCTCATCATCCCTACCAACAAGACTCTTCTTTAACTCCAAGAAGATCAGTCGCAGTTTTTCCTATGGATGGAGTCTCTCCCCTAGGAGGTAATGTTGGACTTTTCTCTCATGGGGCTCTAGAAAGAGGATCGCTTTTGGCTGATCTCCACGATAGCTTTAAACCCGAAACCCTACATGGTCTTTTTAGCGGAGCCAACCTGGGCCACCATCCAGGGAAAAAACCGAAGAAGCACCGAAGTGATGGAGATGGACCCAGAAGGTGGAGTGAACACGGACGTGGTTTGCCAGTTGGTAGGCCTAAGGGACAACACAGTGCACCAAGAGGTGGTCCTCCTCGATCATGGACCAATGCTGAGCTCACCGAAGCTCTTCAGCATGTCTGGAACAAGAAGATGACTACTTCTCAAGCAAGCAGAATTTTTGGAATTCCTTACAACAGTCTGCTGATGTATGTAAGAGGGAAGTATGGAAAGAGTCTGAAGCTAGAACAACTCAGAAGGGACTGCACTGGTGCAACGACTGGCGAAGTGATGAATTCGTTAAACAACAATGTCAAAGCTGCCGTCCAACCACCCCAAATGCCACATCCACTTTCTGGCATGCCACACCCTGCCGATGACAACCCCTTCCCACATCATCCACTCCTGGGTGGCAACCTTCCTCAGGGATTCTTCCCGGATTTTGGTACGGCCTTCCCAGTTCCCGTTAGTATGGTTCATCTCTTGCCGCCTAGTGAACAGAAGGCATATGAGCCACCGAATTCAACCAGTGGGGGAAACTGTGGTAACAGTGGTGCCAGTAGCGAGCGTACCACGAGAAGTAGATCCCCGTCACCGATGCCAACTAACCACGAGAGTATCCCACAACCTCCGCAGTCAGCGCCAGCGCTACTCCAGCAAAATGGAGCTAATTAG
- Protein Sequence
- MSSVEESPDGMALQSHYSLRWNNHQAHILQAFEALLHAEILVDVTLVCSESSIRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFPGREVAALIDFMYRGEVRVGREELPGLMRAAESLQVRGLASSEPRPASPPETPTTDLLGEPSTPEGVRQGTPEEDDNVSESTAPASRDIFPRDHRLPHMSHLNFSLRELRDSCGSPLMPRRKQARPRRRSGELRSVSPSGVTEHNIKTESEDASSPRGSPLTGTSLHAEGSLPDLPPTSLPSMSALSLTPPHHQSEYLTSLGQLAAQWLPNHPQSQLHSHHPREDSPHNRSHHPYQQDSSLTPRRSVAVFPMDGVSPLGGNVGLFSHGALERGSLLADLHDSFKPETLHGLFSGANLGHHPGKKPKKHRSDGDGPRRWSEHGRGLPVGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATTGEVMNSLNNNVKAAVQPPQMPHPLSGMPHPADDNPFPHHPLLGGNLPQGFFPDFGTAFPVPVSMVHLLPPSEQKAYEPPNSTSGGNCGNSGASSERTTRSRSPSPMPTNHESIPQPPQSAPALLQQNGAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980290;
- 90% Identity
- iTF_01391007;
- 80% Identity
- iTF_01390463;