Basic Information

Insect: Synergus coniferae
Gene Symbol: zfh1
Assembly: GCA_032164275.1
Location: JAUEJJ010000004.1:7974795-7985834[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.2 25 6.2 1.1 2 23 82 104 82 104 0.91

2 7 2.3e-05 0.0029 18.6 0.6 2 23 123 144 122 144 0.97

3 7 5.5e-06 0.00069 20.5 7.8 1 23 153 175 153 175 0.99

4 7 1.4e-05 0.0017 19.3 1.9 1 21 181 201 181 202 0.95

5 7 8.2e-05 0.01 16.9 4.7 1 23 648 670 648 670 0.94

6 7 1.9e-05 0.0024 18.8 8.1 1 23 676 698 676 698 0.98

7 7 0.0015 0.18 12.9 4.3 1 21 704 724 704 725 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.2	25	6.2	1.1	2	23	82	104	82	104	0.91
2	7	2.3e-05	0.0029	18.6	0.6	2	23	123	144	122	144	0.97
3	7	5.5e-06	0.00069	20.5	7.8	1	23	153	175	153	175	0.99
4	7	1.4e-05	0.0017	19.3	1.9	1	21	181	201	181	202	0.95
5	7	8.2e-05	0.01	16.9	4.7	1	23	648	670	648	670	0.94
6	7	1.9e-05	0.0024	18.8	8.1	1	23	676	698	676	698	0.98
7	7	0.0015	0.18	12.9	4.3	1	21	704	724	704	725	0.96

Sequence Information

Coding Sequence: ATGATTCCACCTGGACTTTATACTGTTGATATAATATACCCTGAACACGATGAGTCATTTGTTACAATTCATAGAAATGCGTTGTTCGCAGTGAATATTCGGCACACCTTCACGAAAGTCCCAGGAGTGGGGTGCAGCGAGGACGAGACAGGTGCGGACGCGGAAGTGGGCGGTTGCGCGGATGGCACGGCCAGTGGAGGTGGTGGAGGCGGCGGAGAAGGAGGCCCGGTTAAACAGGGTGAAAGGTGCCCCCAATGCGGTATCCTCTGTCGGAATTTACACGTACTACAGCTCCATCTCGAGGACATCCATAAGGCGACCTACGCCATCGATAAGCACGACCTCGGCGCACAGTTCTCCCAAGTCtcTTGCAAAGTATGTAGTAAAACTTTTGCCAACGTCTACCGACTACAGAGGCATATGATCAGCCACGACGAGAGCGCAGTacttcgaaaattcaaatgtcCCCATTGCgaaaaagctttcaaattcaaacatcACCTCAAGGAGCATCTTCGTATTCACAGTGGAGAGAAGCCATTCCAATGTAACAACTGCGGCAAACGATTCTCGCACTCGGGGTCCTATTCAAGTCACATGACCTCGAAGAAATGTCTGATAGTGAATCTAAAGAAGTCGAGGCAAGGATCAATCAGTAATGTAGATAGAGGACCGAGAAAGACTCAACCCTCATTGCAAAACCGTCGCGACGTTGACATGATAGCTGCAAATAACAATACTTTCCTGCCTATTCTACCCAAGCTGTCGCCTTCTGATTATCATGATATTCACAGCGAAGGGGGAGgtATGTACGACGTGCCTACGCTGCTTCCGCAAATGATGGGATTCGGAAGTTACTTTCTGCAGTCATCTCtgagaaaattcttaaaccAATTGCACTCAAAGAGACGAGACGATCTATCCGAGCACTATGAATCCCATGGGGAAGTGATGAGTCCTTCCACGGCGGACTCGGAAGGAACTGAAGGAACTGAAGGAAAAGAATCCCCAGCACCAGCTGAATCTCAAGGACTTGATGCCGTTCGACGCATTCTTGAAACCGTCAATACCTCTGTCACTAAACAACTTTTAGAAGCTAATGTTAGAAAACTATCTTCCTCTCCTGCCACCGTCAAGCGAGAATATGATGACGATTATCAGGATCAAGATAGCGAGATCTCGAGTGAAATGGCCCACTATCCTGATTGGCCAATGACAGACCAATGCGACTCGCAAAGCGAGGGTTTGGCAGCGAAGCTTGAAGAGGTAAATCCAAAATCAACGATCAGGCAAGGGTTAAAAAGGAAGGCTGAAGTTGATTCTTCGGAAGCAGATTCTGTGGATGAAGATGAAACGAGCCAACCTCAGAGTGAAAGTGGGAGAAGGGTCAGAGCTAGATCGTTGATAGACGATGAACAATTGGCTGTTCTCAAGGGTTATTATGCCATCAATCCTCGACCCAAGAAGGAGGAAATCATCATGATCGcaaattatattaagtttCCTACACGTGTCGTCCAgGTATGGTTCCAAAATTCCAGAGCGAGAGATCGCAGGGAGTCGAAGATTCCTGCTCTCCTTCCATTGGTGAATGTTGGCACTCAACCGATGAATGAGCAGCCACTTGATCTCTCGAAAAAAGAACTGACTATATCCGTGATAAAAGACAGTGATACTTTAAGTAGAAACACAGCTTCTCCCTGTGGACCAAAAGAGGACATTGCAGTGATGCCACCGACAAATCCGGAAGGCGATGATCTCGAAGACTCCCCTCTTGTTATAGATGAAGAAACCATAGATTCTGCAGAGGTCAAACATACAACTCTGGGCAACGAAGTGTTACCTAAGagtCTAAACCATACACCAGTGAAAGTCGAGGTTGATAGAATAACAATTCAACCAGATATACCTCTAACGACCGAGACGGAACAAGAAGGCCTCTACTTTTGTAATCAGTGCGATAAAACCTTCTCGAAACACAGTTCTCTCGCAAGACATAAGTATGAACATTCCGgacaAAGGCCGTACAAGTGCCAGGAATGCCCAAAGGCGTTCAAGCACAAGCATCACCTGACTGAGCACAAACGTCTGCACAGTGGCGAAAAGCCTTTCCAGTGTTCCAAGTGCCTCAAGCGCTTTTCTCACTCCGGCTCCTATAGCCAACACATGAACCACCGGTACTCTTATTGCAAACCTTACAGAGAATAG
Protein Sequence: MIPPGLYTVDIIYPEHDESFVTIHRNALFAVNIRHTFTKVPGVGCSEDETGADAEVGGCADGTASGGGGGGGEGGPVKQGERCPQCGILCRNLHVLQLHLEDIHKATYAIDKHDLGAQFSQVSCKVCSKTFANVYRLQRHMISHDESAVLRKFKCPHCEKAFKFKHHLKEHLRIHSGEKPFQCNNCGKRFSHSGSYSSHMTSKKCLIVNLKKSRQGSISNVDRGPRKTQPSLQNRRDVDMIAANNNTFLPILPKLSPSDYHDIHSEGGGMYDVPTLLPQMMGFGSYFLQSSLRKFLNQLHSKRRDDLSEHYESHGEVMSPSTADSEGTEGTEGKESPAPAESQGLDAVRRILETVNTSVTKQLLEANVRKLSSSPATVKREYDDDYQDQDSEISSEMAHYPDWPMTDQCDSQSEGLAAKLEEVNPKSTIRQGLKRKAEVDSSEADSVDEDETSQPQSESGRRVRARSLIDDEQLAVLKGYYAINPRPKKEEIIMIANYIKFPTRVVQVWFQNSRARDRRESKIPALLPLVNVGTQPMNEQPLDLSKKELTISVIKDSDTLSRNTASPCGPKEDIAVMPPTNPEGDDLEDSPLVIDEETIDSAEVKHTTLGNEVLPKSLNHTPVKVEVDRITIQPDIPLTTETEQEGLYFCNQCDKTFSKHSSLARHKYEHSGQRPYKCQECPKAFKHKHHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRYSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00883314;
90% Identity: iTF_01393393;
80% Identity: iTF_01389320;